Search results for "Linear algebra"

showing 10 items of 552 documents

Basis set and correlation effects in the calculation of accurate gas phase dimerization energies of two M+2 to give M2+4 (M = S, Se)

2000

The dimerization energies of two M2+ to give M42+ (M = S, Se) were calcd. They depend strongly on the size of the basis set and the correlation method used (ranging from 217 to 522 kJ/mol, M = S) and, therefore, a systematic study of basis set and correlation effects was performed [MP2, MP3, MP4(SDQ), CCSD, CCSD(T)]. The introduction of a second set of polarizing d-functions caused a significant redn. of the dimerization energies, but neither of the above limits is reached by the MPn (n = 2, 3, 4) theory, even with the largest basis sets [cc-pVQZ]. However, convergence was achieved by CCSD(T), compd. methods or hybrid HF/DFT calcns. employing flexible basis sets [e.g., CCSD(T)/cc-pV5Z, CBS-…

Computational MathematicsBasis (linear algebra)M.2Computational chemistryChemistryPhysical chemistryCorrelation methodGeneral ChemistryBasis setGas phaseJournal of Computational Chemistry
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State-specific multireference coupled-cluster theory

2012

The multireference problem is considered one of the great challenges in coupled-cluster (CC) theory. Most recent developments are based on state-specific approaches, which focus on a single state and avoid some of the numerical problems of more general approaches. We review various state-of-the-art methods, including Mukherjee's state-specific multireference coupled-cluster (Mk-MRCC) theory, multireference Brillouin–Wigner coupled-cluster (MR-BWCC) theory, the MRexpT method, and internally contracted multireference coupled-cluster (ic-MRCC) theory. Related methods such as extended single-reference schemes [e.g., the complete active space coupled-cluster (CASCC) theory] and canonical transfo…

Computational MathematicsCoupled clusterBasis (linear algebra)Materials ChemistryCalculusCanonical transformationComplete active spacePhysical and Theoretical ChemistryBiochemistryState specificComputer Science ApplicationsMathematicsWiley Interdisciplinary Reviews: Computational Molecular Science
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Stability and -gain controller design for positive switched systems with mixed time-varying delays

2013

This paper investigates the problems of stability and L"1-gain controller design for positive switched systems with mixed time-varying delays. The mixed time-varying delays are presented in the forms of discrete delay and distributed delay. The purpose of this paper is to design a class of switching signals and a state feedback controller for the considered system such that the resulting closed-loop system is exponentially stable with L"1-gain performance. By constructing an appropriate co-positive type Lyapunov-Krasovskii functional and using the average dwell time approach, we propose a sufficient condition to ensure the exponential stability with weighted L"1-gain performance for the sys…

Computational MathematicsDwell timeExponential stabilityBasis (linear algebra)Computer scienceControl theoryApplied MathematicsFull state feedbackEffective methodPositive systemsStability (probability)Applied Mathematics and Computation
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Integrated dimensional and drive-train design optimization of a light-weight anthropomorphic arm

2012

An approach to minimize the mass of robotic manipulators is developed by integrated dimensional and drive-train optimization. The method addresses the influences of dimensions and characteristics of drive-trains in the design optimization. Constraints are formulated on the basis of kinematic performance and dynamic requirements, whereas the main objective is to minimize the total mass. Case studies are included to demonstrate the application of the optimization method in the design of assistive robots.

Computer Science::RoboticsBasis (linear algebra)Control and Systems EngineeringComputer scienceGeneral MathematicsRobot manipulatorDrivetrainKinematicsSoftwareSimulationComputer Science ApplicationsRobotics and Autonomous Systems
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Kernel manifold alignment for domain adaptation

2016

The wealth of sensory data coming from different modalities has opened numerous opportu- nities for data analysis. The data are of increasing volume, complexity and dimensionality, thus calling for new methodological innovations towards multimodal data processing. How- ever, multimodal architectures must rely on models able to adapt to changes in the data dis- tribution. Differences in the density functions can be due to changes in acquisition conditions (pose, illumination), sensors characteristics (number of channels, resolution) or different views (e.g. street level vs. aerial views of a same building). We call these different acquisition modes domains, and refer to the adaptation proble…

Computer and Information SciencesKernel FunctionsInformation Storage and RetrievalSocial Scienceslcsh:Medicine1100 General Agricultural and Biological SciencesResearch and Analysis MethodsInfographicsTopologyPattern Recognition AutomatedKernel MethodsCognitionLearning and MemoryMemory1300 General Biochemistry Genetics and Molecular BiologyImage Interpretation Computer-AssistedData MiningHumansPsychologyLife Science910 Geography & travelOperator TheoryManifoldslcsh:ScienceObject Recognition1000 MultidisciplinaryApplied MathematicsSimulation and ModelingData Visualizationlcsh:RCognitive PsychologyBiology and Life SciencesEigenvaluesFacial ExpressionAlgebra10122 Institute of GeographyLinear AlgebraData Interpretation StatisticalPhysical SciencesCognitive SciencePerceptionlcsh:QEigenvectorsGraphsAlgorithmsMathematicsResearch ArticleNeuroscience
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Topology of synaptic connectivity constrains neuronal stimulus representation, predicting two complementary coding strategies

2022

In motor-related brain regions, movement intention has been successfully decoded from in-vivo spike train by isolating a lower-dimension manifold that the high-dimensional spiking activity is constrained to. The mechanism enforcing this constraint remains unclear, although it has been hypothesized to be implemented by the connectivity of the sampled neurons. We test this idea and explore the interactions between local synaptic connectivity and its ability to encode information in a lower dimensional manifold through simulations of a detailed microcircuit model with realistic sources of noise. We confirm that even in isolation such a model can encode the identity of different stimuli in a lo…

Computer and Information SciencesPhysiologyScienceModels NeurologicalInformation TheoryAction PotentialsNeurophysiologySynaptic TransmissionMembrane PotentialTopologyAnimal CellsClustering CoefficientsAnimalsManifoldsNeuronsMultidisciplinaryNeuronal MorphologyQuantitative Biology::Neurons and CognitionDirected GraphsvariabilityQRBiology and Life SciencesEigenvaluesSomatosensory CortexCell BiologyRatsMicrocircuitsElectrophysiologyAlgebraLinear AlgebraCellular NeuroscienceGraph TheoryPhysical SciencesEngineering and TechnologyMedicineCellular TypesdiverseMathematicsElectrical EngineeringResearch ArticleNeuroscienceElectrical Circuits
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Cholesky decomposition techniques in electronic structure theory

2011

We review recently developed methods to efficiently utilize the Cholesky decomposition technique in electronic structure calculations. The review starts with a brief introduction to the basics of the Cholesky decomposition technique. Subsequently, examples of applications of the technique to ab inito procedures are presented. The technique is demonstrated to be a special type of a resolution-of-identity or density-fitting scheme. This is followed by explicit examples of the Cholesky techniques used in orbital localization, computation of the exchange contribution to the Fock matrix, in MP2, gradient calculations, and so-called method specific Cholesky decomposition. Subsequently, examples o…

Computer and Information SciencesTheoretical computer scienceBasis (linear algebra)Computer scienceCalibration (statistics)ComputationAb initioMathematicsofComputing_NUMERICALANALYSISData- och informationsvetenskapKemiType (model theory)Fock matrixChemical SciencesPruning (decision trees)AlgorithmCholesky decomposition
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Optimizing Kernel Ridge Regression for Remote Sensing Problems

2018

Kernel methods have been very successful in remote sensing problems because of their ability to deal with high dimensional non-linear data. However, they are computationally expensive to train when a large amount of samples are used. In this context, while the amount of available remote sensing data has constantly increased, the size of training sets in kernel methods is usually restricted to few thousand samples. In this work, we modified the kernel ridge regression (KRR) training procedure to deal with large scale datasets. In addition, the basis functions in the reproducing kernel Hilbert space are defined as parameters to be also optimized during the training process. This extends the n…

Computer science0211 other engineering and technologiesHyperspectral imagingContext (language use)Basis function02 engineering and technology01 natural sciencesData set010104 statistics & probabilityKernel (linear algebra)Kernel methodKernel (statistics)Radial basis function kernel0101 mathematics021101 geological & geomatics engineeringReproducing kernel Hilbert spaceRemote sensingIGARSS 2018 - 2018 IEEE International Geoscience and Remote Sensing Symposium
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Large-scale random features for kernel regression

2015

Kernel methods constitute a family of powerful machine learning algorithms, which have found wide use in remote sensing and geosciences. However, kernel methods are still not widely adopted because of the high computational cost when dealing with large scale problems, such as the inversion of radiative transfer models. This paper introduces the method of random kitchen sinks (RKS) for fast statistical retrieval of bio-geo-physical parameters. The RKS method allows to approximate a kernel matrix with a set of random bases sampled from the Fourier domain. We extend their use to other bases, such as wavelets, stumps, and Walsh expansions. We show that kernel regression is now possible for data…

Computer science1900 General Earth and Planetary Sciencescomputer.software_genreKernel (linear algebra)10122 Institute of GeographyKernel methodWavelet1706 Computer Science ApplicationsRadiative transferLife ScienceKernel regressionData mining910 Geography & travelcomputer2015 IEEE International Geoscience and Remote Sensing Symposium (IGARSS)
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MetNet: A two-level approach to reconstructing and comparing metabolic networks

2021

Metabolic pathway comparison and interaction between different species can detect important information for drug engineering and medical science. In the literature, proposals for reconstructing and comparing metabolic networks present two main problems: network reconstruction requires usually human intervention to integrate information from different sources and, in metabolic comparison, the size of the networks leads to a challenging computational problem. We propose to automatically reconstruct a metabolic network on the basis of KEGG database information. Our proposal relies on a two-level representation of the huge metabolic network: the first level is graph-based and depicts pathways a…

Computer scienceEnzyme MetabolismMetabolic networkcomputer.software_genreBiochemistryInfographics0302 clinical medicineCluster AnalysisEnzyme ChemistryData ManagementMammals0303 health sciencesMultidisciplinaryBasis (linear algebra)Settore INF/01 - InformaticaQRChemical ReactionsEukaryotaGraphChemistryVertebratesPhysical SciencesMedicineCarbohydrate MetabolismData miningMetabolic PathwaysComputational problemGraphsNetwork AnalysisMetabolic Networks and PathwaysResearch ArticleComputer and Information SciencesComputingMethodologies_SIMULATIONANDMODELINGScience03 medical and health sciencesMetabolic NetworksSimilarity (psychology)Xenobiotic MetabolismAnimalsHumansMetabolomicsKEGGRepresentation (mathematics)Symbiosis030304 developmental biologyData VisualizationOrganismsBiology and Life SciencesMetabolismMetabolic pathwayComputingMethodologies_PATTERNRECOGNITIONMetabolismAmniotesEnzymologycomputerZoology030217 neurology & neurosurgerySoftwarePLoS ONE
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