Search results for "Loi"

showing 10 items of 4617 documents

Prospects and challenges for computer simulations of monolayer-protected metal clusters

2021

Precise knowledge of chemical composition and atomic structure of functional nanosized systems, such as metal clusters stabilized by an organic molecular layer, allows for detailed computational work to investigate structure-property relations. Here, we discuss selected recent examples of computational work that has advanced understanding of how these clusters work in catalysis, how they interact with biological systems, and how they can make self-assembled, macroscopic materials. A growing challenge is to develop effective new simulation methods that take into account the cluster-environment interactions. These new hybrid methods are likely to contain components from electronic structure t…

0301 basic medicineWork (thermodynamics)Computational chemistryComputer scienceScienceGeneral Physics and AstronomyNanotechnology02 engineering and technologyElectronic structureGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesklusteritMonolayerlaskennallinen tiedesimulointiLayer (object-oriented design)MultidisciplinaryQCommentGeneral Chemistry021001 nanoscience & nanotechnology030104 developmental biologyNanoparticlesnanohiukkaset0210 nano-technologySimulation methodsMetal clustersNature Communications
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Microbiome-assisted carrion preservation aids larval development in a burying beetle

2018

Significance Ephemeral diets such as carrion are high-quality resources that are susceptible to microbial spoilage. Carrion-feeding insects that breed on decaying carcasses must overcome challenges arising from competing microbes. Here we report that a carrion-feeding burying beetle preserves carcasses by regulating its microbial growth, resulting in changes in its biochemical properties including the reduction of toxic polyamines associated with putrefaction and nutrient loss. The beetle’s microbial symbionts form a biofilm-like matrix on carcasses, which is important for optimal larval development. The beetles and their microbiome thus coordinate a specialized adaptive strategy of carrion…

0301 basic medicineZoologyDecomposer03 medical and health scienceschemistry.chemical_compoundCadaverinePutrescineinsect nutritionAnimalsCarrionMicrobiomeresource competitionLarvaCadaverineMultidisciplinaryEcologygut microbiotaBacteriabiologyMicrobiotafungusfungiFungifood and beveragesBiological Sciencesbiology.organism_classificationNicrophorus vespilloidessymbiosisColeoptera030104 developmental biologyMicrobial population biologychemistryBiofilmsLarvaBurying beetleTranscriptome
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Physiological Functions of the β-Site Amyloid Precursor Protein Cleaving Enzyme 1 and 2

2017

BACE1 was discovered as the β-secretase for initiating the cleavage of amyloid precursor protein (APP) at the β-secretase site, while its close homology BACE2 cleaves APP within the β-amyloid (Aβ) domain region and shows distinct cleavage preferences in vivo. Inhibition of BACE1 proteolytic activity has been confirmed to decrease Aβ generation and amyloid deposition, and thus specific inhibition of BACE1 by small molecules is a current focus for Alzheimer’s disease therapy. While BACE1 inhibitors are being tested in advanced clinical trials, knowledge regarding the properties and physiological functions of BACE is highly important and this review summarizes advancements in BACE1 research ov…

0301 basic medicineamyloid plaquessecretaseReviewamyloid precursor proteinBiology03 medical and health sciencesCellular and Molecular Neurosciencemental disordersAmyloid precursor proteinaspartic proteaseBACE substratesGlucose homeostasisMolecular Biologychemistry.chemical_classificationNeurogenesisBACE2P3 peptideBACE1Biochemistry of Alzheimer's disease030104 developmental biologyEnzymechemistryBiochemistrySynaptic plasticitybiology.proteinAmyloid precursor protein secretaseAlzheimer’s diseaseNeuroscienceFrontiers in Molecular Neuroscience
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Burying beetles regulate the microbiome of carcasses and use it to transmit a core microbiota to their offspring

2017

Necrophagous beetles utilize carrion, a highly nutritious resource that is susceptible to intense microbial competition, by treating it with antimicrobial anal and oral secretions. However, how this regulates the carcass microbiota remains unclear. Here, we show that carcasses prepared by the burying beetle Nicrophorus vespilloides undergo significant changes in their microbial communities subsequent to their burial and ‘preparation’. Prepared carcasses hosted a microbial community that was more similar to that of beetles’ anal and oral secretions than to the native carcass community or the surrounding soil, indicating that the beetles regulated the carcass microbiota. A core microbial comm…

0301 basic medicineanimal diseasesmedia_common.quotation_subjectEnterococcaceaeCompetition (biology)03 medical and health sciencesfluids and secretionsEnterococcaceaeGeneticsAnimalsCarrionMicrobiomeSymbiosisEcology Evolution Behavior and Systematicsmedia_commonbiologyEcologyMicrobiotadigestive oral and skin physiologyXanthomonadaceaetechnology industry and agriculturefood and beveragesbiology.organism_classificationNicrophorus vespilloidesColeoptera030104 developmental biologyMicrobial population biologyLarvaBurying beetleDigestive SystemMolecular Ecology
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Temporal frames of 45S rDNA site-number variation in diploid plant lineages: lessons from the rock rose genus Cistus (Cistaceae)

2016

The perception that the turnover of 45S rDNA site number in plants is highly dynamic pervades the literature on rDNA evolution. However, most reported evidences come from the study of polyploid systems and from crop species subjected to intense agronomic selection. In sharp contrast with polyploids, the evolutionary patterns of rDNA loci number in predominantly diploid lineages have received less attention. Most studies on rDNA loci changes lack explicit temporal frames, and hence their dynamics could not be assessed. Here, we assess the temporal patterns of rDNA site evolution in Cistus, an entirely diploid lineage. We assessed the number and chromosomal position of 45S rDNA loci in Cistus…

0301 basic medicinebiologyCistusTuberariaCistaceaeCistaceaebiology.organism_classification45S rDNATuberaria03 medical and health sciencesFumana030104 developmental biologyGenusPhylogeneticsCistusBotanyfluorescent in situ hybridizationFumanaPloidydiploid lineageRibosomal DNAEcology Evolution Behavior and Systematics
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Description of embryonic development and ultrastructure in miracidia ofCardiocephaloides longicollis(Digenea, Strigeidae) in relation to active host …

2017

The functional ultrastructure and embryonic development of miracidia in naturally released eggs of the trematode Cardiocephaloides longicollis were studied using light and transmission electron microscopy. This species has operculated eggs and embryogenesis occurs in the marine environment before an actively infecting ciliated miracidium hatches. Six different developmental stages were identified. The lack of pores in the eggshell indicates its impermeability and the miracidium's dependency on glycogen nutritive reserves, contained in numerous vitellocytes in early embryos. As the development advances, these merge into larger vitelline vacuoles that encircle the miracidium and may aid its h…

0301 basic medicinebiologyEmbryogenesisEmbryoAnatomy030108 mycology & parasitologybiology.organism_classificationDigeneaCell biology03 medical and health sciencesUltrastructureParasite hostingAnimal Science and ZoologyTrematodaEggshellCardiocephaloides longicollisDevelopmental BiologyJournal of Morphology
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The search for novel targets in Alzheimer's disease—The 90s redux

2021

Alzheimer's disease (AD) is a complex disease of the brain. Despite over 100 years of basic and clinical research, significantly intensified in the last three decades, the exact cause of this neurodegeneration is still an enigma. Based on neuroanatomical, experimental, and clinical findings, a series of hypotheses on AD pathogenesis have evolved. Among them, the "amyloid cascade hypothesis" has been most prominent. Clinical efforts targeting the biochemistry of amyloid β-protein (Aβ) as causal therapy have all failed so far, which may mean that the pathogenic mechanism of AD is less straightforward than initially thought. While there was good scientific reason to support this hypothesis bef…

0301 basic medicinebusiness.industryMechanism (biology)NeurodegenerationComplex diseaseDiseasemedicine.disease03 medical and health sciences030104 developmental biology0302 clinical medicineMedicineDECIPHERAmyloid cascadebusinessNeuroscience030217 neurology & neurosurgery
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Loss of MCL1 function sensitizes the MDA-MB-231 breast cancer cells to rh-TRAIL by increasing DR4 levels.

2019

Triple-negative breast cancer (TNBC) is a form of BC characterized by high aggressiveness and therapy resistance probably determined by cancer stem cells. MCL1 is an antiapoptotic Bcl-2 family member that could limit the efficacy of anticancer agents as recombinant human tumor necrosis factor related apoptosis-inducing ligand (rh-TRAIL). Here, we investigated MCL1 expression in TNBC tissues and cells. We found MCL1 differentially expressed (upregulated or downregulated) in TNBC tissues. Furthermore, in comparison to the human mammary epithelial cells, we found that MDA-MB-231 cells show similar messenger RNA levels but higher MCL1 protein levels, whereas it resulted downregulated in MDA-MB-…

0301 basic medicinecancer stem cellIndolesPhysiologyCell SurvivalClinical BiochemistryCellPopulationApoptosisTNF-Related Apoptosis-Inducing Ligand03 medical and health sciences0302 clinical medicineCancer stem cellSettore BIO/10 - BiochimicaCell Line Tumormedicinerh-TRAILBiomarkers TumorGene silencingHumansViability assayGene SilencingeducationCell ShapeCell ProliferationMembrane Potential Mitochondrialeducation.field_of_studySulfonamidesChemistryCell growthCell CycleCell BiologyCell cycleRecombinant ProteinsGene Expression Regulation NeoplasticReceptors TNF-Related Apoptosis-Inducing Ligand030104 developmental biologymedicine.anatomical_structureMCL1ApoptosisDR4 receptor030220 oncology & carcinogenesisCancer researchtriple-negative breast cancerMyeloid Cell Leukemia Sequence 1 ProteinJournal of cellular physiology
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Target Transportation of Auxin on Mesoporous Au/SiO2 Nanoparticles as a Method for Somaclonal Variation Increasing in Flax (L. usitatissimum L.)

2017

Development of methods for direct delivery of different bioactive substances into the cell is a promising and intensively approached area of research. It has become a subject of serious research for multidisciplinary team of scientists working in such areas as physics, biology, and biotechnology. Plant calluses were grown on medium supplemented with different nanoparticles to be used as a model for biotechnological research. Gold nanoparticles with mesoporous silica coating were used as hormone carriers, since they possess many of critical properties required for cellular transportation instrument. Some of those properties are great biocompatibility and controlled release of carried molecul…

0301 basic medicinechemistry.chemical_classificationMaterials scienceBiocompatibilitybiologyArticle SubjectNanoparticleNanotechnology02 engineering and technologyMesoporous silica021001 nanoscience & nanotechnologybiology.organism_classificationControlled releaseSomaclonal variation03 medical and health sciences030104 developmental biologychemistryAuxinColloidal goldlcsh:Technology (General):NATURAL SCIENCES:Physics [Research Subject Categories]lcsh:T1-995General Materials SciencePlant hormone0210 nano-technologyJournal of Nanomaterials
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Are There Knots in Chromosomes?

2017

Recent developments have for the first time allowed the determination of three-dimensional structures of individual chromosomes and genomes in nuclei of single haploid mouse embryonic stem (ES) cells based on Hi⁻C chromosome conformation contact data. Although these first structures have a relatively low resolution, they provide the first experimental data that can be used to study chromosome and intact genome folding. Here we further analyze these structures and provide the first evidence that G1 phase chromosomes are knotted, consistent with the fact that plots of contact probability vs sequence separation show a power law dependence that is intermediate between that of a fractal globule …

0301 basic medicinechromosomesPolymers and PlasticsknotsPower lawGenomeArticlelcsh:QD241-44103 medical and health scienceschemistry.chemical_compound0302 clinical medicineFractallcsh:Organic chemistrySequence (medicine)PhysicsChromosomeGeneral ChemistryDNAchromosome territoriesFolding (chemistry)030104 developmental biologychemistryEvolutionary biologyfractal globuleknots; chromosomes; chromosome territories; DNA; fractal globulePloidy030217 neurology & neurosurgeryDNAPolymers
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