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showing 10 items of 12024 documents

Transcriptional responses to pre-flowering leaf defoliation in grapevine berry from different growing sites, years, and genotypes

2017

Leaf removal is a grapevine canopy management technique widely used to modify the source–sink balance and/or microclimate around berry clusters to optimize fruit composition. In general, the removal of basal leaves before flowering reduces fruit set, hence achieving looser clusters, and improves grape composition since yield is generally curtailed more than proportionally to leaf area itself. Albeit responses to this practice seem quite consistent, overall vine performance is affected by genotype, environmental conditions, and severity of treatment. The physiological responses of grape varieties to defoliation practices have been widely investigated, and just recently a whole genome trans…

0106 biological sciences0301 basic medicineCanopyBerry transcriptome; Flavonoid; Grapevine; Pre-flowering defoliation; Secondary metabolite; Plant ScienceBerry transcriptomeBerryPlant Sciencelcsh:Plant cultureBiology01 natural sciencesTranscriptomeCropSecondary metabolite03 medical and health scienceschemistry.chemical_compoundAuxinSettore AGR/07 - Genetica AgrariaBotanylcsh:SB1-1110JasmonateAbscisic acidOriginal Research2. Zero hungerchemistry.chemical_classificationfungifood and beveragesRipening15. Life on landPre-flowering defoliationberry transcriptome; flavonoid; grapevine; pre-flowering defoliation; secondary metaboliteSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologychemistryFlavonoidGrapevine010606 plant biology & botany
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Hormonal and carbohydrate control of fruit set in avocado ‘Lamb Hass’. A question of the type of inflorescence?

2021

[EN] The avocado tree (Persea americana Mill.) has two types of shoots, indeterminate, which maintain vegetative development from an apical bud, and determinate, which do not have vegetative growth. Indeterminate shoots set fewer fruits than determinate ones, and significantly hasten physiological fruitlet abscission. The competition between vegetative and flower development is accepted as the most reasonable hypothesis to explain the differences. However, our results show that from anthesis until fruit set flowers of indeterminate inflorescences, both those remaining on the tree and those abscised, had a higher sucrose and C6 carbohydrate content than flowers of determinate ones and no dif…

0106 biological sciences0301 basic medicineCarbohydratePerseaCytokininsVegetative reproductionApical dominanceCytokininCarbohydratesHorticulture01 natural sciences03 medical and health sciencesAbscissionAnthesisPRODUCCION VEGETALAuxinFruitingGibberellinbiologyfood and beveragesFlowering shootsbiology.organism_classificationGibberellinsHorticulture030104 developmental biologyInflorescenceFlowering shootPersea americanaShootGibberellin010606 plant biology & botanyScientia Horticulturae
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An SNP-based saturated genetic map and QTL analysis of fruit-related traits in Zucchini using Genotyping-by-sequencing

2016

[EN] Background: Cucurbita pepo is a cucurbit with growing economic importance worldwide. Zucchini morphotype is the most important within this highly variable species. Recently, transcriptome and Simple Sequence Repeat (SSR)- and Single Nucleotide Polymorphism (SNP)-based medium density maps have been reported, however further genomic tools are needed for efficient molecular breeding in the species. Our objective is to combine currently available complete transcriptomes and the Zucchini genome sequence with high throughput genotyping methods, mapping population development and extensive phenotyping to facilitate the advance of genomic research in this species. Results: We report the Genoty…

0106 biological sciences0301 basic medicineCartographyCandidate geneGenotyping TechniquesPopulationQuantitative Trait LociGenomicsSingle-nucleotide polymorphismFlowersBiologyQuantitative trait locusGBS01 natural sciencesPolymorphism Single NucleotideCandidate genes03 medical and health sciencesCucurbitaGeneticsGens MapatgeeducationGenotyping TechniquesGeneticsMolecular breedingWhole genome sequencingeducation.field_of_studyPigmentationChromosome MappingRILfood and beveragesGenomicsCucurbita pepoGENETICAGenòmica030104 developmental biologyPhenotypePhenotypingFruitSequence Analysis010606 plant biology & botanyBiotechnologyResearch Article
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Gibberellin reactivates and maintains ovary-wall cell division causing fruit set in parthenocarpic Citrus species

2016

[EN] Citrus is a wide genus in which most of the cultivated species and cultivars are natural parthenocarpic mutants or hybrids (i.e. orange, mandarin, tangerine, grapefruit). The autonomous increase in GA(1) ovary concentration during anthesis was suggested as being the stimulus responsible for parthenocarpy in Citrus regardless of the species. To determine the exact GA-role in parthenocarpic fruit set, the following hypothesis was tested: GA triggers and maintains cell division in ovary walls causing fruit set. Obligate and facultative parthenocarpic Citrus species were used as a model system because obligate parthenocarpic Citrus sp (i.e. Citrus unshiu) have higher GA levels and better n…

0106 biological sciences0301 basic medicineCitrusCell divisionFruit setCitruFlowersPlant ScienceOrange (colour)BiologyParthenocarpy01 natural sciencesPaclobutrazol03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsGeneticAnthesisCell WallGene Expression Regulation PlantBotanyPRODUCCION VEGETALGeneticsGibberellinPhylogenyFruit treePlant Growth Regulatorfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationGibberellinsUp-RegulationCitrus unshiu030104 developmental biologychemistryFlowerFruitMicroscopy Electron ScanningParthenocarpyGibberellinAgronomy and Crop ScienceCell DivisionFruit tree010606 plant biology & botanyPlant Science
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Northern European Salmo trutta (L.) populations are genetically divergent across geographical regions and environmental gradients

2020

The salmonid fish Brown trout is iconic as a model for the application of conservation genetics to understand and manage local interspecific variation. However, there is still scant information about relationships between local and large-scale population structure, and to what extent geographical and environmental variables are associated with barriers to gene flow. We used information from 3,782 mapped SNPs developed for the present study and conducted outlier tests and gene–environment association (GEA) analyses in order to examine drivers of population structure. Analyses comprised >2,600 fish from 72 riverine populations spanning a central part of the species' distribution in norther…

0106 biological sciences0301 basic medicineConservation geneticsSELECTIONPopulationsalmonidCONSERVATIONlcsh:Evolutiongenotype‐environment association010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesbrown troutLOCAL ADAPTATIONSampling designlcsh:QH359-425GeneticsGENOME SCANS14. Life underwaterSalmoeducationEcology Evolution Behavior and SystematicsLocal adaptationGenotype‐environment associationeducation.field_of_studyCLIMATE-CHANGEbiologyBROWN TROUTSTRUCTURED POPULATIONSR-PACKAGESampling (statistics)genotype-environment associationVDP::Matematikk og Naturvitenskap: 400biology.organism_classification030104 developmental biologyEvolutionary biologyoutlier testTEMPORAL-CHANGESOutlierGeneral Agricultural and Biological SciencesASCERTAINMENT BIASlocal adaptation
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Very high MHC Class IIB diversity without spatial differentiation in the mediterranean population of greater Flamingos.

2017

WOS: 000397335400001

0106 biological sciences0301 basic medicineGene FlowGenotypeLocal adaptationPopulationGenes MHC Class II010603 evolutionary biology01 natural sciencesIntraspecific competitionGene flowMHC GenesBirds03 medical and health sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimals[ SDV.IMM ] Life Sciences [q-bio]/Immunology14. Life underwaterSelection GeneticeducationEcology Evolution Behavior and SystematicsAllelic diversity ; Local adaptation ; MHC genes ; Pathogen-mediated balancing selection ; Greater flamingosAllelesLocal adaptationeducation.field_of_studyGenetic diversitybiologyHistocompatibility Antigens Class IIGenetic VariationAllelic diversityMHC genesExonsbiology.organism_classificationPathogen-mediated balancing selection030104 developmental biologyEvolutionary biologyGreater flamingosBiological dispersal[SDV.IMM]Life Sciences [q-bio]/ImmunologyGreater flamingoAdaptation[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisResearch Article
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Demographic history has shaped the strongly differentiated corkwing wrasse populations in Northern Europe

2019

Understanding the biological processes involved in genetic differentiation and divergence between populations within species is a pivotal aim in evolutionary biology. One particular phenomenon that requires clarification is the maintenance of genetic barriers despite the high potential for gene flow in the marine environment. Such patterns have been attributed to limited dispersal or local adaptation, and to a lesser extent to the demographic history of the species. The corkwing wrasse (Symphodus melops) is an example of a marine fish species where regions of particular strong divergence are observed. One such genetic break occurred at a surprisingly small spatial scale (FST ~0.1), over a s…

0106 biological sciences0301 basic medicineGene FlowMaleReproductive IsolationDemographic historyphylogeography010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesGenetic driftGeneticsAnimals14. Life underwaterEcology Evolution Behavior and Systematicspopulation genetics—empiricalLocal adaptationDemographyfishGenomebiologyEcologyGenetic DriftFisheslandscape geneticsVDP::Matematikk og Naturvitenskap: 400Reproductive isolationVDP::Mathematics and natural science: 400::Zoology and botany: 480::Zoogeography: 486VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Zoogeografi: 486biology.organism_classificationEuropePhylogeography030104 developmental biologyaquacultureEvolutionary biologyBiological dispersalFemaleCorkwing wrasse
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The nucleotide sequence of a recombinant tomato yellow leaf curl virus strain frequently detected in Sicily isolated from tomato plants carrying the …

2017

In July 2016, an aggressive syndrome of tomato yellow leaf curl disease was reported in Sicily in tomato plants carrying the Ty-1 resistance gene. A total of 34 samples were collected and analyzed. Twenty-seven out of the 34 samples analyzed appeared to contain only recombinant molecules. One full sequence was obtained after cloning. Alignments and plot similarity analysis showed that the genome of the recombinant, named TYLCV-IL[IT:Sic23:16], was mostly derived from tomato yellow leaf curl virus (TYLCV), with a small region of 132 nucleotides in the non-coding region between the stem-loop and the start of the V2 ORF replaced by 124 nucleotides derived from a virus of a different species, t…

0106 biological sciences0301 basic medicineGenes ViralSequence analysisvirusesBiology01 natural sciencesViruslaw.invention03 medical and health sciencesSolanum lycopersicumlawVirologyPlant ImmunityCultivarTomato yellow leaf curl virusGeneSicilyDisease ResistancePlant DiseasesRecombination GeneticBase SequencefungiNucleic acid sequencefood and beveragesHigh-Throughput Nucleotide SequencingSettore AGR/12 - Patologia VegetaleGeneral MedicineSequence Analysis DNAbiology.organism_classificationPlants Genetically ModifiedVirologyPlant LeavesHorticulture030104 developmental biologyBegomovirusRecombinant DNALeaf curlDisease Susceptibility010606 plant biology & botanyGeminivirus molecular evolution recombination
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Ongoing Evolution in the Genus Crocus: Diversity of Flowering Strategies on the Way to Hysteranthy

2021

[EN] Species of the genus Crocus are found over a wide range of climatic areas. In natural habitats, these geophytes diverge in the flowering strategies. This variability was assessed by analyzing the flowering traits of the Spanish collection of wild crocuses, preserved in the Bank of Plant Germplasm of Cuenca. Plants of the seven Spanish species were analyzed both in their natural environments (58 native populations) and in common garden experiments (112 accessions). Differences among species observed in the native habitats were maintained under uniform environmental conditions, suggesting a genetic basis for flowering mechanisms. Two eco-morphological types, autumn- and spring-flowering …

0106 biological sciences0301 basic medicineGermplasmFlowering timeRange (biology)SynanthousBiodiversityPlant Science15.- Proteger restaurar y promover la utilización sostenible de los ecosistemas terrestres gestionar de manera sostenible los bosques combatir la desertificación y detener y revertir la degradación de la tierra y frenar la pérdida de diversidad biológica01 natural sciencesArticle03 medical and health sciencesGenuslcsh:BotanyBotanyHysteranthousPrimordiumGenetic variabilityEcology Evolution Behavior and SystematicsCrocusEcologybiologyfungifood and beveragesBiodiversitybiology.organism_classificationBiodiversitatlcsh:QK1-989Settore AGR/07 - GENETICA AGRARIAFlower development030104 developmental biologyHabitatFloraFISIOLOGIA VEGETALGenetic variability010606 plant biology & botanyPlants
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Characterization of Sicilian rosemary (Rosmarinus officinalis L.) germplasm through a multidisciplinary approach.

2020

In Sicily, small differences exist between wild and cultivated rosemary biotypes; VOCs and genetic profiles may be a useful tool to distinguish them. A germplasm collection of Rosmarinus officinalis L. was harvested from 15 locations in Sicily. Eleven wild and four cultivated populations were collected and, due to the surveyed area covered, they can be considered as a representative panel of Sicilian genetic background of the species. Ex situ plant collection was transferred to the field cultivation in homogeneous conditions for characterizing through a multidisciplinary approach. The study included morphological traits observations (growth habitus, flower color, number and size of leaves, …

0106 biological sciences0301 basic medicineGermplasmPopulationBiodiversityPlant Science01 natural sciencesGenetic diversityRosmarinusWild populationsRosemary; SSR; biodiversity03 medical and health sciencesBotanyGeneticseducationGenome sizeGenetic diversityeducation.field_of_studyAnalysis of VariancebiologyVolatile organic compoundbiology.organism_classificationFlow CytometryRosmarinusPlant Leaves030104 developmental biologyOfficinalisMedicinal and aromatic plantMicrosatelliteSimple sequence repeat010606 plant biology & botanyMicrosatellite RepeatsPlanta
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