Search results for "Lyases"

showing 10 items of 85 documents

Effects of transgenic expression of Brevibacterium linens methionine gamma lyase (MGL) on accumulation of Tylenchulus semipenetrans and key aminoacid…

2017

Key message Carrizo transgenic plants overexpressing methionine-gamma-lyase produced dimethyl sulfide. The transgenic plants displayed more resistance to nematode attacks (Tylenculus semipenetrans) and may represent an innovative strategy for nematode control. Abstract Tylenchulus semipenetrans is a nematode pest of many citrus varieties that causes extensive damage to commercial crops worldwide. Carrizo citrange vr. (Citrus sinensis L. Usb × Poncirus trifoliate L. Raf) plants overexpressing Brevibacterium linens methionine-gamma-lyase (BlMGL) produced the sulfur volatile compound dimethyl sulfide (DMS). The aim of this work was to determine if transgenic citrus plants expressing BlMGL show…

0106 biological sciences0301 basic medicineNematodesPlant BiologyPlant ScienceGenetically modified crops01 natural sciencesPlant Rootschemistry.chemical_compoundMethionineMethionine gamma lyaseBrevibacteriumAmino AcidsNematodeCitrus sinensibiologySulfur volatilefood and beveragesGeneral MedicinePlantsPlants Genetically ModifiedTylenchulus semipenetransAmino AcidHorticultureCarbon-Sulfur LyasesBiochemistryCarbon-Sulfur LyasePlant LeaveCitrus × sinensisCitrus sinensisTylenchidaMethionine gamma-lyaseSulfideTransgenePlant Biology & BotanyPlant DiseaseGenetically ModifiedSulfidesArticle03 medical and health sciencesGeneticSulfur volatilesGeneticsAnimalsPlant DiseasesMethionineAnimalfungiPlant RootBrevibacteriumbiology.organism_classificationBrain DisordersPlant Leaves030104 developmental biologychemistryGlycineBiochemistry and Cell BiologyAgronomy and Crop Science010606 plant biology & botany
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C 4 -Dicarboxylate Utilization in Aerobic and Anaerobic Growth

2016

C 4 -dicarboxylates and the C 4 -dicarboxylic amino acid l -aspartate support aerobic and anaerobic growth of Escherichia coli and related bacteria. In aerobic growth, succinate, fumarate, D - and L -malate, L -aspartate, and L -tartrate are metabolized by the citric acid cycle and associated reactions. Because of the interruption of the citric acid cycle under anaerobic conditions, anaerobic metabolism of C 4 -dicarboxylates depends on fumarate reduction to succinate (fumarate respiration). In some related bacteria (e.g., Klebsiella ), utilization of C 4 -dicarboxylates, such as tartrate, is independent of fumarate respiration and uses a Na + -dependent membrane-bound oxaloacetate decarbo…

0301 basic medicineCarboxy-LyasesCitric Acid Cycle030106 microbiologySuccinic AcidContext (language use)medicine.disease_causeMicrobiology03 medical and health sciencesFumaratesKlebsiellaEscherichia colimedicineHumansDicarboxylic AcidsAnaerobiosisEscherichia coliDicarboxylic Acid TransportersbiologyEscherichia coli ProteinsMembrane Transport ProteinsBiological TransportGene Expression Regulation BacterialMetabolismFumarate reductasebiology.organism_classificationAerobiosisCitric acid cycle030104 developmental biologyOxaloacetate decarboxylaseBiochemistryAnaerobic exerciseBacteriaEcoSal Plus
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Mimiviruses and the Human Interferon System: Viral Evasion of Classical Antiviral Activities, But Inhibition By a Novel Interferon-β Regulated Immuno…

2017

International audience; In this review we discuss the role of mimiviruses as potential human pathogens focusing on clinical and evolutionary evidence. We also propose a novel antiviral immunomodulatory pathway controlled by interferon-beta (IFN-beta) and mediated by immune-responsive gene 1 (IRG1) and itaconic acid, its product. Acanthamoeba polyphaga Mimivirus (APMV) was isolated from amoebae in a hospital while investigating a pneumonia outbreak. Mimivirus ubiquity and role as protist pathogens are well understood, and its putative status as a human pathogen has been gaining strength as more evidence is being found. The study of APMV and human cells interaction revealed that the virus is …

0301 basic medicineCarboxy-LyasesImmunologyHuman pathogenVirusImmunomodulation03 medical and health sciences[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseasesInterferon βInterferonVirologymedicineAnimalsHumansGiant VirusGenetic Predisposition to DiseaseGeneMimivirusbiologyProteinsSuccinatesCell BiologyInterferon-betabiology.organism_classificationVirologyDNA Virus Infections3. Good health030104 developmental biologyAcanthamoeba polyphagaHost-Pathogen InteractionsInterferonsMimiviridaemedicine.drugSignal TransductionJournal of interferoncytokine research : the official journal of the International Society for Interferon and Cytokine Research
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Brain histamine and behavioral neuroscience

2017

ABSTRACT NON PREVISTO DALLA PUBBLICAZIONE

0301 basic medicineCarboxy-LyasesVideo RecordingEditorial: NeuroscienceBehavioral neuroscienceSettore BIO/09 - Fisiologiabehavioral sequenceHistonesMice03 medical and health scienceschemistry.chemical_compound0302 clinical medicineAnimalsHumansMedicineMotor NeuronsBehaviorBehavior Animalbusiness.industryNeurosciencesBrainhistaminePhenotype030104 developmental biologyOncologychemistryAnesthesiaBehavior; Behavioral sequence; Histamine; Neuroscience; T-pattern; OncologyT-patternbusinessNeuroscience030217 neurology & neurosurgeryHistamineTourette SyndromeNeuroscienceOncotarget
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Encapsulation mechanisms and structural studies of GRM2 bacterial microcompartment particles

2019

Bacterial microcompartments (BMCs) are prokaryotic organelles consisting of a protein shell and an encapsulated enzymatic core. BMCs are involved in several biochemical processes, such as choline, glycerol and ethanolamine degradation and carbon fixation. Since non-native enzymes can also be encapsulated in BMCs, an improved understanding of BMC shell assembly and encapsulation processes could be useful for synthetic biology applications. Here we report the isolation and recombinant expression of BMC structural genes from the Klebsiella pneumoniae GRM2 locus, the investigation of mechanisms behind encapsulation of the core enzymes, and the characterization of shell particles by cryo-EM. We …

0301 basic medicineKlebsiella pneumoniaeScience030106 microbiologyGeneral Physics and AstronomyLyasesGeneral Biochemistry Genetics and Molecular BiologyArticleCholine03 medical and health sciencesSynthetic biologyBacterial ProteinsBacterial microcompartmentCryoelectron microscopyOrganellelcsh:ScienceCellular microbiologychemistry.chemical_classificationOrganellesBacterial structural biologyMultidisciplinarybiologyChemistryStructural geneQSignal transducing adaptor proteinGeneral ChemistryLyasebiology.organism_classificationRecombinant ProteinsKlebsiella pneumoniae030104 developmental biologyEnzymeGenetic LociBiophysicslcsh:QSynthetic BiologyNature Communications
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Insights into the inhibited form of the redox-sensitive SufE-like sulfur acceptor CsdE

2017

17 p.-8 fig.

0301 basic medicineProtein ConformationDimerlcsh:MedicineMolecular DynamicsCrystallography X-RayPhysical ChemistryBiochemistryDEAD-box RNA HelicasesMolecular dynamicschemistry.chemical_compoundComputational ChemistryNucleophileBiochemical Simulationslcsh:ScienceMultidisciplinaryCrystallographyChemistryOrganic CompoundsPhysicsEscherichia coli ProteinsCondensed Matter Physics3. Good healthPhysical sciencesChemistryCarbon-Sulfur LyasesBiochemistryCrystal StructureResearch ArticleChemical ElementsProtein subunitChemical physicschemistry.chemical_elementOxidative phosphorylationMolecular Dynamics Simulation03 medical and health sciencesThiolsEscherichia coliSolid State PhysicsProtein Interaction Domains and MotifsChemical BondingOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesComputational BiologyDimers (Chemical physics)Hydrogen BondingCell BiologySulfurAcceptorRedox sensitiveOxidative Stress030104 developmental biologyBiophysicslcsh:QProtein MultimerizationSulfur
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High Nutrient Concentration Can Induce Virulence Factor Expression and Cause Higher Virulence in an Environmentally Transmitted Pathogen

2016

Environmentally transmitted opportunistic pathogens shuttle between two substantially different environments: outside-host and within-host habitats. These environments differ from each other especially with respect to nutrient availability. Consequently, the pathogens are required to regulate their behavior in response to environmental cues in order to survive, but how nutrients control the virulence in opportunistic pathogens is still poorly understood. In this study, we examined how nutrient level in the outside-host environment affects the gene expression of putative virulence factors of the opportunistic fish pathogen Flavobacterium columnare. The impact of environmental nutrient concen…

0301 basic medicineVirulence Factors030106 microbiologyvirulence factorsSoil ScienceVirulenceBiologyReal-Time Polymerase Chain ReactionFlavobacteriumVirulence factorflavobacterium columnareMicrobiologyFish Diseases03 medical and health sciencesMicrobial ecologynutrientscolony typeAnimalsCollagenasesPathogenGeneEcology Evolution Behavior and SystematicsChondroitin LyasesEcologyHost (biology)RT-qPCREnvironmental Exposurechondroitinasebiology.organism_classificationcollagenase030104 developmental biologyFoodOncorhynchus mykissFlavobacterium columnareWater MicrobiologyBacteriaMicrobial Ecology
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1-Aminocyclopropane-1-Carboxylic Acid, its Malonyl Conjugate and 1-Aminocyclopropane-1-Carboxylate Synthase Activity in Needles of Damaged and Undama…

1994

Summary Levels of free 1-aminocyclopropane-1-carboxylic acid (ACC), its malonyl conjugate (MACC) and ACC-synthase activity were significantly higher in the needles of damaged Norway spruce trees ( Picea abies (L.) Karst ) compared with those in undamaged trees during both the diurnal and seasonal courses. The concentrations of ACC and MACC, and ACC-synthase activity fluctuated much more intensively in the needles of damaged trees both in the diurnal and the seasonal courses than in those of undamaged ones, which implies that damaged trees respond more sensitively to the environmental conditions. ACC concentrations were the highest in summer and lowest in fall, while MACC concentrations seem…

ACC SYNTHASEDevelopmental stagebiologyPhysiologyChemistryBaden wurttembergPicea abiesPlant Sciencebiology.organism_classificationbehavioral disciplines and activitiesstomatognathic diseaseschemistry.chemical_compoundnervous systemBotanybiology.protein1-Aminocyclopropane-1-carboxylic acidCarbon-Sulfur Lyases1-aminocyclopropane-1-carboxylate synthasehuman activitiesAgronomy and Crop Sciencepsychological phenomena and processesConjugateJournal of Plant Physiology
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Genetic organization of the citCDEF locus and identification of mae and clyR genes from Leuconostoc mesenteroides.

1999

ABSTRACT In this paper, we describe two open reading frames coding for a NAD-dependent malic enzyme ( mae ) and a putative regulatory protein ( clyR ) found in the upstream region of citCDEFG of Leuconostoc mesenteroides subsp. cremoris 195. The transcriptional analysis of the citrate lyase locus revealed one polycistronic mRNA covering the mae and citCDEF genes. This transcript was detected only on RNA prepared from cells grown in the presence of citrate. Primer extension experiments suggest that clyR and the citrate lyase operon are expressed from a bidirectional A-T-rich promoter region located between mae and clyR.

ATP citrate lyaseTranscription GeneticOperonMolecular Sequence DataMalatesLocus (genetics)Genetics and Molecular BiologyBiologyMicrobiologyPrimer extensionCitric AcidOpen Reading FramesBacterial ProteinsMalate DehydrogenaseMultienzyme ComplexesLeuconostocAmino Acid SequenceMolecular BiologyGeneGeneticsBase SequenceOxo-Acid-LyasesPromoterGene Expression Regulation BacterialSequence Analysis DNAbiology.organism_classificationMolecular biologyLeuconostoc mesenteroidesGenes BacterialSequence AlignmentLeuconostocJournal of bacteriology
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Expression of the pea S -adenosylmethionine decarboxylase gene is involved in developmental and environmental responses

2002

A cDNA, able to complement the S-adenosyl-L-methionine decarboxylase (SAMdC; EC 4.1.1.50)-defective yeast strain Y342, has been isolated from pea (Pisum sativum L.). Expression of the SAMdC gene was characterised during pea development. Northern analysis showed a differential expression of the pea SAMdC gene in vegetative and reproductive tissues. The highest SAMdC mRNA levels were found in undifferentiated callus and tissues with high rates of cell division, and at the onset of fruit development. SAMdC expression was also induced in senescing ovaries, probably in relation to an accumulation of spermine during ovary senescence. Finally, the levels of SAMdC transcripts in leaves and shoots w…

Adenosylmethionine DecarboxylaseDNA ComplementaryCarboxy-lyasesMolecular Sequence DataSpermineSaccharomyces cerevisiaePlant ScienceEnvironmentBiologyGene Expression Regulation EnzymologicPisumchemistry.chemical_compoundOzoneGene Expression Regulation PlantGene expressionGeneticsAmino Acid SequenceGeneSequence Homology Amino AcidReproductionGenetic Complementation TestPeasGene Expression Regulation Developmentalfood and beveragesSequence Analysis DNAbiology.organism_classificationCell biologyPlant LeavesBiochemistrychemistryAdenosylmethionine decarboxylaseFruitCallusMutationSperminePolyamineSequence AlignmentCell DivisionPlant ShootsPlanta
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