Search results for "MESH : Transcription"

showing 2 items of 12 documents

Effects of a high-fat diet on energy metabolism and ROS production in rat liver.

2011

International audience; BACKGROUND & AIMS: A high-fat diet affects liver metabolism, leading to steatosis, a complex disorder related to insulin resistance and mitochondrial alterations. Steatosis is still poorly understood since diverse effects have been reported, depending on the different experimental models used. METHODS: We hereby report the effects of an 8 week high-fat diet on liver energy metabolism in a rat model, investigated in both isolated mitochondria and hepatocytes. RESULTS: Liver mass was unchanged but lipid content and composition were markedly affected. State-3 mitochondrial oxidative phosphorylation was inhibited, contrasting with unaffected cytochrome content. Oxidative…

Mitochondrial ROSMaleTranscription GeneticMESH : Reactive Oxygen SpeciesMitochondria LiverMESH : HepatocytesMitochondrionOxidative PhosphorylationMESH: Hepatocytes0302 clinical medicineMESH: Membrane Potential MitochondrialCitrate synthaseMESH: AnimalsBeta oxidationMESH : Electron Transport2. Zero hungerMembrane Potential Mitochondrial0303 health sciencesMESH : RatsAdenine nucleotide translocatorMESH: Energy MetabolismMESH: Reactive Oxygen SpeciesLipidsBiochemistryLiverMESH: Dietary FatsMitochondrial matrix030220 oncology & carcinogenesisBody CompositionMESH : Oxidative PhosphorylationATP–ADP translocaseMESH: Mitochondria LiverMESH: RatsMESH : Body CompositionMESH : MaleOxidative phosphorylationBiologyMESH : Rats WistarElectron Transport03 medical and health sciencesMESH: Oxidative Phosphorylation[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyAnimals[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyRats WistarMESH: Electron Transport[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular Biology030304 developmental biologyHepatologyMESH: Transcription GeneticMESH : Transcription GeneticMESH : LiverMESH : LipidsMESH: Body CompositionMESH: Rats WistarMESH: LipidsDietary FatsMESH: MaleRatsMESH : Energy MetabolismMESH : Membrane Potential MitochondrialMESH : Mitochondria Liverbiology.proteinHepatocytesMESH : AnimalsEnergy MetabolismReactive Oxygen SpeciesMESH : Dietary FatsMESH: Liver
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Annotation of microsporidian genomes using transcriptional signals

2012

EA GenoSol CT3; International audience; High-quality annotation of microsporidian genomes is essential for understanding the biological processes that govern the development of these parasites. Here we present an improved structural annotation method using transcriptional DNA signals. We apply this method to re-annotate four previously annotated genomes, which allow us to detect annotation errors and identify a significant number of unpredicted genes. We then annotate the newly sequenced genome of Anncaliia algerae. A comparative genomic analysis of A. algerae permits the identification of not only microsporidian core genes, but also potentially highly expressed genes encoding membrane-asso…

Transcription Geneticgenome annotationMESH : Molecular Sequence AnnotationGeneral Physics and AstronomyMESH: PhosphotransferasesGenometranscriptional signalMESH : Protein TransportMESH : Fungal ProteinsDNA FungalConserved SequenceComputingMilieux_MISCELLANEOUSGenetics0303 health sciencesFungal proteinMESH: Conserved SequenceMultidisciplinaryMESH: Genomics030302 biochemistry & molecular biologyGenomicsGenome projectProtein TransportMolecular Sequence Annotation[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]MESH: Genome FungalMESH: Fungal ProteinsMESH : PhosphotransferasesGenome FungalTransposable elementMESH: Protein TransportGenes FungalGenomicsMESH: Molecular Sequence AnnotationMESH : MicrosporidiaMESH : Open Reading FramesComputational biologyBiologyGeneral Biochemistry Genetics and Molecular BiologyFungal ProteinsOpen Reading Frames03 medical and health sciencesMESH : Conserved Sequence[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Anncaliia algeraeparasitic diseasesGene030304 developmental biologybioinformaticMESH: Transcription GeneticMESH : Genome FungalPhosphotransferasesstructural annotationMESH : GenomicsfungiMESH : Transcription GeneticMolecular Sequence AnnotationGeneral ChemistryMESH: Open Reading FramesMESH: MicrosporidiaMESH: DNA FungalmicrosporidiaMESH : Genes Fungal[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]MESH : DNA FungalMESH: Genes FungalNature Communications
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