Search results for "MIZA"
showing 10 items of 3318 documents
Species disparity response to mutagenesis of marine yeasts for the potential production of biodiesel.
2019
Abstract Background Among the third-generation biodiesel feed stock, oleaginous marine yeasts are the least studied microorganisms for such purpose. Results Wild strains yeasts were isolated from various Tunisian marine sources including fish waste (Candida tenuis CtTun15, Debaryomyces hansenii DhTun2015, Trichosporon asahii TaTun15 and Yarrowia lipolytica YlTun15) and seawater (Rhodotorula mucilaginosa RmTun15). Following incubation with ethyl methanesulfonate (EMS: 75 mM) for various periods of time (T15, T30, T45, T60 min), the cell viability of these strains responded differentially according to yeast species. For instance, mutated CtTun15 did not survive after 30 min of EMS treatment; …
Value of information in multiple criteria decision making: an application to forest conservation
2019
Abstract Developing environmental conservation plans involves assessing trade-offs between the benefits and costs of conservation. The benefits of conservation can be established with ecological inventories or estimated based on previously collected information. Conducting ecological inventories can be costly, and the additional information may not justify these costs. To clarify the value of these inventories, we investigate the multiple criteria value of information associated with the acquisition of improved ecological data. This information can be useful when informing the decision maker to acquire better information. We extend the concept of the value of information to a multiple crite…
Potential of using data assimilation to support forest planning
2017
Uncertainty in forest information typically results in economic and ecological losses as a consequence of suboptimal management decisions. Several techniques have been proposed to handle such uncertainties. However, these techniques are often complex and costly. Data assimilation (DA) has recently been advocated as a tool that may reduce the uncertainty, thereby improving the quality of forest planning results. It offers an opportunity to make use of all new sources of information in a systematic way and thus provides more accurate and up-to-date information to forest planning. In this study, we refer to literature on handling uncertainties in forest planning, as well as related literature…
Efficient estimation of generalized linear latent variable models.
2019
Generalized linear latent variable models (GLLVM) are popular tools for modeling multivariate, correlated responses. Such data are often encountered, for instance, in ecological studies, where presence-absences, counts, or biomass of interacting species are collected from a set of sites. Until very recently, the main challenge in fitting GLLVMs has been the lack of computationally efficient estimation methods. For likelihood based estimation, several closed form approximations for the marginal likelihood of GLLVMs have been proposed, but their efficient implementations have been lacking in the literature. To fill this gap, we show in this paper how to obtain computationally convenient estim…
Data-Based Forest Management with Uncertainties and Multiple Objectives
2016
In this paper, we present an approach of employing multiobjective optimization to support decision making in forest management planning. The planning is based on data representing so-called stands, each consisting of homogeneous parts of the forest, and simulations of how the trees grow in the stands under different treatment options. Forest planning concerns future decisions to be made that include uncertainty. We employ as objective functions both the expected values of incomes and biodiversity as well as the value at risk for both of these objectives. In addition, we minimize the risk level for both the income value and the biodiversity value. There is a tradeoff between the expected val…
Variational Approximations for Generalized Linear Latent Variable Models
2017
Generalized linear latent variable models (GLLVMs) are a powerful class of models for understanding the relationships among multiple, correlated responses. Estimation, however, presents a major challenge, as the marginal likelihood does not possess a closed form for nonnormal responses. We propose a variational approximation (VA) method for estimating GLLVMs. For the common cases of binary, ordinal, and overdispersed count data, we derive fully closed-form approximations to the marginal log-likelihood function in each case. Compared to other methods such as the expectation-maximization algorithm, estimation using VA is fast and straightforward to implement. Predictions of the latent variabl…
OMICfpp: a fuzzy approach for paired RNA-Seq counts
2019
© The Author(s) 2019.
Quantifying and resolving conservation conflicts in forest landscapes via multiobjective optimization
2017
Environmental planning for of the maintenance of different conservation objectives should take into account multiple contrasting criteria based on alternative uses of the landscape. We develop new concepts and approaches to describe and measure conflicts among conservation objectives and for resolving them via multiobjective optimization. To measure conflicts we introduce a compatibility index that quantifies how much targeting a certain conservation objective affects the capacity of the landscape for providing another objective. To resolve such conflicts we find compromise solutions defined in terms of minimax regret, i.e. minimizing the maximum percentage of deterioration among conservati…
Multi-application Based Network-on-Chip Design for Mesh-of-Tree Topology Using Global Mapping and Reconfigurable Architecture
2019
This paper outlines a multi-application mapping for Mesh-of-Tree (MoT) topology based Network-on-Chip (NoC) design using reconfigurable architecture. A two phase Particle Swarm Optimization (PSO) has been proposed for reconfigurable architecture to minimize the communication cost. In first phase global mapping is done by combining multiple applications and in second phase, reconfiguration is achieved by switching the cores to near by routers using multiplexers. Experimentations have been carried out for several application benchmarks and synthetic applications generated using TGFF tool. The results show significant improvement in terms of communication cost after reconfiguration.
Fault-Tolerant Network-on-Chip Design for Mesh-of-Tree Topology Using Particle Swarm Optimization
2018
As the size of the chip is scaling down the density of Intellectual Property (IP) cores integrated on a chip has been increased rapidly. The communication between these IP cores on a chip is highly challenging. To overcome this issue, Network-on-Chip (NoC) has been proposed to provide an efficient and a scalable communication architecture. In the deep sub-micron level NoCs are prone to faults which can occur in any component of NoC. To build a reliable and robust systems, it is necessary to apply efficient fault-tolerant techniques. In this paper, we present a flexible spare core placement in Mesh-of-Tree (MoT) topology using Particle Swarm Optimization (PSO) by considering IP core failures…