Search results for "MLSA"

showing 3 items of 3 documents

Assessment of Multilocus Sequence Analysis (MLSA) for Identification of Candidatus Liberibacter Solanacearum from Different Host Plants in Spain

2020

19 Pág.

0106 biological sciences0301 basic medicineMicrobiology (medical)MLSACitrusCandidatus Liberibacterzebra chipSequence analysisParsnipsSingle-nucleotide polymorphism01 natural sciencesMicrobiologyZebra chipArticlecitrus03 medical and health sciencesCarrotsLiberibacterCarrotVirologyH20 Plant diseasesPotatoesGeneParsniplcsh:QH301-705.5carrotGenetics<i>Liberibacter</i>biologyceleryHaplotypeCeleryRibosomal RNAbiology.organism_classificationHousekeeping geneZebra chipHLB030104 developmental biologylcsh:Biology (General)parsnippotatoPotato010606 plant biology & botanyMicroorganisms
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A multilocus sequence analysis scheme for characterization of Flavobacterium columnare isolates

2015

Background Columnaris disease caused by Flavobacterium columnare is a serious problem in aquaculture, annually causing large economic losses around the world. Despite considerable research, the molecular epidemiology of F. columnare remains poorly understood. Methods We investigated the population structure and spatiotemporal changes in the genetic diversity of F. columnare population in Finland by using a multilocus sequence typing (MLST) and analysis (MLSA) based on DNA sequence variation within six housekeeping genes. A total of 83 strains of F. columnare were collected from eight different areas located across the country between 2003 and 2012. Results Partial sequencing of six housekee…

Microbiology (medical)DNA BacterialGenotypeSequence analysisPopulationMolecular Sequence DataSequence HomologyclonalityAquacultureMLST/MLSA schemeMicrobiologyFlavobacteriumFlavobacterium columnareFish DiseasesFlavobacteriaceae InfectionsGenetic variationAnimalsCluster Analysis14. Life underwatereducationRecombination rateFinlandPhylogenyGeneticsrecombination rateClonalFrameGenetic diversityeducation.field_of_studyMolecular EpidemiologyGenes EssentialbiologyPhylogenetic treeMolecular epidemiologyGenetic VariationSequence Analysis DNAbiology.organism_classificationFlavobacterium columnareMultilocus sequence typingResearch ArticleClonalityMultilocus Sequence TypingBMC Microbiology
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Race typing and molecular characterization of Xanthomonas campestris pv. campestris strains occurring in Italy

2015

Xanthomonas canepstris campestri race typing MLSTXanthomonas campestris pv. campestris MLSA rase typing
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