Search results for "MUTATION"

showing 10 items of 2830 documents

Boolean Networks: A Primer

2021

Abstract Autism Spectrum Disorders (ASDs) stand out as a relevant example where omics-data approaches have been extensively and successfully employed. For instance, an outstanding outcome of the Autism Genome Project relies in the identification of biomarkers and the mapping of biological processes potentially implicated in ASDs’ pathogenesis. Several of these mapped processes are related to molecular and cellular events (e.g., synaptogenesis and synapse function, axon growth and guidance, etc.) that are required for the development of a correct neuronal connectivity. Interestingly, these data are consistent with results of brain imaging studies of some patients. Despite these remarkable pr…

Computer scienceIn silicoAttractor Autism spectrum disorders (ASDs) Axon guidance Basin of attraction Boolean network BoolNet Computational model Copy number variants (CNVs) Growth cone In silico mutagenesis Mutations Neurodevelopmental disorders Systems biologyGenome projectComputational biologyGene mutationmedicine.diseasePhenotypeEndophenotypemental disordersmedicineAutismIdentification (biology)Function (biology)
researchProduct

Using interactive evolutionary algorithms to help fit cochlear implants

2010

Computer sciencebusiness.industryMutation (genetic algorithm)CrossoverEvolutionary algorithmInitializationArtificial intelligenceMachine learningcomputer.software_genrebusinesscomputer
researchProduct

AC Switching of Relaxor PLZT Ceramics

2005

The switching under application of bipolar ac field is studied by recording of the hysteresis loops in wide temperature and field range in PLZT x/65/35 ceramics. The qualitative difference of the shape of hysteresis loops above and below the freezing temperature is attributed to backswitching in relaxor phase due to the depolarization field produced by the bound charges located at the interphase boundaries. The application of the quasistatic approach to analysis of the experimental data allows us to obtain parameters of the distribution function of local coercive fields from the field dependence of the switching charge derivative on field.

Condensed Matter::Materials ScienceHysteresisDistribution functionMaterials scienceCondensed matter physicsField dependenceCommutationCoercivityCondensed Matter PhysicsPolarization (waves)Local fieldQuasistatic processElectronic Optical and Magnetic MaterialsFerroelectrics
researchProduct

Pseudo-bosons and Riesz Bi-coherent States

2016

After a brief review on D-pseudo-bosons we introduce what we call Riesz bi-coherent states, which are pairs of states sharing with ordinary coherent states most of their features. In particular, they produce a resolution of the identity and they are eigenstates of two different annihilation operators which obey pseudo-bosonic commutation rules.

Condensed Matter::Quantum GasesIdentity (mathematics)Theoretical physicsAnnihilationRiesz representation theoremQuantum mechanicsCoherent statesCommutationEigenvalues and eigenvectorsMathematicsResolution (algebra)Boson
researchProduct

The Study of Carbamoyl Phosphate Synthetase 1 Deficiency Sheds Light on the Mechanism for Switching On/Off the Urea Cycle

2015

12 páginas, 4 figuras, 2 tablas.

Conformational changeCarbamoyl-Phosphate Synthase I Deficiency DiseaseAllosteric regulationCarbamoyl-Phosphate Synthase (Ammonia)Urea cycle diseases610 Medicine & healthBiologyMolecular Dynamics Simulationurologic and male genital diseases03 medical and health sciences0302 clinical medicineGlutamates1311 GeneticsAmmoniaEnzyme StabilityGeneticsmedicine1312 Molecular BiologyHumansUreaHyperammonemiaSite-directed mutagenesisMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesSite-directed mutagenesisurogenital systemMutagenesisCarbamoyl phosphate synthetase 1HyperammonemiaCarbamoyl phosphate synthetasemedicine.diseaseAllosteric regulation3. Good healthProtein Structure TertiaryRestrained molecular dynamicsKineticsEnzymeBiochemistrychemistry10036 Medical ClinicEnzymeUrea cycleMutationInborn errors030217 neurology & neurosurgerySignal Transduction
researchProduct

Molecular architecture of a toxin pore: a 15-residue sequence lines the transmembrane channel of staphylococcal alpha-toxin.

1996

Staphylococcus aureus alpha-toxin is a hydrophilic polypeptide of 293 amino acids that produces heptameric transmembrane pores. During assembly, the formation of a pre-pore precedes membrane permeabilization; the latter is linked to a conformational change in the oligomer. Here, 41 single-cysteine replacement toxin mutants were thiol-specifically labelled with the polarity-sensitive fluorescent probe acrylodan. After oligomerization on membranes, only the mutants with acrylodan attached to residues in the sequence 118-140 exhibited a marked blue shift in the fluorescence emission maximum, indicative of movement of the fluorophore to a hydrophobic environment. Within this region, two functio…

Conformational changeStaphylococcus aureusProtein ConformationMembrane lipidsBacterial ToxinsMolecular Sequence DataBiologyGeneral Biochemistry Genetics and Molecular BiologyCell membraneHemolysin ProteinsProtein structure2-NaphthylaminemedicinePoint MutationAmino Acid SequenceCysteineMolecular BiologyPeptide sequenceFluorescent Dyeschemistry.chemical_classificationBinding SitesGeneral Immunology and MicrobiologyMolecular StructureGeneral NeuroscienceCell MembraneTransmembrane proteinAmino acidmedicine.anatomical_structureMembraneSpectrometry FluorescenceBiochemistrychemistryLiposomesBiophysicsMutagenesis Site-DirectedResearch ArticleThe EMBO journal
researchProduct

Strong Cooperativity and Loose Geometry between CUB Domains Are the Basis for Procollagen C-Proteinase Enhancer Activity

2009

Procollagen C-proteinase enhancers (PCPE-1 and -2) specifically activate bone morphogenetic protein-1 (BMP-1) and other members of the tolloid proteinase family during C-terminal processing of fibrillar collagen precursors. PCPEs consist of two CUB domains (CUB1 and CUB2) and one NTR domain separated by one short and one long linker. It was previously shown that PCPEs can strongly interact with procollagen molecules, but the exact mechanism by which they enhance BMP-1 activity remains largely unknown. Here, we used a series of deletion mutants of PCPE-1 and two chimeric constructs with repetitions of the same CUB domain to study the role of each domain and linker. Out of all the forms teste…

CooperativityPlasma protein bindingTransfectionBinding CompetitiveBiochemistryBone morphogenetic protein 1Bone Morphogenetic Protein 1Cell LineHumansAmino Acid SequenceBinding siteEnhancerMolecular BiologyGlycoproteinsExtracellular Matrix ProteinsBinding SitesEnzyme Catalysis and RegulationChemistryCircular DichroismCell BiologyCUB domainKineticsProcollagen peptidaseBiochemistryMutationBiophysicsElectrophoresis Polyacrylamide GelLinkerProcollagenProtein BindingJournal of Biological Chemistry
researchProduct

Mutation Analysis of Core Binding Factor A1 in Patients with Cleidocranial Dysplasia

1999

SummaryCleidocranial dysplasia (CCD) is a dominantly inherited disorder characterized by patent fontanelles, wide cranial sutures, hypoplasia of clavicles, short stature, supernumerary teeth, and other skeletal anomalies. We recently demonstrated that mutations in the transcription factor CBFA1, on chromosome 6p21, are associated with CCD. We have now analyzed the CBFA1 gene in 42 unrelated patients with CCD. In 18 patients, mutations were detected in the coding region of the CBFA1 gene, including 8 frameshift, 2 nonsense, and 9 missense mutations, as well as 2 novel polymorphisms. A cluster of missense mutations at arginine 225 (R225) identifies this residue as crucial for CBFA1 function. …

Core binding factorRecombinant Fusion ProteinsDNA Mutational AnalysisGreen Fluorescent ProteinsMolecular Sequence DataMutation MissenseHuman malformation syndromeCore Binding Factor Alpha 1 SubunitBiologyTransfectionmedicine.disease_causeBone and BonesCleidocranial dysplasiaCell LineFrameshift mutationCBFA1GeneticsmedicineHumansMissense mutationGenetics(clinical)SupernumeraryFrameshift MutationGenetics (clinical)Sequence DeletionGeneticsMutationPolymorphism GeneticCleidocranial DysplasiaCore Binding FactorsArticlesmedicine.diseaseOsteochondrodysplasiaNeoplasm ProteinsRadiographyNuclear localizationLuminescent ProteinsPhenotypeMicroscopy FluorescenceMutation testingTranscription factorHaploinsufficiencyToothTranscription FactorsThe American Journal of Human Genetics
researchProduct

Familial mediterranean fever gene (MEVF) mutations in Crohnʼs disease in a Mediterranean area

2008

Crohn's diseasebusiness.industryGastroenterologyCase-control studyFamilial Mediterranean fevermedicine.diseasePyrin domainFAMILIAL MEDITERRANEAN FEVER GENEImmunologyMutation (genetic algorithm)medicineImmunology and AllergybusinessAllele frequencyCohort studyInflammatory Bowel Diseases
researchProduct

Gametic embryogenesis and haploid technology as valuable support to plant breeding

2011

Plant breeding is focused on continuously increasing crop production to meet the needs of an ever-growing world population, improving food quality to ensure a long and healthy life and address the problems of global warming and environment pollution, together with the challenges of developing novel sources of biofuels. The breeders' search for novel genetic combinations, with which to select plants with improved traits to satisfy both farmers and consumers, is endless. About half of the dramatic increase in crop yield obtained in the second half of the last century has been achieved thanks to the results of genetic improvement, while the residual advance has been due to the enhanced managem…

Crops AgriculturalPlant geneticsFlowersPlant ScienceBreedingHaploidyBiologyChromosomes PlantRegenerationPlant breedingGametogenesis Plantbusiness.industryCrop yieldHomozygotefungiPest controlfood and beveragesAgricultureGeneral MedicineWorld populationBiotechnologySettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeAgricultureMutationDoubled haploidyPollenPloidybusinessGametic embryogenesis plant breeding haploidAgronomy and Crop ScienceBiotechnologyPlant Cell Reports
researchProduct