Search results for "Matrix"

showing 10 items of 3205 documents

A Novel Semi-Supervised Methodology for Extracting Tumor Type-Specific MRS Sources in Human Brain Data

2013

Background: The clinical investigation of human brain tumors often starts with a non-invasive imaging study, providing \ud information about the tumor extent and location, but little insight into the biochemistry of the analyzed tissue. Magnetic \ud Resonance Spectroscopy can complement imaging by supplying a metabolic fingerprint of the tissue. This study analyses \ud single-voxel magnetic resonance spectra, which represent signal information in the frequency domain. Given that a single \ud voxel may contain a heterogeneous mix of tissues, signal source identification is a relevant challenge for the problem of\ud tumor type classification from the spectroscopic signal.\ud Methodology/Princ…

Magnetic Resonance SpectroscopyStatistics as TopicBioinformaticsSignalDiagnostic RadiologyEngineeringDiscriminative modelBasic Cancer ResearchMathematical ComputingNeurological TumorsComplement (set theory)PhysicsMultidisciplinaryBrain NeoplasmsApplied MathematicsQRBrainMagnetic Resonance ImagingIdentification (information)OncologyFrequency domainMetric (mathematics)MedicineRadiologyAlgorithmsResearch ArticleScienceLipid signalingGlioblastoma multiformeMatrix decompositionRC0254Magnetic resonance imagingCancer detection and diagnosisMagnetic resonance spectroscopyCancer Detection and DiagnosisHumansPrototypesbusiness.industryFingerprint (computing)Cancers and NeoplasmsData acquisitionPattern recognitionComputing MethodsR1Computer ScienceSignal ProcessingRC0321Artificial intelligencebusinessMathematics
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Triplet-triplet energy transfer controlled by the donor-acceptor distance in rigidly held palladium-containing cofacial bisporphyrins.

2005

Eleven new complexes, including mono-, heterobi-, and homobimetallic cofacial bisporphyrins, (Pd)H 2 DPS, (M)H 2 DPX, (M)H 2 DPB, (PdZn)DPS, (PdZn)DPX, (Pt) 2 DPX, (M) 2 DPB (M=Pd, Pt), and (Pt)P (DPS 4 - = 4,6-bis[5-(2,8,13,17-tetraethyl-3,7,12,18-tetramethylporphyrinyl)]dibenzothiophene tetraanion, DPX 4 - = 4,5-bis[5-(2,8,13,17-tetraethyl-3,7,12,18-tetramethylporphyrinyl)]-9,9-dimethylxanthene tetraanion, DPB 4 - =1,8-bis[5-(2,8,13,17-tetraethyl-3,7,12,18-tetramethylporphyrinyl)]biphenylene tetraanion, P 2 - = 5-phenyl-2,8,13,17-tetraethyl-3,7,12,18-tetramethylporphyrin dianion) have been synthesized and characterized. The photophysical properties of the donor (M)P (M=Pd or Pt, P= porphy…

Magnetic Resonance SpectroscopyStereochemistryMetalloporphyrinschemistry.chemical_elementCrystal structureThiophenesTriclinic crystal systemCrystallography X-RayCatalysischemistry.chemical_compoundReaction rate constantPlatinumMolecular StructureOrganic ChemistryFree baseGeneral ChemistryBiphenyleneAcceptorPorphyrinCrystallographyZincchemistryEnergy TransferXanthenesSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationLuminescent MeasurementsSpectrophotometry UltravioletPalladiumPalladiumChemistry (Weinheim an der Bergstrasse, Germany)
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Novel O-antigen of Hafnia alvei PCM 1195 lipopolysaccharide with a teichoic acid-like structure

2009

Abstract The lipopolysaccharide (LPS) of Hafnia alvei strain PCM 1195 was obtained by the hot phenol/water method. The O-specific polysaccharide was released by mild acidic hydrolysis and isolated by gel filtration. The structure of the O-specific polysaccharide was investigated by 1 H, 13 C, and 31 P NMR spectroscopy, MALDI-TOF MS, and GC–MS, accompanied by monosaccharide and methylation analysis. It was concluded that the O-specific polysaccharide is composed of a hexasaccharide repeating units interlinked with a phosphate group: {→4-α- d -Glc p -(1→3)-α- l - Fuc p NAc-(1→3)-[α- d -Glc p -(1→4)]-α- d -Glc p NAc-(1→3)-α- l - Fuc p NAc-(1→4)-α- d -Glc p -(1→P} n .

Magnetic Resonance SpectroscopyStereochemistryMolecular Sequence DataSize-exclusion chromatographyPolysaccharideBiochemistryAnalytical ChemistryHydrolysischemistry.chemical_compoundMonosaccharidechemistry.chemical_classificationTeichoic acidbiologyHydrolysisOrganic ChemistryO AntigensHafnia alveiGeneral MedicineNuclear magnetic resonance spectroscopyHafniabiology.organism_classificationTeichoic Acidscarbohydrates (lipids)Carbohydrate SequencechemistryBiochemistrySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationPhosphodiester bondCarbohydrate Research
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Disulfide-crosslinked hyaluronan-gelatin hydrogel films: a covalent mimic of the extracellular matrix for in vitro cell growth

2003

A new disulfide crosslinking method was developed for the preparation of blended hyaluronan (HA)-gelatin hydrogels to form a synthetic, covalently linked mimic of the extracellular matrix (ECM). The HA and gelatin were chemically modified using 3,3′-dithiobis(propionic hydrazide) (DTP). After reduction with dithiothreitol (DTT), the thiol derivatives of HA (HA-DTPH) and gelatin (gelatin-DTPH) were obtained and characterized. To minimize interference with biological function, the degree of substitution of HA-DTPH and gelatin-DTPH was kept below 50%. Solutions of HA-DTPH and gelatin-DTPH in varying blends (20%, 40%, 60%, 80% gelatin) were prepared in 1% w/v NaCl and crosslinked by disulfide b…

Magnetic Resonance SpectroscopyTime FactorsBiocompatible MaterialsSodium ChlorideGelatinHydrogel Polyethylene Glycol DimethacrylateDithiothreitolCell growthMicechemistry.chemical_compoundHyaluronic acidDisulfidesHyaluronic Acidchemistry.chemical_classificationMice Inbred BALB CBiomaterialHydrogels3T3 CellsMethylgalactosidesExtracellular MatrixCross-Linking ReagentsMechanics of MaterialsCovalent bondSelf-healing hydrogelsThiolCell DivisionBiotechnologyfood.ingredientMaterials scienceCell SurvivalBiomedical EngineeringBiophysicsHyaluronoglucosaminidaseBioengineeringmacromolecular substancesIn Vitro TechniquesHydrazideBiomaterialsDisulfidefoodPolymer chemistryCell AdhesionAnimalsSulfhydryl Compoundstechnology industry and agricultureFibroblastsBiomaterialDithiothreitolModels ChemicalchemistryCeramics and CompositesGelatinPolystyrenesBiomaterials
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End Capping Ring-Opening Olefin Metathesis Polymerization Polymers with Vinyl Lactones

2008

The selective placement of a functional group at the chain end of a ring-opening metathesis polymer using ruthenium carbene initiators has been a significant limitation. Here we demonstrate a highly effective and facile end-capping technique for ROMP with living ruthenium carbene chain ends using single-turnover olefin metathesis substrates. Vinylene carbonate and 3H-furanone are introduced as functionalization and termination agents for the ruthenium-initiated ring-opening metathesis polymerization. This leads directly to the formation of functional polymer end groups without further chemical transformation steps. Aldehyde and carboxylic acid end groups can be introduced by this new method…

Magnetic Resonance SpectroscopyTime FactorsPolymerschemistry.chemical_elementDioxolesAlkenesMetathesisBiochemistryRutheniumCatalysisLactoneschemistry.chemical_compoundColloid and Surface ChemistryPolymer chemistryOrganometallic CompoundsRing-opening metathesis polymerisationMolecular StructureTransition metal carbene complexStereoisomerismGeneral ChemistryROMPReference StandardsRutheniumPolymerizationchemistrySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationMethaneCarbeneAcyclic diene metathesisJournal of the American Chemical Society
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Natural selection mediated by seasonal time constraints increases the alignment between evolvability and developmental plasticity

2021

Abstract Phenotypic plasticity can either hinder or promote adaptation to novel environments. Recent studies that have quantified alignments between plasticity, genetic variation, and divergence propose that such alignments may reflect constraints that bias future evolutionary trajectories. Here, we emphasize that such alignments may themselves be a result of natural selection and do not necessarily indicate constraints on adaptation. We estimated developmental plasticity and broad sense genetic covariance matrices (G) among damselfly populations situated along a latitudinal gradient in Europe. Damselflies were reared at photoperiod treatments that simulated the seasonal time constraints ex…

Male0106 biological sciences0301 basic medicinelife historyOdonata01 natural sciencesG‐matrixphenotypic plasticityDivergenceEvolutionsbiologiG&#8208time constraintsdevelopmental biassopeutuminenNatural selectionluonnonvalintalatitudeAdaptation PhysiologicalBiological EvolutionOriginal ArticleFemaleSeasonsGeneral Agricultural and Biological Sciencesympäristönmuutoksetgenetic constraintsPhotoperiodevoluutioLestesBiology010603 evolutionary biology03 medical and health sciencesGeneticsAnimalsSelection GeneticAdaptationEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Phenotypic plasticityEvolutionary BiologyhentosudenkorennotGenetic VariationOriginal Articlesbiology.organism_classificationmatrixEvolvability030104 developmental biologyEvolutionary biologyDevelopmental plasticityfenotyyppiAdaptation
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Vitronectin as a molecular player of the tumor microenvironment in neuroblastoma

2019

Background Vitronectin is a multifunctional glycoprotein known in several human tumors for its adhesive role in processes such as cell growth, angiogenesis and metastasis. In this study, we examined vitronectin expression in neuroblastoma to investigate whether this molecule takes part in cell-cell or cell-extracellular matrix interactions that may confer mechanical properties to promote tumor aggressiveness. Methods We used immunohistochemistry and image analysis tools to characterize vitronectin expression and to test its prognostic value in 91 neuroblastoma patients. To better understand the effect of vitronectin, we studied its in vitro expression using commercial neuroblastoma cell lin…

Male0301 basic medicineCancer ResearchAngiogenesislcsh:RC254-282MetastasisExtracellular matrixMice03 medical and health sciencesNeuroblastoma0302 clinical medicineCell Line TumorNeuroblastomaImage Interpretation Computer-AssistedTumor MicroenvironmentGeneticsmedicineAnimalsHumansDigital pathologyVitronectinMigrationTumor microenvironmentbiologyCell growthChemistryExtracellular matrixlcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogensPrognosismedicine.diseaseSurvival AnalysisUp-RegulationGene Expression Regulation Neoplastic030104 developmental biologyOncology030220 oncology & carcinogenesisCancer researchbiology.proteinImmunohistochemistryFemaleVitronectinNeoplasm TransplantationResearch Article
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β1 integrin signaling promotes neuronal migration along vascular scaffolds in the post-stroke brain

2017

Cerebral ischemic stroke is a main cause of chronic disability. However, there is currently no effective treatment to promote recovery from stroke-induced neurological symptoms. Recent studies suggest that after stroke, immature neurons, referred to as neuroblasts, generated in a neurogenic niche, the ventricular-subventricular zone, migrate toward the injured area, where they differentiate into mature neurons. Interventions that increase the number of neuroblasts distributed at and around the lesion facilitate neuronal repair in rodent models for ischemic stroke, suggesting that promoting neuroblast migration in the post-stroke brain could improve efficient neuronal regeneration. To move t…

Male0301 basic medicineChain migrationlcsh:MedicineExtracellular matrixNeural Stem CellsCell MovementLamininCells CulturedMice KnockoutNeuronslcsh:R5-920Mice Inbred ICRMicroscopy ConfocalTissue ScaffoldsbiologyIntegrin beta1BrainCell migrationGeneral MedicineCell biologyStrokeVasculature-guided migrationFemaleBlood vesselmedicine.symptomlcsh:Medicine (General)Signal TransductionResearch Paperanimal structuresIntegrinMice TransgenicGeneral Biochemistry Genetics and Molecular BiologyLesion03 medical and health sciencesNeuroblastβ1 integrinNeuroblast migrationmedicineAnimalsRegeneration (biology)lcsh:RCoculture TechniquesMicroscopy Electron030104 developmental biologynervous systemAstrocytesImmunologybiology.proteinBlood VesselsLamininEBioMedicine
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Intake of Vitamin K Antagonists and Worsening of Cardiac and Vascular Disease: Results From the Population‐Based Gutenberg Health Study

2018

Background Preclinical data have indicated a link between use of vitamin K antagonists ( VKA ) and detrimental effects on vascular structure and function. The objective of the present study was to determine the relationship between VKA intake and different phenotypes of subclinical cardiovascular disease in the population. Methods and Results Clinical and laboratory data, as well as medical–technical examinations were assessed from 15 010 individuals aged 35 to 74 years during a highly standardized 5‐hour visit at the study center of the population‐based Gutenberg Health Study. In total, the study sample comprised 287 VKA users and 14 564 VKA nonusers. Multivariable analysis revealed an in…

Male0301 basic medicineEpidemiologyPROGRESSION030204 cardiovascular system & hematologyVitamin kCarotid Intima-Media ThicknessTHERAPYGastroenterologyAdrenomedullin0302 clinical medicineRisk Factorscardiovascular diseaseGermanyAtrial FibrillationNatriuretic Peptide BrainMatrix gla proteinOriginal ResearchVenous Thrombosisoral anticoagulationRISKbiologyMiddle AgedStrokevitamin K antagonistsC-Reactive ProteinCardiovascular DiseasesFemaleCardiology and Cardiovascular MedicineAtrial Natriuretic Factormedicine.drugAdultmedicine.medical_specialtyPopulation basedMATRIX GLA-PROTEINWARFARIN03 medical and health sciencesVascular StiffnessInternal medicineORAL ANTICOAGULANTmedicineHumansAnkle Brachial IndexVascular structureProtein PrecursorsAgedInflammationVascular diseasebusiness.industryWarfarinAnticoagulantsFibrinogenStroke Volumepharmacogenomic variantsARTERIALmedicine.diseasePreclinical dataPeptide FragmentsCALCIFICATION030104 developmental biologyAsymptomatic DiseasesPhenprocoumonbiology.proteinPulmonary EmbolismbusinessCalcificationJournal of the American Heart Association
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Extra collagen overlay prolongs the differentiated phenotype in sandwich-cultured rat hepatocytes

2018

INTRODUCTION: Sandwich-cultured rat hepatocytes (SCRH) have become an invaluable in vitro model to study hepatic drug disposition. SCRH are maintained between two layers of extracellular matrix. In this configuration, culture periods of 4days are typically applicable. The aim of the present study was to modify conventional SCRH by applying an additional collagen overlay to prolong the hepatic phenotype in SCRH and thus to extend the applicability of the model. METHODS: The cultures receiving an extra top layer ('SCRH-plus' cultures) were compared with the conventional SCRH by testing the morphology, cell functionality, metabolic capacity and Mrp2-activity. RESULTS: In the SCRH-plus cultures…

Male0301 basic medicineGlucuronosyltransferaseCellular differentiationCellCell Culture TechniquesToxicologyExtracellular matrix03 medical and health sciencesBile canaliculiMethodsmedicineAnimalsBileGlucuronosyltransferaseRats WistarCells CulturedPharmacologybiologyCell DifferentiationMetabolismPhenotypeExtracellular MatrixRatsCell biologyPhenotype030104 developmental biologymedicine.anatomical_structureLiverBiochemistryCell cultureToxicityHepatocytesbiology.proteinHepatic drug dispositionCollagenSandwich-cultured hepatocytesJournal of Pharmacological and Toxicological Methods
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