Search results for "Matrix"

showing 10 items of 3205 documents

Tightly bound to DNA proteins: possible universal substrates for intranuclear processes.

2011

Tightly bound to DNA proteins (TBPs) are a protein group that remains attached to DNA after its deproteinization by phenol, chloroform or salting-out. TBP are bound to DNA with covalent phosphotriester or non-covalent ion and hydrogen bonds. They appear to be a vast protein group involved in numerous intranuclear processes. The TBPs fraction co-purified with DNA deproteinized by mild procedures is extremely heterogeneous, tissue and species-specific. The protein fraction co-purified with DNA after harsh deproteinization procedures appears to be formed from few polypeptides common to different species and tissues. Interaction sites between DNA and TBPs depend on the physiological status of t…

Cell NucleusTranscription GeneticHydrogen bondPhosphataseCellGeneral MedicineBiologyNuclear matrixModels BiologicalPhosphoric Monoester HydrolasesDNA-Binding Proteinschemistry.chemical_compoundmedicine.anatomical_structurechemistryBiochemistrySpecies SpecificityTranscription (biology)Covalent bondOrgan SpecificityGeneticsmedicineAnimalsBinding siteDNASerpinsGene
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Neuronal cell cultures: A tool for investigations in developmental neurobiology

1992

The aim of this review is to describe environmental requirements for survival of neuronal cells in culture, and secondly to survey the complex interplay between hormones, neurotrophic factors, transport- and extracellular matrix- proteins, which characterize the developmental program of differentiating neurons. An overall reconsideration of the literature in this vast field is above the limits of the present paper; since progress and refinement in the techniques of neuronal cell cultures have paralleled the advancement in Developmental Neurobiology, we will run instead through the main steps which form the conceptual framework of neuronal cell cultures. © 1992 Plenum Publishing Corporation.

Cell Survivalhormone supplemented-serum free-mediaBiologyBiochemistryExtracellular matrixCellular and Molecular NeuroscienceNeurobiologyNeurotrophic factorsSettore BIO/10 - BiochimicamedicineAnimalsHumansGrowth SubstancesDevelopmental neurobiologybookCells CulturedNeuronsNeuroscience (all)Cell DifferentiationGeneral MedicineCulture Mediamedicine.anatomical_structureCell cultureNeuronal cell culturebook.journalSettore MED/26 - NeurologiaNeuronNeuroscienceNeurochemical Research
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The effects of shock wave stimulation of mesenchymal stem cells on proliferation, migration, and differentiation in an injectable gelatin matrix for …

2020

The treatment of a variety of defects in bony sites could benefit from mitogenic stimulation of osteoprogenitor cells, including endogenous bone marrow-derived mesenchymal stem cells (bMSCs), and from provision of such cells with a matrix permissive of their migration, proliferation, and osteogenic differentiation. That such MSC stimulation could result from treatment with noninvasive (extracorporeal) shock waves (ESWs), and the matrix delivered by injection could enable this therapeutic approach to be employed for applications in which preformed scaffolds and growth factor therapy are difficult to deploy. The objectives of the present study were to investigate focused ESWs for their effect…

Cell Survivalmedicine.medical_treatment0206 medical engineeringBiomedical EngineeringMedicine (miscellaneous)Motility02 engineering and technologyMatrix (biology)InjectionsBiomaterials03 medical and health sciencesCell MovementOsteogenesisIn vivomedicineAnimalsRegenerationCell Proliferation030304 developmental biologyElectroshock0303 health sciencesbiologyChemistryGoatsGrowth factorRegeneration (biology)Mesenchymal stem cellEndoglinCell DifferentiationMesenchymal Stem Cells020601 biomedical engineeringCell biologyCulture Media Conditionedbiology.proteinGelatinPropionatesStem cellBiomarkersPlatelet-derived growth factor receptorJournal of Tissue Engineering and Regenerative Medicine
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TIMP-3 facilitates binding of target metalloproteinases to the endocytic receptor LRP-1 and promotes scavenging of MMP-1.

2020

AbstractMatrix metalloproteinases (MMPs) and the related families of disintegrin metalloproteinases (ADAMs) and ADAMs with thrombospondin repeats (ADAMTSs) play a crucial role in extracellular matrix (ECM) turnover and shedding of cell-surface molecules. The proteolytic activity of metalloproteinases is post-translationally regulated by their endogenous inhibitors, known as tissue inhibitors of metalloproteinases (TIMPs). Several MMPs, ADAMTSs and TIMPs have been reported to be endocytosed by the low-density lipoprotein receptor-related protein-1 (LRP-1). Different binding affinities of these proteins for the endocytic receptor correlate with different turnover rates which, together with di…

Cell biologyTIMP-3 LRP-1 MMP-1 extracellular matrix endocytosis metalloproteinases endocytic receptorlcsh:MedicinePlasma protein bindingMatrix metalloproteinaseBiochemistryArticleExtracellular matrixDisintegrinHumanslcsh:ScienceReceptorTissue Inhibitor of Metalloproteinase-3MetalloproteinaseThrombospondinMultidisciplinarybiologyChemistrylcsh:RLigand (biochemistry)EndocytosisMatrix MetalloproteinasesCell biologyKineticsMultiprotein Complexesbiology.proteinlcsh:Qlipids (amino acids peptides and proteins)Matrix Metalloproteinase 1Low Density Lipoprotein Receptor-Related Protein-1Protein BindingScientific reports
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Molecular evolution of the metazoan extracellular matrix: cloning and expression of structural proteins from the demosponges Suberites domuncula and …

2000

One crucial event during evolution to multicellularity was the development of either direct cell–cell contact or indirect interaction via extracellular matrix (ECM) molecules. The identification of those polypeptides provides conclusive data on the phylogenetic relationship of metazoan phyla and helps us to understand the position of the Metazoa among the other kingdoms. Recently it became evident that the ECM of sponges is amazingly complex; it is composed of fibrous molecules, e.g., collagen, and their corresponding receptors, which are highly similar to those existing in other metazoan phyla. While these data already support the view of monophyly of Metazoa, additional studies are requir…

Cell signalingDNA ComplementaryDermatopontinMolecular Sequence DataGene ExpressionBiologyBioinformaticsTransplantation AutologousExtracellular matrixEvolution MolecularMyotrophinGeneticsAnimalsAmino Acid SequenceCloning MoleculareducationGrowth SubstancesMolecular BiologyPeptide sequenceEcology Evolution Behavior and SystematicsPhylogenyCell Aggregationeducation.field_of_studyExtracellular Matrix ProteinsBase SequenceSequence Homology Amino AcidReceptor Protein-Tyrosine Kinasesbiology.organism_classificationRecombinant ProteinsCell biologyPoriferaSuberites domunculaTransplantationChondroitin Sulfate ProteoglycansIntercellular Signaling Peptides and ProteinsCollagenCarrier ProteinsCell Adhesion MoleculesFunction (biology)Journal of molecular evolution
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A natural-like synthetic small molecule impairs bcr-abl signaling cascades and induces megakaryocyte differentiation in erythroleukemia cells

2013

Over the past years, we synthesized a series of new molecules that are hybrids of spirocyclic ketones as complexity-bearing cores with bi- and ter-phenyls as privileged fragments. Some of these newly-shaped small molecules showed antiproliferative, pro-apoptotic and differentiating activity in leukemia cell lines. In the present study, to investigate more in depth the mechanisms of action of these molecules, the protein expression profiles of K562 cells treated with or without the compounds IND_S1, MEL_T1, IND_S7 and MEL_S3 were analyzed using two-dimensional gel electrophoresis coupled with mass spectrometry. Proteome comparisons revealed several differentially expressed proteins, mainly r…

Cell signalingProteomeMegakaryocyte differentiationCellular differentiationFusion Proteins bcr-abllcsh:MedicineBiologyProteomicsSmall Molecule Librariesbi- and ter-phenylsantiproliferative pro-apoptotic differentiating activity leukemiaMolecular Cell BiologyChemical BiologyBiomarkers TumorCluster AnalysisHumansnetwork analysiRNA Messengerlcsh:ScienceBiologyCell ShapeMultidisciplinaryGene Expression Regulation LeukemicEffectorSystems Biologylcsh:RleukemiaReproducibility of ResultsHNF4-alphaHematologyMolecular biologyNeoplasm ProteinsChemistrycell differentiationSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationMultivariate AnalysisProteomeMedicineEGR1PROTEOMICSlcsh:QLeukemia Erythroblastic AcuteMedicinal ChemistrySignal transductionK562 CellsMegakaryocytesResearch ArticleSignal TransductionK562 cells
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Bio-inorganic Nanomaterials for Biomedical Applications (Bio-silica and Polyphosphate)

2014

Bio-silica represents the main mineral component of the sponge skeletal elements (siliceous spicules), while bio-polyphosphate (polyP), a multifunctional polymer existing in microorganisms and animals, acts, among others, as reinforcement for pores in cell membranes. These natural inorganic bio-polymers, which can be readily prepared, either by recombinant enzymes (bio-silica and polyP) or chemically (polyP), are promising materials/substances for the amelioration and/or treatment of human bone diseases and dysfunctions. Bone defects in human, caused by fractures/nonunions or trauma, have an increasing impact and have become a medical challenge in the present-day aging population. Frequentl…

Cell signalingbiologyChemistryMesenchymal stem cellOsteoporosismedicine.diseasebiology.organism_classificationCell biologyExtracellular matrixHaematopoiesisSpongeRANKLmedicinebiology.proteinStem cell
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Dynamic processes involved in the pre-vascularization of silk fibroin constructs for bone regeneration using outgrowth endothelial cells

2009

For successful bone regeneration tissue engineered bone constructs combining both aspects, namely a high osteogenic potential and a rapid connection to the vascular network are needed. In this study we assessed the formation of pre-vascular structures by human outgrowth endothelial cells (OEC) from progenitors in the peripheral blood and the osteogenic differentiation of primary human osteoblasts (pOB) on micrometric silk fibroin scaffolds. The rational was to gain more insight into the dynamic processes involved in the differentiation and functionality of both cell types depending on culture time in vitro. Vascular tube formation by OEC was assessed quantitatively at one and 4 weeks of cul…

Cell typeBone RegenerationAngiogenesisBiophysicsNeovascularization PhysiologicFibroinBioengineeringMatrix (biology)BiologyBiomaterialsTissue engineeringOsteogenesisHumansProgenitor cellBone regenerationCells CulturedTube formationTissue EngineeringTissue ScaffoldsGuided Tissue RegenerationEndothelial CellsCoculture TechniquesCell biologyMechanics of MaterialsCeramics and CompositesFibroinsBiomarkersBiomedical engineeringBiomaterials
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Alternative splicing products of the tenascin gene distinguish rat liver fat storing cells from arterial smooth muscle cells and skin fibroblasts

1992

Abstract Fat storing-(Ito-)cells (FSC) transform into a myofibroblast-like cell type during liver fibrogenesis. A similar development can be observed in cell culture. At the moment, a definite marker to differentiate transformed FSC from smooth muscle cells (SMC) is not available. We recently found that FSC, SMC and skin fibroblasts (SF) synthesize tenascin, a novel matrix protein. As it is reported that various tissues express different tenascin forms by the mechanism of alternative pre-mRNA splicing, we analyzed the tenascin transcripts in these cell types. Total RNA extracted from cultured FSC, SMC and SF, analyzed by Northern blot hybridization, showed a 7.2 kb transcript in FSC, a 8.7 …

Cell typeCell Adhesion Molecules NeuronalRNA SplicingMolecular Sequence DataBiophysicsGene ExpressionTenascinBiochemistryExtracellular matrixTransforming Growth Factor betaGene expressionAnimalsRNA MessengerNorthern blotMolecular BiologyExtracellular Matrix ProteinsMessenger RNABase SequencebiologyAlternative splicingCell DifferentiationMuscle SmoothRats Inbred StrainsTenascinCell BiologyFibroblastsmusculoskeletal systemMolecular biologyFibronectinsRatsCytoskeletal ProteinsAdipose TissueOligodeoxyribonucleotidesRNA splicingbiology.proteinBiochemical and Biophysical Research Communications
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Cell fate specification in an in vitro model of neural development

1998

We have studied in an in vitro model of neural development the effect of neighboring cells on the fate of single fluorescently labeled precursor cells. In one line of experiments, PCC7-Mz1 embryonal carcinoma cells were transiently transfected with "green fluorescent protein" (GFP) and, following incubation with 0.1 microM all-trans retinoic acid (RA), the number and morphology of derivatives (neuronal or non-neuronal) was determined that form groups of GFP-expressing cells in a surrounding of unlabeled cells. Because single PCC7-Mz1 cells can produce single-lineage and mixed-lineage derivatives, they are individually pluripotent. In another line of experiments, we have analyzed the fate of…

Cell typeHistologyCell SurvivalCellular differentiationGreen Fluorescent ProteinsCell fate determinationBiologyPathology and Forensic MedicineMiceProsencephalonNeurosphereTumor Cells CulturedAnimalsNeuronsExtracellular Matrix ProteinsNeurogenesisCell Differentiation3T3 CellsCell BiologyGeneral MedicineEmbryonic stem cellCell biologyLuminescent ProteinsP19 cellCOS CellsImmunologyStem cellEuropean Journal of Cell Biology
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