Search results for "Medical image"

Metodi automatici di analisi e caratterizzazione di esami radiologici del massiccio facciale.

L'obiettivo di questo lavoro è lo sviluppo di algoritmi e procedure di analisi di referti radiografici digitali di tipo CBCT delle strutture della mandibola e dell’apparato dentario. In particolare, mediante un’opportuna campagna di sperimentazione, in collaborazione con i reparti di radiologia ed odontoiatria del Policlinico di Palermo, è stata realizzata un procedura in grado di: • eliminare i problemi di sovrapponibilità dei referti tridimensionali effettuati in tempi successivi; • identificare lo spazio parodontale su indagini CBCT per la valutazione dei possibili difetti nello stesso e prevedere l’insorgenza di parodontiti. • individuare gli elementi di maggiore interesse medico caratt…

Multi-modal Medical Image Registration by Local Affine Transformations

2018

Image registration is the process of finding the geometric transformation that, applied to the floating image, gives the registered image with the highest similarity to the reference image. Registering a pair of images involves the definition of a similarity function in terms of the parameters of the geometric transformation that allows the registration. This paper proposes to register a pair of images by iteratively maximizing the empirical mutual information through coordinate gradient descent. Hence, the registered image is obtained by applying a sequence of local affine transformations. Rather than adopting a uniformly spaced grid to select image blocks to locally register, as done by s…

Medical image registration: Interpolations, similarities and optimizations strategies

2010

This paper presents a study conducted for evaluating different interpolation schemes, similarity metrics and optimization algorithms for the purpose of volumetric medical image registration. Each technique has been implemented to be plugged in a modular system. Rotation, translation and scale error has been measured to obtain a performance evaluation for all of the combinations of the considered techniques. Several experimental tests were conducted for validation both on synthetic and real datasets providing an exhaustive overview of the various strategies used.

Augmented reality based middle and inner ear surgical procedures

2020

Otologic procedures involve manipulation of small, delicate and complex structures in the temporal bone anatomy which are in close proxmity of critical nerves and blood vessels. Augmented reality (AR) can highly benefit the otological domain by providing supplementary anatomical and navigational information unified on a single display. However, despite being composed of mainly rigid bony structures, the awareness and acceptance of possibilities of AR systems in otology is fairly low. This project aims at developing video-based AR solutions for middle and inner ear surgical procedures.We propose two applications of AR in this regard. In the first application, information about middle ear cle…

Can SegFormer be a True Competitor to U-Net for Medical Image Segmentation?

2023

The U-Net model, introduced in 2015, is established as the state-of-the-art architecture for medical image segmentation, along with its variants UNet++, nnU-Net, V-Net, etc. Vision transformers made a breakthrough in the computer vision world in 2021. Since then, many transformer based architectures or hybrid architectures (combining convolutional blocks and transformer blocks) have been proposed for image segmentation, that are challenging the predominance of U-Net. In this paper, we ask the question whether transformers could overtake U-Net for medical image segmentation. We compare SegFormer, one of the most popular transformer architectures for segmentation, to U-Net using three publicl…

Implementation and evaluation of medical imaging techniques based on conformal geometric algebra

2020

Medical imaging tasks, such as segmentation, 3D modeling, and registration of medical images, involve complex geometric problems, usually solved by standard linear algebra and matrix calculations. In the last few decades, conformal geometric algebra (CGA) has emerged as a new approach to geometric computing that offers a simple and efficient representation of geometric objects and transformations. However, the practical use of CGA-based methods for big data image processing in medical imaging requires fast and efficient implementations of CGA operations to meet both real-time processing constraints and accuracy requirements. The purpose of this study is to present a novel implementation of …

Efficient contour-based annotation by iterative deep learning for organ segmentation from volumetric medical images

2022

Abstract Purpose Training deep neural networks usually require a large number of human-annotated data. For organ segmentation from volumetric medical images, human annotation is tedious and inefficient. To save human labour and to accelerate the training process, the strategy of annotation by iterative deep learning recently becomes popular in the research community. However, due to the lack of domain knowledge or efficient human-interaction tools, the current AID methods still suffer from long training time and high annotation burden. Methods We develop a contour-based annotation by iterative deep learning (AID) algorithm which uses boundary representation instead of voxel labels to incorp…

Automated approach for indirect immunofluorescence images classification based on unsupervised clustering method

2018

Autoimmune diseases (ADs) are a collection of many complex disorders of unknown aetiology resulting in immune responses to self-antigens and are thought to result from interactions between genetic and environmental factors. ADs collectively are amongst the most prevalent diseases in the U.S., affecting at least 7% of the population. The diagnosis of ADs is very complex, the standard screening methods provides seeking and recognizing of Antinuclear Antibodies (ANA) by Indirect ImmunoFluorescence (IIF) based on HEp-2 cells. In this paper an automatic system able to identify and classify the Centromere pattern is presented. The method is based on the grouping of centromeres present on the cell…

AnatomySketch : An Extensible Open-Source Software Platform for Medical Image Analysis Algorithm Development

2021

AbstractThe development of medical image analysis algorithm is a complex process including the multiple sub-steps of model training, data visualization, human–computer interaction and graphical user interface (GUI) construction. To accelerate the development process, algorithm developers need a software tool to assist with all the sub-steps so that they can focus on the core function implementation. Especially, for the development of deep learning (DL) algorithms, a software tool supporting training data annotation and GUI construction is highly desired. In this work, we constructed AnatomySketch, an extensible open-source software platform with a friendly GUI and a flexible plugin interfac…