Search results for "Methyl group"

showing 10 items of 57 documents

Intramolecular Interactions in the Triplet Excited States of Benzophenone–Thymine Dyads

2005

Time-resolved and product studies on the synthesized dyads 1 and 2 have provided evidence that the benzophenone-to-thymine orientation strongly influences intramolecular photophysical and photochemical processes. The prevailing reaction mechanism has been established as a Paterno-Büchi cycloaddition to give oxetanes 3-6; however, the ability of benzophenone to achieve a formal hydrogen abstraction from the methyl group of thymidine has also been evidenced by the formation of photoproducts 7 and 8. These processes have been observed only in the case of the cisoid dyad 1. Adiabatic photochemical cycloreversion of the oxetane ring is achieved upon direct photolysis to give the starting dyad 1 …

PhotochemistryOrganic ChemistryGeneral ChemistryOxetaneHydrogen atom abstractionPhotochemistryCatalysisCycloadditionBenzophenoneschemistry.chemical_compoundchemistryEthers CyclicExcited stateIntramolecular forceBenzophenoneTriplet stateThymineThymidineMethyl groupChemistry - A European Journal
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Spin lattice relaxation rates of tunnelling CD3 groups

1991

The spin lattice relaxation rates of deuterated methyl groups are calculated for threefold and sixfold potentials. It is shown that it should be possible to determine the symmetry of the potential hindering the methyl groups from deuteron spin lattice relaxation experiments. The temperature dependence of the spin lattice relaxation rates is discussed using a simple model. The similarities and the differences between proton NMR and deuteron NMR are pointed out. The main difference is thatEa↔Eb transitions are forbidden by spin selection rules in case of CH3, but not for CD3. Therefore, and due to the fact that the quadrupolar interaction is a single particle interaction, deuteron NMR allows …

PhysicsCondensed matter physicsParticle interactionSpin–lattice relaxationMolecular physicsSymmetry (physics)chemistry.chemical_compoundchemistryDeuteriumProton NMRCondensed Matter::Strongly Correlated ElectronsGeneral Materials ScienceQuantum tunnellingMethyl groupSpin-½Zeitschrift für Physik B Condensed Matter
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Effect of the Substituent Position on the Anionic Copolymerization of Styrene Derivatives: Experimental Results and Density Functional Theory Calcula…

2019

In a combined synthetic, kinetic and theoretical study, the living anionic copolymerization of styrene and its ring-methylated derivatives ortho-, meta-, and para-methylstyrene (MS) was examined by real-time 1H NMR spectroscopy in the nonpolar solvents toluene-d8 and cyclohexane-d12 as well as by density functional theory calculations. Based on the NMR kinetics data, reactivity ratios for each comonomer pair were determined by the Kelen–Tudős method and numerical integration of the copolymerization equation (Contour software). The reaction pathway was modeled and followed by density functional theory (DFT) calculations to validate and predict the experimentally derived reactivity ratios. Un…

Polymers and PlasticsComonomerOrganic ChemistrySubstituent02 engineering and technology010402 general chemistry021001 nanoscience & nanotechnology01 natural sciences0104 chemical sciencesStyreneInorganic Chemistrychemistry.chemical_compoundchemistryComputational chemistryMaterials ChemistryCopolymerReactivity (chemistry)Density functional theoryGradient copolymers0210 nano-technologyMethyl groupMacromolecules
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Influence of structure on the polarizability of hydrated methane sulfonic acid clusters

2015

Abstract: The relationship between polarizability and structure is investigated in methane sulfonic acid (MSA) and in 36 hydrated MSA clusters. The polarizabilities are calculated at B3LYP and MP2 level and further partitioned into molecular contributions using classic and iterative Hirshfeld methods. The differences in the two approaches for partitioning of polarizabilities are thoroughly analyzed. The polarizabilities of the molecules are found to be influenced in a systematic way by the hydrogen bond network in the clusters, proton transfer between MSA and water molecules, and weak interactions between water molecules and the methyl group of MSA.

ProtonChemistryHydrogen bondPhysicsQuantitative Biology::GenomicsComputer Science Applicationschemistry.chemical_compoundQuantitative Biology::Quantitative MethodsChemistryComputational chemistryPolarizabilityMethane sulfonic acidPhysics::Atomic and Molecular ClustersMoleculePhysics::Atomic PhysicsPhysical and Theoretical ChemistryPhysics::Chemical PhysicsMethyl groupJournal of chemical theory and computation
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ChemInform Abstract: 1,2-Methyl Shift in the Reaction of 4,7-Dihydro-4,5-dimethyl-7-phenyl-(1,2,4)-triazolo[1,5-a]pyrimidine with Tosyl Azide.

2010

The reaction of the heterocyclic enamine 1 with tosyl azide (2) leads to the tosylimino derivative 4 of 1,2,4-triazolo[1,5-a]pyrimidine. The extrusion of nitrogen from the primary adduct 3 is followed by a 1,2-shift of a methyl group. The structure determination of 4 is based on 1H and 13C nmr spectra including NOE measurements.

PyrimidineStereochemistryChemistrychemistry.chemical_elementGeneral MedicineCarbon-13 NMRNitrogenMedicinal chemistryAdductEnamineTosyl azidechemistry.chemical_compoundDerivative (chemistry)Methyl groupChemInform
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Dynamics and reactivity in Thermus aquaticus N6-adenine methyltransferase.

2014

M.TaqI is a DNA methyltransferase from Thermus aquaticus that catalyzes the transfer of a methyl group from S-adenosyl-l-methionine to the N6 position of an adenine, a process described only in prokaryotes. We have used full atomistic classical molecular dynamics simulations to explore the protein–SAM–DNA ternary complex where the target adenine is flipped out into the active site. Key protein–DNA interactions established by the target adenine in the active site are described in detail. The relaxed structure was used for a combined quantum mechanics/molecular mechanics exploration of the reaction mechanism using the string method. According to our free energy calculations the reaction takes…

Reaction mechanismSite-Specific DNA-Methyltransferase (Adenine-Specific)BioinformaticsStereochemistryProtein ConformationMolecular Dynamics SimulationBiochemistryCatalysisMolecular dynamicschemistry.chemical_compoundColloid and Surface ChemistryReaction rate constantAbstractingA-DNAThermusTernary complexThermus aquaticusbiologyActive siteGeneral ChemistryDNAbiology.organism_classificationchemistryFunctional groupsbiology.proteinAmino acidsNucleic Acid ConformationQuantum TheoryThermodynamicsMethyl groupJournal of the American Chemical Society
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Catalysis in glycine N-methyltransferase: testing the electrostatic stabilization and compression hypothesis.

2006

Glycine N-methyltransferase (GNMT) is an S-adenosyl-l-methionine dependent enzyme that catalyzes glycine transformation to sarcosine. Here, we present a hybrid quantum mechanics/molecular mechanics (QM/MM) computational study of the reaction compared to the counterpart process in water. The process takes place through an SN2 mechanism in both media with a transition state in which the transferring methyl group is placed in between the donor (SAM) and the acceptor (the amine group of glycine). Comparative analysis of structural, electrostatic, and electronic characteristics of the in-solution and enzymatic transition states allows us to get a deeper insight into the origins of the enzyme's c…

S-AdenosylmethionineSarcosinebiologyChemistryStereochemistryHydrogen bondStatic ElectricityActive siteGlycine N-MethyltransferaseBiochemistryAcceptorGlycine N-methyltransferaseTransition stateCatalysischemistry.chemical_compoundModels ChemicalGNMTbiology.proteinMethyl groupBiochemistry
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(-)-Isosteviol as a Versatile Ex-Chiral-Pool Building Block for Organic Chemistry

2013

(–)-Isosteviol is readily available in large quantities by the acidic treatment of a common alternative sweetener. The two functional groups of (–)-isosteviol are presented on the same side of the ent-beyerane scaffold with a mutual C–C distance of about 7 A. Their unique concave arrangement experiences a strong asymmetric environment due to an adjacent methyl group. Consequently, this building block has found several applications in supramolecular chemistry and organocatalysis. These areas and the chemical modification of this scaffold as well as its biological activity are surveyed.

Scaffoldchemistry.chemical_compoundchemistryOrganocatalysisOrganic ChemistrySupramolecular chemistryChemical modificationOrganic chemistryPhysical and Theoretical ChemistryBlock (periodic table)Alternative sweetenerMethyl groupEuropean Journal of Organic Chemistry
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Tuning the nuclearity of iron(iii) polynuclear clusters by using tetradentate Schiff-base ligands

2014

Three novel octanuclear, hexanuclear and tetranuclear complexes of high-spin Fe(III) ions were obtained by the reaction of the N,N′-bis-(1R-imidazol-4-ylmethylene)-ethane-1,2-diamine ligand (R = H, CH3) and its derivatives with Fe(ClO4)3·6H2O and KSCN. The tetradentate Schiff-base ligand acts as a bis(bidentate) chelating bridge between two adjacent high-spin Fe(III) centers. The presence of a methyl group in the imidazolyl substituent, the change of counterions or the replacement of imidazole by pyridine has a drastic effect on the nuclearity of the cluster. The magnetic properties of all compounds exhibit antiferromagnetic interactions via μ-oxo or μ-hydroxo pathways in Fe(III) dimers.

Schiff baseDenticityLigandInorganic chemistrySubstituentGeneral ChemistryCatalysischemistry.chemical_compoundCrystallographychemistryPyridineMaterials ChemistryImidazoleChelationMethyl groupNew J. Chem.
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A ferromagnetic methoxido-bridged Mn(III) dimer and a spin-canted metamagnetic μ(1,3)-azido-bridged chain.

2012

Two new Mn(III) complexes of formulas [MnL(1)(N(3))(OMe)](2) (1) and [MnL(2)(N(3))(2)](n) (2) have been synthesized by using two tridentate NNO-donor Schiff base ligands HL(1){(2-[(3-methylaminoethylimino)-methyl]-phenol)} and HL(2) {(2-[1-(2-dimethylaminoethylimino)methyl]phenol)}, respectively. Substitution of the H atom on the secondary amine group of the N-methyldiamine fragment of the Schiff base by a methyl group leads to a drastic structural change from a methoxido-bridged dimer (1) to a single μ(1,3)-azido-bridged 1D helical polymer (2). Both complexes were characterized by single-crystal X-ray structural analyses and variable-temperature magnetic susceptibility measurements. The ma…

Schiff baseStereochemistryDimerMagnetic susceptibilityInorganic Chemistrychemistry.chemical_compoundCrystallographyFerromagnetismchemistryAmine gas treatingPhysical and Theoretical ChemistrySpin (physics)Methyl groupSpin cantingInorganic chemistry
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