Search results for "Microbio"

showing 10 items of 8741 documents

Give me a sample of air and I will tell which species are found from your region : Molecular identification of fungi from airborne spore samples

2017

Fungi are a megadiverse group of organisms, they play major roles in ecosystem functioning and are important for human health, food production and nature conservation. Our knowledge on fungal diversity and fungal ecology is however still very limited, in part because surveying and identifying fungi is time demanding and requires expert knowledge. We present a method that allows anyone to generate a list of fungal species likely to occur in a region of interest, with minimal effort and without requiring taxonomical expertise. The method consists of using a cyclone sampler to acquire fungal spores directly from the air to an Eppendorf tube, and applying DNA barcoding with probabilistic specie…

0106 biological sciences0301 basic medicineBACTERIALBiodiversityAir MicrobiologyDIVERSITYmolecular identificationLANDSCAPE SCALE01 natural sciencesDNA barcodingCOMMUNITY COMPOSITIONekosysteemitTEMPORAL VARIABILITYmolecular biologymolekyylibiologiaFinlandtunnistaminen2. Zero hungeralue-ekologiaOUTDOOR AIREcologySampling (statistics)ReplicateBiodiversitySpores Fungalekosysteemipalvelut1181 Ecology evolutionary biologySeasonsrecognitionsienetecosystemsBiotechnologyregional ecologySample (material)SHORT DISTANCESBiologyspore010603 evolutionary biology03 medical and health sciencesSpecies SpecificityGeneticsDNA Barcoding Taxonomicfungal sampling methodEcosystemEcology Evolution Behavior and SystematicsMolecular identificationWOOD-INHABITING FUNGIFungi15. Life on landatmospheric diversityATMOSPHERESporeekosysteemit (ekologia)fungal diversity030104 developmental biologyfungal survey1182 Biochemistry cell and molecular biologyfungiDISPERSAL LIMITATIONecosystem services
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Host dispersal shapes the population structure of a tick-borne bacterial pathogen

2020

Birds are hosts for several zoonotic pathogens. Because of their high mobility, especially of longdistance migrants, birds can disperse these pathogens, affecting their distribution and phylogeography. We focused on Borrelia burgdorferi sensu lato, which includes the causative agents of Lyme borreliosis, as an example for tick-borne pathogens, to address the role of birds as propagation hosts of zoonotic agents at a large geographical scale. We collected ticks from passerine birds in 11 European countries. B. burgdorferi s.l. prevalence in Ixodes spp. was 37% and increased with latitude. The fieldfare Turdus pilaris and the blackbird T. merula carried ticks with the highest Borrelia prevale…

0106 biological sciences0301 basic medicineBORRELIA-BURGDORFERIACARImedicine.disease_causemigrationBURGDORFERI SENSU-LATO01 natural sciencesSongbirdsLyme diseaseTicksAcariMigration11832 Microbiology and virologyLyme DiseasebiologyPlan_S-Compliant_NOBLACKBIRDS TURDUS-MERULAPREVALENCEEuropehost-parasite interactionsMIGRATORY BIRDSinternational1181 Ecology evolutionary biology[SDE]Environmental SciencesHost-paraste InterationsHost-parasite interactionsAvesTRANSMISSIONZoology010603 evolutionary biologyticksBirds03 medical and health sciencesBorreliaparasitic diseasesGeneticsmedicineAnimalsHumansBorrelia burgdorferiEcology Evolution Behavior and SystematicsLyme borreliosisInfecções Sistémicas e ZoonosesIxodesBird DiseasesBorreliaLYME-DISEASEIXODES-RICINUS TICKSBorrelia gariniiEcologíabiology.organism_classificationmedicine.diseasebacterial infections and mycoses030104 developmental biologybirdsCandidatusWILD BIRDSMultilocus sequence typingBorrelia gariniiIxodesMultilocus Sequence Typing
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Clonal populations of Clavibacter michiganensis subsp michiganensis are responsible for the outbreaks of bacterial canker in greenhouse tomatoes in I…

2015

Clavibacter michiganensis subsp. michiganensis (Cmm) strains, collected in greenhouses from 17 farms during tomato bacterial canker outbreaks occurring between 2005 and 2008 in Sicily, were analysed by a multiphasic approach. Population studies were conducted to investigate the possible sources of inocula. Cmm strains were characterized by PCR assays targeting virulence genes, fingerprinting techniques, metabolic profiles and virulence. These strains were comparatively analysed with Cmm strains isolated in other parts of Italy over a period of 15 years. Chromosomal genes encoding virulence determinants tomA, ppaA, chpC, and the plasmid-encoded genes pat-1 and celA were detected by PCR in al…

0106 biological sciences0301 basic medicineBacterial cankerBOX-PCR; Clavibacter michiganensis subsp; michiganensis; fAFLP; polyphasic characterization; tomato bacterial wilt and cankerClavibacter michiganensis subsp030106 microbiologyPopulationVirulencePlant ScienceHorticultureBiologySubspeciesfAFLP01 natural sciencesPolyphasic characterizationMicrobiologyClavibacter michiganensis subsp. michiganensi03 medical and health sciencesmichiganensisGeneticseducationGeneBOX-PCReducation.field_of_studyHaplotypeOutbreakSettore AGR/12 - Patologia VegetaleTomato bacterial wilt and cankerbiology.organism_classificationAgronomy and Crop ScienceClavibacter michiganensis010606 plant biology & botany
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Novel biocatalysts for glycerol conversion into 2,3-butanediol

2016

Abstract Bioconversion of biodiesel-derived waste glycerol into high-value products is proposed as a solution to improve economic viability of biorefineries. Several microorganisms are able to metabolize glycerol into 2,3-butanediol (2,3-BD), a promising bulk chemical with wide applications: solvent, fuel additive, and feedstock for synthetic rubber production, among them. In the present work, a wide screening of microorganisms present both into the waste water treatment system in a biodiesel industry and in culture collections was carried out in order to evaluate their potential as new 2,3-BD producer biocatalysts. Two microorganisms for 2,3-BD production from glycerol as sole carbon sourc…

0106 biological sciences0301 basic medicineBiodieselbiologyBioconversionBioengineeringRaoultella terrigenaPulp and paper industrybiology.organism_classification01 natural sciencesApplied Microbiology and BiotechnologyBiochemistryRaoultella planticola03 medical and health scienceschemistry.chemical_compound030104 developmental biologyRaoultellachemistryBiochemistry010608 biotechnology23-ButanediolGlycerolYeast extractProcess Biochemistry
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Anhydrobiosis in yeasts: Glutathione synthesis by yeast Ogataea (Hansenula) polymorpha cells after their dehydration-rehydration.

2019

The possibility of using active dry microbial preparations in biotechnological processes is essential for the development of new modern industrial technologies. In this study, we show the possibility of obtaining such preparations of the genetically engineered yeast strain Ogataea (Hansenula) polymorpha with glutathione overproduction. Special pre-treatment involving the gradual rehydration of dry cells in water vapour led to the restoration/reactivation of almost 100% of dehydrated cells. Furthermore, dry cells do not lose their viability during storage at room temperatures. Application of dry cells as the inoculum provides the same levels of glutathione synthesis as that of a native yeast…

0106 biological sciences0301 basic medicineBioengineeringGlutathione synthesis01 natural sciencesApplied Microbiology and BiotechnologyGlutathione Synthase03 medical and health scienceschemistry.chemical_compound010608 biotechnologymedicineDehydrationDesiccationOverproductionCryptobiosisMicrobial ViabilityChemistryGeneral MedicineGlutathionemedicine.diseaseGlutathioneYeast030104 developmental biologyDehydration rehydrationBasic-Leucine Zipper Transcription FactorsBiochemistrySaccharomycetalesFluid TherapyGenetic EngineeringHansenula polymorphaBiotechnologyJournal of biotechnology
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Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae

2020

9 pages, 1 figure, 3 tables

0106 biological sciences0301 basic medicineBiology010603 evolutionary biology01 natural sciencesMicrobiology03 medical and health sciencesSaccharophagus degradansGammaproteobacteriaMagnesium ionGenome sizeEcology Evolution Behavior and SystematicsStrain (chemistry)Marine bacteriaAgarilyticaGeneral MedicineAA16S ribosomal RNAbiology.organism_classificationHalophileThalassocella030104 developmental biologyBiochemistryCellvibrionaceaeANITeredinibacterEnergy sourceInternational Journal of Systematic and Evolutionary Microbiology
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Specific binding of Bacillus thuringiensis Cry1Ea toxin, and Cry1Ac and Cry1Fa competition analyses in Anticarsia gemmatalis and Chrysodeixis include…

2019

AbstractAnticarsia gemmatalis (velvetbean caterpillar) and Chrysodeixis includens (soybean looper) are two important defoliation pests of soybeans. In the present study, we have investigated the susceptibility and brush border membrane-binding properties of both species to Bacillus thuringiensis Cry1Ea toxin. Bioassays performed in first-instar larvae demonstrated potent activity against both soybean pests in terms of mortality or practical mortality. Competition-binding studies carried out with 125Iodine-labelled Cry1Ea, demonstrated the presence of specific binding sites on the midgut brush border membrane vesicles (BBMV) of both insect species. Heterologous competition-binding experiment…

0106 biological sciences0301 basic medicineBrush borderlcsh:MedicineMoths01 natural sciencesArticleMicrobiologyApplied microbiology03 medical and health sciencesHemolysin ProteinsBacterial ProteinsChrysodeixis includensBacillus thuringiensisEnvironmental biotechnologyAnimalsCaterpillarlcsh:ScienceMultidisciplinaryBinding SitesbiologyBacillus thuringiensis ToxinsMicrovillifungilcsh:Rfood and beveragesMidgutbiology.organism_classificationEndotoxins010602 entomologyAnticarsia gemmatalis030104 developmental biologyCry1AcBiological Control AgentsLarvaBiological Assaylcsh:QPEST analysisSoybeansScientific Reports
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Ultraviolet radiation accelerates photodegradation under controlled conditions but slows the decomposition of senescent leaves from forest stands in …

2019

Depending on the environment, sunlight can positively or negatively affect litter decomposition, through the ensemble of direct and indirect processes constituting photodegradation. Which of these processes predominate depends on the ecosystem studied and on the spectral composition of sunlight received. To examine the relevance of photodegradation for litter decomposition in forest understoreys, we filtered ultraviolet radiation (UV) and blue light from leaves of Fagus sylvatica and Bettda pendula at two different stages of senescence in both a controlled-environment experiment and outdoors in four different forest stands (Picea abies, Pagus sylvatica, Acer platanoides, Betula pendula). Co…

0106 biological sciences0301 basic medicineCanopyUltraviolet RaysPhysiologyUV-B RADIATIONPlant ScienceForestsANTHOCYANINS01 natural sciencesUV radiationBOREAL FOREST03 medical and health scienceschemistry.chemical_compoundFagus sylvaticaPhotodegradationGeneticsPhotodegradationEcosystemFinlandComputingMilieux_MISCELLANEOUS11832 Microbiology and virologyFlavonoidsSunlight[SDV.EE]Life Sciences [q-bio]/Ecology environment4112 ForestryPhotolysisbiologyChemistryTEMPERATEPLANT LITTERPicea abies15. Life on landPlant litterbiology.organism_classificationPhenolic compoundsUnderstorey light environmentSODANKYLAPlant LeavesHorticultureLIGHT030104 developmental biology13. Climate actionBetula pendulaChlorophyllPATTERNS1182 Biochemistry cell and molecular biologyLEAF-LITTER DECOMPOSITION010606 plant biology & botany
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What is Vipp1 good for?

2018

While Vipp1 (also known as IM30) clearly is essential for proper biogenesis of thylakoid membranes in chloroplasts and cyanobacteria, the exact function of Vipp1/IM30 still remains unclear. The recent in vivo study of Gutu et al. now demonstrates that Vipp1/IM30 forms localized puncta specifically at highly curved membrane regions at the cell periphery. These Vipp1/IM30 puncta were found being highly dynamic under normal growth conditions, while it has recently been shown that they stably associate with membranes under high-light conditions. These observations, together with the observation that other Vipp1/IM30 homologous proteins also form puncta under stress conditions, indicate a protec…

0106 biological sciences0301 basic medicineCellBiologyPhotosynthesis01 natural sciencesMicrobiologyChloroplast03 medical and health sciences030104 developmental biologyMembranemedicine.anatomical_structureMembrane proteinThylakoidmedicineBiophysicsMolecular BiologyBiogenesis010606 plant biology & botanyPhotosystemMolecular Microbiology
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Cnidarian Interaction with Microbial Communities: From Aid to Animal’s Health to Rejection Responses

2018

The phylum Cnidaria is an ancient branch in the tree of metazoans. Several species exert a remarkable longevity, suggesting the existence of a developed and consistent defense mechanism of the innate immunity capable to overcome the potential repeated exposure to microbial pathogenic agents. Increasing evidence indicates that the innate immune system in Cnidarians is not only involved in the disruption of harmful microorganisms, but also is crucial in structuring tissue-associated microbial communities that are essential components of the Cnidarian holobiont and useful to the animal’s health for several functions, including metabolism, immune defense, development, and behavior. Someti…

0106 biological sciences0301 basic medicineCnidariaMicrobial communitiemedia_common.quotation_subjectPharmaceutical Sciencemicrobial communitieszooxanthellaeReview01 natural sciences03 medical and health sciencesCnidariaantibacterial activityPhylogeneticsImmunityAnthozoaDrug DiscoveryHomeostasiAnimalsHomeostasisSymbiosiscnidarianPharmacology Toxicology and Pharmaceutics (miscellaneous)lcsh:QH301-705.5Phylogenymedia_commonInnate immune systemMucous MembranebiologyMechanism (biology)Animal010604 marine biology & hydrobiologyDrug Discovery3003 Pharmaceutical ScienceMicrobiotaLongevitybleachingcnidarian holobiontbiology.organism_classificationImmunity InnateHolobiont030104 developmental biologylcsh:Biology (General)Evolutionary biologyanthozoaSymbiosiBiotechnologyMarine Drugs
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