Search results for "Microcosm"
showing 10 items of 102 documents
Bacteriophage richness reduces bacterial niche overlap in experimental microcosms
2015
Antagonistic interactions such as competition and predation shape the structure and dynamics of ecological communities. Their combined effects can affect the species richness within a particular trophic level. Despite theory linking the complementarity of interactions across trophic levels and ecosystem functioning, there is a shortage of empirical tests of such predictions. We present an experimental investigation of these combined effects within a bacteria-phage interaction network. We measured the biomass yield of combinations of bacterial strains under increasing levels of bacteriophage richness. Our results show an increasing impact of phage on bacteria with increasing phage diversity.…
Shifts in size, genetic structure and activity of the soil denitrifier community by nematode grazing
2010
International audience; Bacterial-feeding nematodes represent an important driver of the soil microbial activity and diversity. This study aimed at characterizing the impact of nematode grazing on a model functional bacterial guild involved in N-cycling, the denitrifiers. Bacterial-feeding nematodes (Cephalobus pseudoparvus) were inoculated into soil microcosms whose indigenous nematofauna had previously been removed. The size, genetic structure and activity of the soil denitrifier community were characterized 15 and 45 days after nematodes inoculation using quantitative PCR of the nirK, nirS and nosZ denitrification genes, fingerprinting of the nirK and nirS genes and denitrification enzym…
Bacteria and microbial-feeders modify the performance of a decomposer fungus
2001
Abstract We studied whether the presence of a bacterium can affect the functioning or stability of simple fungal-based decomposer food chains. We constructed microcosms with 60 g washed mineral soil and four different food webs: (1) a fungus (Cladosporium herbarum) alone; (2) a fungus and a fungal-feeding nematode (Aphelenchoides sp.); (3) a fungus and a bacterium (Escherichia coli); and (4) a fungus, a bacterium, a fungal- and a bacterial-feeding nematode (Aphelenchoides sp. and Acrobeloides tricornus). Glucose was supplied as the sole carbon source. One replicate set of microcosms was kept at −2°C for the sixth and seventh week as an experimental disturbance. The microcosms were destructi…
Top-down effects of a lytic bacteriophage and protozoa on bacteria in aqueous and biofilm phases
2014
Lytic bacteriophages and protozoan predators are the major causes of bacterial mortality in natural microbial communities, which also makes them potential candidates for biological control of bacterial pathogens. However, little is known about the relative impact of bacteriophages and protozoa on the dynamics of bacterial biomass in aqueous and biofilm phases. Here, we studied the temporal and spatial dynamics of bacterial biomass in a microcosm experiment where opportunistic pathogenic bacteria Serratia marcescens was exposed to particle‐feeding ciliates, surface‐feeding amoebas, and lytic bacteriophages for 8 weeks, ca. 1300 generations. We found that ciliates were the most efficient enem…
Relationship between soil microarthropod species diversity and plant growth does not change when the system is disturbed
2002
Soil microarthropods influence vital ecosystem processes, such as decomposition and nutrient mineralisation. There is evidence, however, that proper functioning of ecosystems does not require the presence of all its constituent species, and therefore some species can be regarded as functionally redundant. It has been proposed that species redundancy can act as an insurance against unfavourable conditions, and that functionally redundant species may become important when a system has faced a disturbance (the “insurance hypothesis”). We conducted a laboratory microcosm experiment with coniferous forest soil and a seedling of silver birch (Betula pendula). A gradient of microarthropod diversit…
Plant effects on the soil community: A microcosm experiment
1999
Abstract An experiment was carried out in microcosms for testing the hypothesis that a higher level of primary production should maintain a decomposer community with higher biomass and activity. Microcosms with coniferous forest humus and a diverse microbial and faunal community were divided into three sets: (1) control without plants, (2) with birch seedlings in full illumination, and (3) with birch seedlings, shaded to reduce the net primary production. During 16 weeks of incubation at +16 °C, no treatment effects were found in numbers or biomass of taxonomic or functional groups of soil organisms, nor in the system respiration in darkness. The community structure of the shaded systems di…
Influence of carbon and nutrient additions on a decomposer food chain and the growth of pine seedlings in microcosms
2001
Abstract Because of N deposition plant production is becoming increasingly limited by other nutrients in boreal forests. At the same time more C is suggested to become available for below-ground food webs because of enhanced CO2 fixation. We studied the effects of carbon and nutrient addition on a fungus–nematode food chain and on the growth of mycorrhizal or nonmycorrhizal pine seedlings (Pinus sylvestris L.) in microcosms with N-rich mineral soil and a humus layer. The role of the food chain and mycorrhizal fungi for pine growth was tested in a smaller set-up. The total pine biomass was not N-limited at the scale of two experimental growing seasons. In accordance with established knowledg…
Population- and ecosystem-level effects of predation on microbial-feeding nematodes.
2017
We studied the role of nematode predation in the functioning of detrital food webs assembled in microcosms. The microcosms contained defaunated humus and litter materials, a diverse microbial community with bacteria, fungi and protozoa, and a birch (Betula pendula) seedling infected with mycorrhizal fungi. Different levels of top-down control upon microbivorous nematodes were set up by assembling food webs either without predators, or in combinations with a specialist and a non-specialist predatory mite (Mesostigmata). The nematode community was composed of either (1) three species of bacterivorous, or (2) three species of fungivorous nematodes or (3) both groups together. After two growing…
Diuron environmental levels effects on marine nematodes: Assessment of ecological indices, taxonomic diversity, and functional traits
2021
Abstract Coastal marine systems are the most sensitive zones to emerging pollutants. The present study aims to investigate the effect of Diuron on the meiofaunal assemblages, collected from the Bizerte channel (Tunisia). Microcosm experiments were set up using four increasing Diuron concentrations [D1 (10 ng g−1 dry weight (DW)), D2 (50 ng g−1 DW), D3 (250 ng g−1 DW) and (1250 ng g−1 DW)] compared to non-contaminated sediments (controls) and all plots were incubated for 30 days. Our results show that Diuron-supplemented sediments provoked the significant decrease of meiofaunal abundance as well as a change in nematodes' diversity and structure composition. All univariate indices, as well as…
Effect of carbon source supply and its location on competition between inoculated and established bacterial strains in sterile soil microcosm
1999
The aim of this work was to study how the location of a carbon source and of bacterial cells in soil can enhance the growth of a bacterial inoculum. Studies were performed using irradiated soil and two pairs of strains of Bradyrhizobium japonicum and Pseudomonas fluorescens. For each species, an antibiotic-resistant mutant was used as inoculant and introduced into a sterile soil pre-colonised with its parent strain. The inocula and a glycerol amendment were introduced together or separately into soil using porous microgranules or by spraying a suspension onto the bulk soil. Competition was assessed by plate counts of both inoculant and established populations. Both B. japonicum and P. fluor…