Search results for "Modeling"
showing 10 items of 4489 documents
A note on the higher order strain and stress tensors within deformation gradient elasticity theories: Physical interpretations and comparisons
2016
Abstract Higher order strain and stress tensors encompassed within gradient elasticity theories are discussed with a particular concern to the physical meaning of double and triple stresses. A single rule is shown to hold for the physical interpretation of the indices of a higher order stress tensor both within distortion gradient and strain gradient theories, whereas the analogous Mindlin’s rule holds only within distortion gradient theories. Double and triple stresses are discussed separately with the aid of simple illustrative examples. A corrigendum to a previous paper by the author (IJSS 50 (2013) 3749–3765) is also presented.
A shallow water model with eddy viscosity for basins with varying bottom topography
2001
The motion of an incompressible fluid confined to a shallow basin with a varying bottom topography is considered. We introduce appropriate scalings into a three-dimensional anisotropic eddy viscosity model to derive a two-dimensional shallow water model. The global regularity of the resulting model is proved. The anisotropic form of the stress tensor in our three-dimensional eddy viscosity model plays a critical role in ensuring that the resulting shallow water model dissipates energy.
Chromatin Domains and Regulation of Transcription
2007
Compartmentalization and compaction of DNA in the nucleus is the characteristic feature of eukaryotic cells. A fully extended DNA molecule has to be compacted 100,000 times to fit within the nucleus. At the same time it is critical that various DNA regions remain accessible for interaction with regulatory factors and transcription/replication factories. This puzzle is solved at the level of DNA packaging in chromatin that occurs in several steps: rolling of DNA onto nucleosomes, compaction of nucleosome fiber with formation of the so-called 30 nm fiber, and folding of the latter into the giant (50-200 kbp) loops, fixed onto the protein skeleton, the nuclear matrix. The general assumption is…
Kinetic models for nucleocytoplasmic transport of messenger RNA
1995
Abstract Much is known about the mechanism by which mRNAs cross the nuclear envelope (the translocation stage of nucleocytoplasmic transport), but far less is known about the preceding (intranuclear migration/release) and succeeding (cytoplasmic binding) stages. Therefore, existing information suffices for articulating detailed kinetic models of translocation, but not models for the overall mRNA transport process. In this paper, we show that simple kinetic models of translocation can (i) accommodate date about nucleocytoplasmic distributions of endogenous transcripts; (ii) predict the overall effects on these distributions of effectors such as insulin and epidermal growth factor; (iii) thro…
(H, ρ)-induced dynamics and the quantum game of life
2017
Abstract We propose an extended version of quantum dynamics for a certain system S , whose evolution is ruled by a Hamiltonian H, its initial conditions, and a suitable set ρ of rules, acting repeatedly on S . The resulting dynamics is not necessarily periodic or quasi-periodic, as one could imagine for conservative systems with a finite number of degrees of freedom. In fact, it may have quite different behaviors depending on the explicit forms of H, ρ as well as on the initial conditions. After a general discussion on this (H, ρ)-induced dynamics, we apply our general ideas to extend the classical game of life, and we analyze several aspects of this extension.
Social Simulation Based on Cellular Automata: Modeling Language Shifts
2011
Nowadays, language shifts (i.e., a community of speakers stops using their traditional language and speaks a new one in all communication settings) may produce a massive extinction of languages throughout the world. In this context, an important task for social sciences research should therefore be to achieve a deep comprehension of language shifts. However, modeling the social and behavioral variables that guide the social behavior of individuals and groups has traditionally been tricky in all the social sciences. In this situation, social simulation provides a tool for testing hypotheses and building models of social phenomena (see, for example, Gilbert, 1996; Gilbert & Toitzsch, 2005; an…
An essential switch in subunit composition of a chromatin remodeling complex during neural development.
2007
Summary Mammalian neural stem cells (NSCs) have the capacity to both self-renew and to generate all the neuronal and glial cell-types of the adult nervous system. Global chromatin changes accompany the transition from proliferating NSCs to committed neuronal lineages, but the mechanisms involved have been unclear. Using a proteomics approach, we show that a switch in subunit composition of neural, ATP-dependent SWI/SNF-like chromatin remodeling complexes accompanies this developmental transition. Proliferating neural stem and progenitor cells express complexes in which BAF45a, a Kruppel/PHD domain protein and the actin-related protein BAF53a are quantitatively associated with the SWI2/SNF2-…
Is sustainable transportation limited by urban form? An international GIS-based approach
2019
International audience
Caveolin and GLT-1 gene expression is reciprocally regulated in primary astrocytes: Association of GLT-1 with non-caveolar lipid rafts
2004
Caveolae represent membrane microdomains acting as integrators of cellular signaling and functional processes. Caveolins are involved in the biogenesis of caveolae and regulate the activity of caveolae-associated proteins. Although caveolin proteins are found in the CNS, the regulation of caveolins in neural cells is poorly described. In the present study, we investigated different modes and mechanisms of caveolin gene regulation in primary rat astrocytes. We demonstrated that activation of cAMP-dependent signaling pathways led to a marked reduction in protein levels of caveolin-1/-2 in cortical astrocytes. Application of transforming growth factor-alpha (TGF-alpha) also resulted in a decre…
On the Performance of Channel Assembling and Fragmentation in Cognitive Radio Networks
2014
[EN] Flexible channel allocation may be applied to multi-channel cognitive radio networks (CRNs) through either channel assembling (CA) or channel fragmentation (CF). While CA allows one secondary user (SU) occupy multiple channels when primary users (PUs) are absent, CF provides finer granularity for channel occupancy by allocating a portion of one channel to an SU flow. In this paper, we investigate the impact of CF together with CA for SU flows by proposing a channel access strategy which activates both CF and CA and correspondingly evaluating its performance. In addition, we also consider a novel scenario where CA is enabled for PU flows. The performance evaluation is conducted based on…