Search results for "Molecular"

showing 10 items of 32340 documents

Disentangling higher trophic level interactions in the cabbage aphid food web using high-throughput DNA sequencing

2017

International audience; The lack of understanding of complex food-web interactions has been a major gap in the history of biological control. In particular, a better understanding of the functioning of pest food-webs and how they vary between native and invaded geographical ranges is of prime interest for biological control research and associated integrated pest management. Technical limitations associated with the deciphering of complex food-webs can now be largely overcome by the use of high throughput DNA sequencing techniques such as Illumina MiSeq. We tested the efficiency of this next generation sequencing technology in a metabarcoding approach, to study aphid food-webs using the cab…

0106 biological sciences0301 basic medicineIntegrated pest managementhyperparasitoidsRange (biology)media_common.quotation_subjectBiological pest controlbiological controlmetabarcoding biological control enemy release hypothesis hyperparasitism parasitoids hyperparasitoids competition010603 evolutionary biology01 natural sciencesCompetition (biology)DNA sequencingenemy release hypothesis03 medical and health sciencesGeneticsLaboratory of EntomologyMolecular BiologyQH540-549.5Nature and Landscape Conservationmedia_commonTrophic levelEnemy release hypothesisHyperparasitismHyperparasitoidsAphidCompetitionParasitoidsEcologybiologyEcologyLaboratorium voor Entomologiebiology.organism_classificationparasitoids[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal genetics030104 developmental biologySettore AGR/11 - Entomologia Generale E ApplicataBiological controlenemy releasmetabarcodingMetabarcodingAnimal Science and ZoologyPEST analysisEPShyperparasitismcompetition
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2017

Males compete over mating and fertilization, and often harm females in the process. Inclusive fitness theory predicts that increasing relatedness within groups of males may relax competition and discourage male harm of females as males gain indirect benefits. Recent studies in Drosophila melanogaster are consistent with these predictions, and have found that within-group male relatedness increases female fitness, though others have found no effects. Importantly, these studies did not fully disentangle male genetic relatedness from larval familiarity, so the extent to which modulation of harm to females is explained by male familiarity remains unclear. Here we performed a fully factorial de…

0106 biological sciences0301 basic medicineKin recognitionmedia_common.quotation_subjectKin selectionBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyCourtshipSexual conflict03 medical and health sciencesmedicineGeneral Environmental Sciencemedia_commonGeneral Immunology and MicrobiologyReproductive successAggressionInclusive fitnessGeneral Medicine030104 developmental biologySexual selectionmedicine.symptomGeneral Agricultural and Biological SciencesSocial psychologyDemographyProceedings of the Royal Society B: Biological Sciences
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Daphnia invest in sexual reproduction when its relative costs are reduced

2018

The timing of sex in facultatively sexual organisms is critical to fitness, due to the differing demographic consequences of sexual versus asexual reproduction. In addition to the costs of sex itself, an association of sex with the production of dormant life stages also influences the optimal use of sex, especially in environments where resting eggs are essential to survive unfavourable conditions. Here we document population dynamics and the occurrence of sexual reproduction in natural populations of Daphnia magna across their growing season. The frequency of sexually reproducing females and males increased with population density and with decreasing asexual clutch sizes. The frequency of…

0106 biological sciences0301 basic medicineLIFE-HISTORYsexual reproductioncost of sexAsexual reproductionCYCLICAL PARTHENOGENS01 natural sciencesDaphniaPopulation density2300 General Environmental Sciencetiming of sexLOCAL ADAPTATION2400 General Immunology and Microbiologypopulation dynamicsGeneral Environmental Scienceeducation.field_of_studybiologyINDUCTIONMIXED-EFFECTS MODELSGeneral MedicineCladocera1181 Ecology evolutionary biology590 Animals (Zoology)General Agricultural and Biological SciencesEvolutionPopulationDaphnia magna1100 General Agricultural and Biological SciencesPULEX010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences10127 Institute of Evolutionary Biology and Environmental Studies1300 General Biochemistry Genetics and Molecular BiologyPopulation growtheducationpopulation densityLocal adaptationROTIFERSGeneral Immunology and Microbiologysuvullinen lisääntyminenreproduction (biology)biology.organism_classificationlisääntyminenpopulaatiodynamiikkaSexual reproduction030104 developmental biologyDaphniaMAGNADENSITYvesikirputta1181570 Life sciences; biologyDemography
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Fitness costs of worker specialization for ant societies

2016

Division of labour is of fundamental importance for the success of societies, yet little is known about how individual specialization affects the fitness of the group as a whole. While specialized workers may be more efficient in the tasks they perform than generalists, they may also lack the flexibility to respond to rapid shifts in task needs. Such rigidity could impose fitness costs when societies face dynamic and unpredictable events, such as an attack by socially parasitic slavemakers. Here, we experimentally assess the colony-level fitness consequences of behavioural specialization in Temnothorax longispinosus ants that are attacked by the slavemaker ant T. americanus . We manipulate…

0106 biological sciences0301 basic medicineLabour economicsPopulation DynamicsHierarchy SocialBiologyGeneralist and specialist species010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite Interactions03 medical and health sciencesAnimalsSocial BehaviorSocial organizationResearch ArticlesGeneral Environmental ScienceBehavior AnimalGeneral Immunology and MicrobiologyAntsReproductionGeneral MedicineTemnothorax longispinosus030104 developmental biologyGeneral Agricultural and Biological SciencesSocial psychologyDivision of labourLower degreeProceedings of the Royal Society B: Biological Sciences
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Dynamics of Monoterpene Formation in Spike Lavender Plants

2017

The metabolic cross-talk between the mevalonate (MVA) and the methylerythritol phosphate (MEP) pathways was analyzed in spike lavender (Lavandula latifolia Med) on the basis of 13CO2-labelling experiments using wildtype and transgenic plants overexpressing the 3-hydroxy-3-methylglutaryl CoA reductase (HMGR), the first and key enzyme of the MVA pathway. The plants were labelled in the presence of 13CO2 in a gas chamber for controlled pulse and chase periods of time. GC/MS and NMR analysis of 1,8-cineole and camphor, the major monoterpenes present in their essential oil, indicated that the C5-precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) of both monoterpenes …

0106 biological sciences0301 basic medicineLavenderEndocrinology Diabetes and MetabolismMonoterpeneLavandula latifolialcsh:QR1-502Reductase01 natural sciencesBiochemistryArticlelcsh:Microbiologylaw.inventionessential oils; isotopologue profiling; lamiaceae; <i>Lavandula latifolia</i>; spike lavender; terpenoid biosynthesis; mevalonate; CO<sub>2</sub>terpenoid biosynthesislamiaceae03 medical and health sciencesCamphorchemistry.chemical_compoundmevalonatelawMolecular Biologyessential oilsEssential oilchemistry.chemical_classificationbiologyChemistrybiology.organism_classificationddc:spike lavender030104 developmental biologyEnzymeisotopologue profilingBiochemistryLamiaceaeCO2Lavandula latifolia010606 plant biology & botanyMetabolites
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The long journey of Orthotrichum shevockii (Orthotrichaceae, Bryopsida): From California to Macaronesia

2019

Biogeography, systematics and taxonomy are complementary scientific disciplines. To understand a species' origin, migration routes, distribution and evolutionary history, it is first necessary to establish its taxonomic boundaries. Here, we use an integrative approach that takes advantage of complementary disciplines to resolve an intriguing scientific question. Populations of an unknown moss found in the Canary Islands (Tenerife Island) resembled two different Californian endemic species: Orthotrichum shevockii and O. kellmanii. To determine whether this moss belongs to either of these species and, if so, to explain its presence on this distant oceanic island, we combined the evaluation of…

0106 biological sciences0301 basic medicineLeavesPlant ScienceBryology01 natural sciencesGeographical locationsCaliforniaNonvascular PlantsPhylogenyData ManagementMultidisciplinaryPhylogenetic analysisbiologyPlant AnatomyQREukaryotaPhylogenetic AnalysisPlantsClassification3. Good healthPhylogeneticsPhylogeographyGeographyMedicineTaxonomy (biology)Research ArticleSystematicsComputer and Information SciencesScienceBiogeographyCanary Islands010603 evolutionary biologyEvolution Molecular03 medical and health sciencesOrthotrichumMossesEvolutionary SystematicsNonvascular plantsOrthotrichaceaeEndemismTaxonomyEvolutionary BiologyBotánicaOrganismsBiology and Life SciencesSequence Analysis DNA15. Life on landbiology.organism_classificationBryopsidaUnited States030104 developmental biologyTaxonSpainEvolutionary biologyAfricaNorth AmericaBiological dispersalPeople and places
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Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

0106 biological sciences0301 basic medicineLife Sciences & Biomedicine - Other TopicsDYNAMICSComputer scienceDatasets as TopicReuse01 natural sciencesFOSSILSthree-dimensional modelsNaturvetenskapData CurationGeneral Environmental ScienceEcologypalaeontology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]70General Medicine11 Medical And Health SciencesCCbiomechanics Keywords: digital dataOpen dataPerspectiveComputer data storage[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesNatural SciencesLife Sciences & BiomedicineDatasets as Topic1001TISSUESphenotypeBest practiceDigital dataLibrary science25Environmental Sciences & Ecology010603 evolutionary biologyBiological Science DisciplinesGeneral Biochemistry Genetics and Molecular BiologyQA76functional analysisSet (abstract data type)03 medical and health sciencesPALEONTOLOGYBiologySubject Category: Morphology and biomechanics Subject Areas: evolutionvisualizationdigital dataEvolutionary BiologyScience & TechnologyTOMOGRAPHIC MICROSCOPYMorphology and BiomechanicsGeneral Immunology and Microbiologybusiness.industryResearchQHReproducibility of Resultscomputed tomographyPERFORMANCE06 Biological Sciences144Data scienceEVOLUTIONVisualization030104 developmental biologyVISUALIZATION07 Agricultural And Veterinary SciencesbusinessProceedings of the Royal Society B: Biological Sciences
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Jumping on the Edge—First Evidence for a 2 × 6-meric Hemocyanin in Springtails

2019

Hemocyanins are respiratory dioxygen carrier proteins found in many arthropods including ancient terrestrial species such as spiders and scorpions as well as marine horseshoe crabs. As hemocyanins are highly conserved in this lineage, it is possible to observe an evolutionary descent through its subunits and their overall structure. Unfortunately, little is known about the structure and function of hexapod hemocyanins. Using recent springtail taxa (Collembola) as models for basal hexapods, and the help of electron microscopy, light scattering, SDS PAGE, and Western blot, we could demonstrate for the first time the presence of 2 × 6-meric hemocyanins in the hemolymph of hexapods. The quatern…

0106 biological sciences0301 basic medicineLineage (evolution)medicine.medical_treatmentlcsh:QR1-502Zoologychemical and pharmacologic phenomenaSpringtail010603 evolutionary biology01 natural sciencesBiochemistrycomplex mixtureslcsh:MicrobiologyArthropod Proteins03 medical and health sciencesCrustaceaHemolymphmedicineterrestrializationAnimalsProtein Structure QuaternaryMolecular BiologyArthropodsbiologyspringtailsCommunicationHemocyaninbiology.organism_classificationhexapodsCrustaceanHorseshoe crabRespiratory protein030104 developmental biologyHemocyaninsCollembolaProtein quaternary structurehemocyaninProtein MultimerizationBiomolecules
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Founder effects drive the genetic structure of passively dispersed aquatic invertebrates

2018

Populations of passively dispersed organisms in continental aquatic habitats typically show high levels of neutral genetic differentiation, despite their high dispersal capabilities. Several evolutionary factors, including founder events and local adaptation, and life cycle features such as high population growth rates and the presence of propagule banks, have been proposed to be responsible for this paradox. Here, we have modeled the colonization process in these organisms to assess the impact of migration rate, growth rate, population size, local adaptation and life-cycle features on their population genetic structure. Our simulation results show that the strongest effect on population st…

0106 biological sciences0301 basic medicineLocal adaptationPopulationRotiferalcsh:MedicineBiologyFreshwater BiologyGenetic differentiation010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyZooplankton03 medical and health sciencesGeneticsPopulation growthAdaptació (Biologia)educationMigrationLocal adaptationeducation.field_of_studyEcologyEcologyGeneral NeurosciencePopulation sizelcsh:RSmall population sizeGeneral MedicineCladoceraEvolutionary StudiesGenetic hitchhiking030104 developmental biologyEvolutionary biologyGenetic structureBiological dispersalGeneral Agricultural and Biological SciencesInvertebrats d'aigua dolçaGenèticaPeerJ
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Changes in lipid and carotenoid metabolism in Chlamydomonas reinhardtii during induction of CO2-concentrating mechanism: Cellular response to low CO2…

2020

Photosynthetic organisms strictly depend on CO2 availability and the CO2:O2 ratio, as both CO2/O2 compete for catalytic site of Rubisco. Green alga Chlamydomonas reinhardtii, can overcome CO2 shortage by inducing CO2-concentrating mechanism (CCM). Cells transferred to low-CO2 are subjected to light-driven oxidative stress due to decrease in the electron sink. Response to environmental perturbations is mediated to some extent by changes in the lipid and carotenoid metabolism. We thus hypothesize that when cells are challenged with changes in CO2 availability, changes in the lipidome and carotenoids profile occur. These changes expected to be transient, when CCM is activated, CO2 limitation w…

0106 biological sciences0301 basic medicineLow-CO stressChlamydomonas reinhardtiimedicine.disease_cause01 natural sciences03 medical and health sciencesCarotenogenesisLipid dropletmedicineBetaine lipidsCarotenoidchemistry.chemical_classificationCCMbiologyRuBisCOChlamydomonasBiochemistry and Molecular BiologyLipid metabolismLipidomebiology.organism_classificationLipid droplets030104 developmental biologyMicrobiology (Microbiology in the medical area to be 30109)chemistryBiochemistryXanthophyllbiology.proteinAgronomy and Crop ScienceOxidative stressBiokemi och molekylärbiologi010606 plant biology & botany
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