Search results for "Molecular"

showing 10 items of 32340 documents

Regulation of Nicotiana tabacum osmotic stress-activated protein kinase and its cellular partner GAPDH by nitric oxide in response to salinity

2010

Several studies focusing on elucidating the mechanism of NO (nitric oxide) signalling in plant cells have highlighted that its biological effects are partly mediated by protein kinases. The identity of these kinases and details of how NO modulates their activities, however, remain poorly investigated. In the present study, we have attempted to clarify the mechanisms underlying NO action in the regulation of NtOSAK (Nicotiana tabacum osmotic stress-activated protein kinase), a member of the SNF1 (sucrose non-fermenting 1)-related protein kinase 2 family. We found that in tobacco BY-2 (bright-yellow 2) cells exposed to salt stress, NtOSAK is rapidly activated, partly through a NO-dependent pr…

0106 biological sciencesOsmosisSalinityNicotiana tabacumMolecular Sequence DataNitric Oxide01 natural sciencesBiochemistry03 medical and health sciencesEnzyme activatorStress PhysiologicalTobaccoASK1[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceProtein kinase AMolecular BiologyGlyceraldehyde 3-phosphate dehydrogenaseCells Cultured030304 developmental biologyPlant Proteins0303 health sciencesbiologyKinaseGlyceraldehyde-3-Phosphate DehydrogenasesLife SciencesCell BiologyS-Nitrosylationbiology.organism_classification3. Good healthBiochemistrybiology.proteinPhosphorylationProtein Kinases010606 plant biology & botany
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Kinetic studies on protoporphyrinogen oxidase inhibition by diphenyl ether herbicides

1991

Diphenyl ethers (DPEs) and related herbicides are powerful inhibitors of protoporphyrinogen oxidase, an enzyme involved in the biosynthesis of haems and chlorophylls. The inhibition kinetics of protoporphyrinogen oxidase of various origins by four DPEs, (methyl)-5-[2-chloro-4-(trifluoromethyl)phenoxy]-2-nitrobenzoic acid (acifluorfen and its methyl ester, acifluorfen-methyl), methyl-5-[2-chloro-4-(trifluoromethyl) phenoxy]-2-chlorobenzoate (LS 820340) and methyl-5-[2-chloro-5-(trifluoromethyl)phenoxy]-2-nitrobenzoic acid (RH 5348), were studied. The inhibitions of the enzymes from maize (Zea mays) mitochondrial and etiochloroplastic membranes and mouse liver mitochondrial membranes were com…

0106 biological sciencesOxidoreductases Acting on CH-CH Group DonorsStereochemistry[SDV]Life Sciences [q-bio]Carboxylic acidMitochondria LiverEtherSaccharomyces cerevisiaeAcifluorfen01 natural sciencesBiochemistryMitochondrial ProteinsMiceStructure-Activity Relationship03 medical and health scienceschemistry.chemical_compoundMALHERBOLOGIEPhenolsAnimalsProtoporphyrinogen OxidaseMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesTrifluoromethylFlavoproteinsHerbicidesDiphenyl etherIntracellular MembranesCell BiologyPlantsMitochondriaProtoporphyrinogen IX[SDV] Life Sciences [q-bio]KineticsEnzymechemistryProtoporphyrinogen oxidaseOxidoreductasesEthersResearch Article010606 plant biology & botanyBiochemical Journal
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Characterization of (3H) acifluorfen binding to purified pea etioplasts, and evidence that protoporphyrinogen oxidase specifically binds acifluorfen

1992

It is now generally accepted that protoporphyrinogen oxidase is the target-enzyme for diphenylether-type herbicides. Recent studies [Camadro, J-M., Matringe, M., Scalla, R. & Labbe, P. (1991) Biochem. J. 277, 17–21] have revealed that in maize, diphenyl ethers competitively inhibit protoporphyrinogen oxidase with respect to its substrate, protoporphyrinogen IX. In this study, we show that, in purified pea etioplast, [3H]acifluorfen specifically binds to a single class of high-affinity binding sites with an apparent dissociation constant of 6.2 ± 1.3 nM and a maximum density of 29 ± 5 nmol/g protein. [3H]Acifluorfen binding reaches equilibrium in about 1 min at 30°C. Half dissociation occurs…

0106 biological sciencesOxidoreductases Acting on CH-CH Group DonorsStereochemistry[SDV]Life Sciences [q-bio]PhthalimidesAcifluorfen01 natural sciencesBiochemistrySubstrate Specificity03 medical and health scienceschemistry.chemical_compoundMALHERBOLOGIEEtioplastProtoporphyrinogen OxidaseBinding siteComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classificationOrganelles0303 health sciencesOxidase testBinding SitesPlants MedicinalProtoporphyrin IXMolecular StructureBIOCHIMIEHerbicidesFabaceaeProtoporphyrinogen IX[SDV] Life Sciences [q-bio]KineticsEnzymechemistryBiochemistryNitrobenzoatesProtoporphyrinogen oxidaseOxidoreductases010606 plant biology & botany
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Synthesis and properties of a photoaffinity labeling reagent for protoporphyrinogen oxidases, the target enzymes of diphenyl ether herbicides

1994

A diazoketone 3 has been synthesized in two steps from acifluorfen 1, a diphenyl ether herbicide. Like the parent compound 1, the diazoketone 3 is toxic to plant cells and inhibits protoporphyrinogen oxidase, the molecular target of diphenyl ether herbicides. On photolysis of 3 in methanol, the generated carbene mainly undergoes the Wolff rearrangement to a ketene which further adds methanol, but many other products are observed. A tritiated derivative of 3 has been prepared which is suitable for photoaffinity labeling experiments.

0106 biological sciencesOxidoreductases Acting on CH-CH Group Donors[SDV]Life Sciences [q-bio]Clinical BiochemistryPharmaceutical ScienceKeteneAcifluorfen01 natural sciencesBiochemistry03 medical and health scienceschemistry.chemical_compoundDrug DiscoveryOrganic chemistryProtoporphyrinogen OxidaseMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesPhotolysisPhotoaffinity labelingMolecular StructureBIOCHIMIEHerbicidesOrganic ChemistryDiphenyl etherWolff rearrangementAffinity Labels[SDV] Life Sciences [q-bio]chemistryTOXICOLOGIEReagentMolecular MedicineProtoporphyrinogen oxidaseIndicators and ReagentsMethanolSoybeansOxidoreductases010606 plant biology & botany
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Bacterial rhamnolipids are novel MAMPs conferring resistance to Botrytis cinerea in grapevine

2009

International audience; Rhamnolipids produced by the bacteria Pseudomonas aeruginosa are known as very efficient biosurfactant molecules. They are used for a wide range of industrial applications, especially in food, cosmetics and pharmaceutical formulations as well as in bioremediation of pollutants. In this paper, the role of rhamnolipids as novel molecules triggering defence responses and protection against the fungus Botrytis cinerea in grapevine is presented. The effect of rhamnolipids was assessed in grapevine using cell suspension cultures and vitro-plantlets. Ca2+ influx, mitogen-activated protein kinase activation and reactive oxygen species production form part of early signalling…

0106 biological sciencesPOTENTIATIONPhysiologyPlant ScienceFungusmedicine.disease_cause01 natural sciencesPSEUDOMONAS AERUGINOSAMicrobiologySurface-Active Agents03 medical and health sciencesBioremediationBOTRYTIS CINEREA[CHIM.ANAL]Chemical Sciences/Analytical chemistrySpore germinationmedicineGRAPEVINEVitis[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Cells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyBotrytis cinerea[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesbiologyPseudomonas aeruginosa[CHIM.ORGA]Chemical Sciences/Organic chemistryfungiPLANT DEFENCE[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyRHAMNOLIPIDESpores Fungalbiology.organism_classification[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyRNA PlantCalciumBotrytisMAMPsGlycolipidsMitogen-Activated Protein KinasesReactive Oxygen SpeciesBacteria010606 plant biology & botany
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A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies).

2013

Background Higher-level relationships within the Lepidoptera, and particularly within the species-rich subclade Ditrysia, are generally not well understood, although recent studies have yielded progress. We present the most comprehensive molecular analysis of lepidopteran phylogeny to date, focusing on relationships among superfamilies. Methodology / Principal Findings 483 taxa spanning 115 of 124 families were sampled for 19 protein-coding nuclear genes, from which maximum likelihood tree estimates and bootstrap percentages were obtained using GARLI. Assessment of heuristic search effectiveness showed that better trees and higher bootstrap percentages probably remain to be discovered even …

0106 biological sciencesParaphylyNonsynonymous substitutionEvolutionary GeneticsAnimal EvolutionTineoideaZoologylcsh:MedicineBiologyAnimal PhylogeneticsMoths010603 evolutionary biology01 natural sciences03 medical and health sciencesDitrysiaMonophylyPhylogeneticsMolecular SystematicsEvolutionary ModelingAnimalsEvolutionary Systematicslcsh:ScienceBiologyPhylogeny030304 developmental biologyTaxonomy0303 health sciencesEvolutionary BiologyMultidisciplinaryPopulation Biologylcsh:RComputational Biologybiology.organism_classificationOrganismal EvolutionPhylogeneticsTaxonBombycoideaAnimal Taxonomylcsh:QZoologyButterfliesPopulation GeneticsResearch ArticlePLoS ONE
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Chlamyphilone, a Novel Pochonia chlamydosporia Metabolite with Insecticidal Activity

2019

Metabolites from a collection of selected fungal isolates have been screened for insecticidal activity against the aphid Acyrthosiphon pisum. Crude organic extracts of culture filtrates from six fungal isolates (Paecilomyces lilacinus, Pochonia chlamydosporia, Penicillium griseofulvum, Beauveria bassiana, Metarhizium anisopliae and Talaromyces pinophilus) caused mortality of aphids within 72 h after treatment. In this work, bioassay-guided fractionation has been used to characterize the main bioactive metabolites accumulated in fungal extracts. Leucinostatins A, B and D represent the bioactive compounds produced by P. lilacinus. From P. griseofulvum and B. bassiana extracts, griseofulvin an…

0106 biological sciencesPenicillium griseofulvumInsecticidesMagnetic Resonance SpectroscopyMetabolitePharmaceutical ScienceMetarhizium anisopliaeBeauveria bassianabeneficial microbesBassiana01 natural sciencesArticleAnalytical Chemistrylcsh:QD241-441chemistry.chemical_compoundAscomycotalcsh:Organic chemistryDrug DiscoveryFood sciencePhysical and Theoretical ChemistryBiological ProductsbiologyMolecular Structure010405 organic chemistryChemistrysecondary metabolitesOrganic Chemistryfungifood and beveragespea aphidbiology.organism_classificationGriseofulvinazaphilonesBeauvericin0104 chemical sciencesAcyrthosiphon pisum010602 entomologybeneficial microbesChemistry (miscellaneous)Molecular Medicinesecondary metabolites; beneficial microbes; pea aphid; azaphilonesMolecules
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Molecular phylogeny of the marine dinoflagellate genus Heterodinium (Dinophyceae)

2012

The dinoflagellate genus Heterodinium has unusual morphological characters such as a mid-ventral intercalary plate with a pore, a small plate in the left side of the dorsal epitheca, three antapical plates, and a well-developed anterior cingular list. We obtained the first SSU rDNA sequences from single cells of six species of Heterodinium from Mediterranean coastal and open waters. They included the type species H. scrippsii and H. rigdeniae and representatives of the other subgenera, Sphaerodinium (H. doma, H. milneri, H. globosum) and Platydinium (H. pavillardii). SSU rDNA phylogeny showed that Heterodinium spp. formed a well-supported monophyletic group (100% bootstrap support) composed…

0106 biological sciencesPeridiniales0303 health sciencesbiologyPlant ScienceAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesGymnodiniales03 medical and health sciencesEpithecaMonophylyType speciesGenusBotanyMolecular phylogenetics14. Life underwater[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography030304 developmental biologyDinophyceae
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SNP markers for black-grass (Alopecurus myosuroides Huds.) genotypes resistant to Acetyl CoA-carboxylase inhibiting herbicides

2002

Chloroplastic acetyl CoA-carboxylase (ACCase) is the target of widely used, specific graminicide herbicides: cyclohexanediones (CHDs) and aryloxyphenoxypropionates (APPs). Resistance to these compounds is a worldwide, increasing problem. Population genetic studies aimed at understanding the dynamics of this situation and the diffusion of resistance genes within and between weed populations are challenging because biological assays are not adequate for this purpose, and because different mechanisms of resistance confer a similar resistance phenotype. Molecular markers for specifically detecting resistance genes are therefore urgently needed to conduct such studies. For this purpose, we clone…

0106 biological sciencesPesticide resistancePopulationSingle-nucleotide polymorphism[SDV.GEN] Life Sciences [q-bio]/GeneticsBiology01 natural sciencesACETYL COA-CARBOXYLASEchemistry.chemical_compoundMolecular markerGenotypeGeneticsVULPINAlleleeducationGenotypingComputingMilieux_MISCELLANEOUSGenetics[SDV.GEN]Life Sciences [q-bio]/Geneticseducation.field_of_studyAlopecurus myosuroides04 agricultural and veterinary sciencesGeneral Medicinebiology.organism_classificationchemistry040103 agronomy & agriculture0401 agriculture forestry and fisheriesAgronomy and Crop Science010606 plant biology & botanyBiotechnology
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Interspecific variation in total phenolic content in temperate brown algae

2017

Marine algae synthesize secondary metabolites such as polyphenols that function as defense and protection mechanisms. Among brown algae, Fucales and Dictyotales (Phaeophyceae) contain the highest levels of phenolic compounds, mainly phlorotannins, that play multiple roles. Four temperate brown algae (Cystoseira amentacea, Cystoseira compressa, Dictyopteris polypodioides and Padina pavonica) were studied for total phenolic contents. Total phenolic content was determined colorimetrically with the Folin-Ciocalteu reagent. Significant differences in total phenolic content were observed between leathery and sheetlike algae and also within each morphological group. Among the four species, the she…

0106 biological sciencesPhaeophyceaePadina pavonicamacromolecular substancesPlant Science010501 environmental sciencesBiology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologySecondary metaboliteAlgaeBotanyMediterranean SeaTemperate climateSettore BIO/04 - Fisiologia Vegetalelcsh:QH301-705.5External and internal factorTotal phenolic content0105 earth and related environmental sciencesExternal and internal factorsSecondary metabolitesSettore BIO/02 - Botanica Sistematica010604 marine biology & hydrobiologyBiochemistry (medical)DictyotalesInterspecific competitionbiology.organism_classificationBrown algaelcsh:Biology (General)PolyphenolSettore BIO/03 - Botanica Ambientale E ApplicataFucalesJournal of Biological Research - Bollettino della Società Italiana di Biologia Sperimentale
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