Search results for "Molecule"

showing 10 items of 5162 documents

Cyclobutane Pyrimidine Photodimerization of DNA/RNA Nucleobases in the Triplet State

2010

The photoinduced formation of cyclobutane pyrimidine dimers in the triplet excited state of the DNA/RNA pyrimidine nucleobases pairs has been studied at the CASPT2 level of theory. A stepwise mechanism through the triplet state of the homodimer is proposed for the pairs of nucleobases cytosine, thymine, and uracil involving a singlet−triplet crossing intermediary structure of biradical character representing the most favorable triplet state conformation of the nucleobases as found in the DNA environment. The efficiency of the mechanism will be modulated by two factors: the effectiveness of the triplet−triplet energy transfer process from a donor photosensitizer molecule, which relates to th…

congenital hereditary and neonatal diseases and abnormalitiesPhysics::Biological PhysicsQuantitative Biology::BiomoleculesPyrimidineStereochemistryPyrimidine dimerUracilPhotochemistryQuantitative Biology::GenomicsNucleobaseThymineCyclobutanechemistry.chemical_compoundIntersystem crossingchemistryGeneral Materials SciencePhysical and Theoretical ChemistryCytosineThe Journal of Physical Chemistry Letters
researchProduct

Gallium(III) and Indium(III) Complexes with meso-Monophosphorylated Porphyrins: Synthesis and Structure. A First Example of Dimers Formed by the Self…

2017

International audience; The synthesis and structural characterization, both in solution by means of H-1 and P-31 NMR and UV-vis spectroscopies and in the solid state by X-ray diffraction on single crystal, of a series of gallium(III) and indium(III) meso-mono(diethoxyphosphoryl)porphyrins bearing different peripheral substituents as well as the corresponding monoesters and phosphonic acids are reported. This work describes the first example of the X-ray structure of a self-assembled dimer formed via strong binding between the oxygen atom of the phosphonate substituent and the gallium(III) cations of adjacent porphyrin molecules [Ga-O = 1.9708(13) angstrom].

coordinationchlorideDimerSubstituentchemistry.chemical_elementmalaria pigment[CHIM.INOR]Chemical Sciences/Inorganic chemistry010402 general chemistryPhotochemistry01 natural sciencessupramolecular chemistryInorganic Chemistrychemistry.chemical_compoundoctaethylporphyrinMoleculecleavagePhysical and Theoretical ChemistryGalliumsoluble diamagnetic modelmolecular-structure010405 organic chemistrycrystal-structure[ CHIM.INOR ] Chemical Sciences/Inorganic chemistryPhosphonatePorphyrin0104 chemical sciencesCrystallographychemistryoxidesSingle crystalIndium
researchProduct

Reactivity of bis(cyclohexylammonium) 4-nitrophenylphosphate with SnMe3 Cl. X-ray structure of 4-NO2 C6 H4 PO4(SnMe3)2·H2 O

2014

The reaction of bis(cyclohexylammonium) 4-nitrophenylphosphate with Me3 SnCl (1:2) under reflux in ethanol yielded the title compound 4-NO2 C6 H4 PO4(SnMe3)2H2 O (1). The X-ray crystallographic analysis achieved on single crystals obtained by slow evaporation at room temperature revealed the formation of an unexpected supramolecular coordination network. The elementary building block can be viewed as two Me3 Sn moieties linked by a bridging 4-nitrophenylphosphate ligand. The two tin atoms are five-coordinated and describe a trans-Me3 SnO2 geometry in a trigonal bipyramidal arrangement. However, the Sn atoms are distinct, exhibiting two different environments. Thus, one is linked to two axia…

coordination-driven self-assemblyHydrogen bondChemistryStereochemistryIntermolecular forceMetals and AlloysSupramolecular chemistryX-raychemistry.chemical_elementGeneral Chemistryhydrogen bondingCondensed Matter PhysicsChemistryCrystallographyX-ray crystallographyAtomtrimethyltin(iv) 4-nitrophenylphosphatoMaterials ChemistryMoleculeTinQD1-999x-ray crystallographyMain Group Metal Chemistry
researchProduct

The first copper(I)-olefin complexes bearing a 1,3,4-oxadiazole core: Alternating-current electrochemical crystallization, X-ray experiment and DFT s…

2017

By means of alternating-current electrochemical technique, four new π-complexes, namely [Cu2(C11H10N2OS)2Br1.91Cl0.09] (1), [Cu(C11H10N2OS)NO3] (2), [Cu2(C11H10N2OS)2(H2O)2](BF4)2 (3) and [Cu2(C11H10N2OS)2(H2O)2](ClO4)2 (4), were obtained using copper(II) salts and the 2-(allylthio)-5-phenyl-1,3,4-oxadiazole (C11H10N2OS) ligand. The metal and halogen centers in 1 form Cu2X2 dimers; the N-atom from the oxadiazole ring and the Cdouble bond; length as m-dashC bond of the allyl group from the same ligand complete the copper coordination environment, giving [Cu(C11H10N2OS)X]2 isolated fragments. The ligand plays the same chelating role in 2, whereas the O (NO3) atom occupies the third position i…

crystal structure3Stereochemistry1chemistry.chemical_elementOxadiazolekupariCrystal structure134-oxadiazole derivatives4-oxadiazole derivatives010402 general chemistryElectrochemistryRing (chemistry)DFT01 natural sciencesolefinpi-complexInorganic ChemistryMetalchemistry.chemical_compoundraman spectroscopyMaterials ChemistryMoleculePhysical and Theoretical Chemistryta116010405 organic chemistryLigandac-electrochemical techniquekompleksiyhdisteetCoppercopper(I)0104 chemical sciencesCrystallographychemistryvisual_artvisual_art.visual_art_mediumPolyhedron
researchProduct

Double-CO32− Centered [CoII5] Wheel and Modeling of Its Magnetic Properties

2010

A high-spin Co(II) cluster with a rare pentagonal molecular structure and formula [Co(5)(CO(3))(2)(bpp)(5)]ClO(4) (1; Hbpp is 2,6-bis(phenyliminomethyl)-4-methylphenolate) has been synthesized and characterized by single-crystal X-ray diffraction. This topology arises from fusing five [Co(2)(bpp)] moieties in a cyclic manner around two CO(3)(2-) central ligands, resulting in propeller-like configuration. The irregular coordination of the carbonate ions to the metal centers results in a combination of coordination numbers (CNs) of the Co(II) ions of five and six. The bulk magnetization of this complicated magnetically exchanged system has been modeled successfully by employing a matrix diago…

crystal structureCoordination numberInorganic chemistrycarbonatesCatalysisIonCoordination complexMetalMagnetizationCluster (physics)Moleculecarbonate ligandschemistry.chemical_classificationOrganic Chemistrycarbonate ligands; carbonates; cobalt; coordination chemistry; density functional calculations; magnetic properties; spin-orbit coupling; crystal structure.General ChemistrySpin–orbit interactioncobaltspin-orbit couplingCrystallographychemistryvisual_artdensity functional calculationscoordination chemistryvisual_art.visual_art_mediummagnetic propertiesChemistry - A European Journal
researchProduct

Crystal structure of 2-{[1-(2-methyl-5-nitro-1H-imidazol-1-yl)propan-2-yloxy]carbonyl}benzoic acid

2014

In the title compound, C15H15N3O6, the dihedral angle between the planes of the benzene and imidazole rings is 34.93 (10)°. An intramolecular C—H...O hydrogen bond is observed. In the crystal, O—H...N hydrogen bonds link the molecules into chains parallel to thecaxis.

crystal structureCrystal structurepharmaceuticalsDihedral angleBioinformaticsMedicinal chemistrynitro­imidazolesCrystalchemistry.chemical_compoundImidazoleGeneral Materials SciencePhysics::Chemical PhysicsO—H⋯N hydrogen bondsBenzeneBenzoic acidQuantitative Biology::BiomoleculesnitroimidazolesCrystallographyHydrogen bondGeneral ChemistryCondensed Matter PhysicsData ReportsO—H...N hydrogen bondschemistryQD901-999NitroActa Crystallographica Section E Structure Reports Online
researchProduct

Crystal structure of 1-(2-fluoro­benzo­yl)-2,7-di­meth­oxy­naphthalene

2014

The asymmetric unit of the compound contains two independent conformers. Each conformer is stacked along the a axis to form columns through van der Waals inter­actions only.

crystal structureCrystallographyAromaticityGeneral ChemistryCrystal structureDihedral angleCondensed Matter PhysicsRing (chemistry)Bioinformatics1-aroyl­naphthalene compoundResearch Communicationschemistry.chemical_compoundsymbols.namesakeCrystallographynon-coplanarly accumulated aromatic rings structurechemistryQD901-999symbolsMoleculeGeneral Materials Sciencevan der Waals forceConformational isomerism1-aroylnaphthalene compoundNaphthalenespatial organizationActa Crystallographica Section E: Structure Reports Online
researchProduct

Crystal structure of the diglycidyl ether of eugenol

2017

The diep­oxy monomer (DGE-Eu) was synthesized from eugenol by a three-step reaction. It consists of a 1,2,4-tris­ubstituted benzene ring substituted by diglycidyl ether, a meth­oxy group and a methyl­oxirane group. The three-membered oxirane rings are inclined to the benzene ring by 61.0 (3) and 27.9 (3)°. In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds, forming layers parallel to the ab plane.

crystal structureDiglycidyl etherEpoxideep­oxy thermoset prepolymer02 engineering and technologyCrystal structure010402 general chemistryRing (chemistry)01 natural scienceseugenol derivativeResearch CommunicationsCrystalchemistry.chemical_compound[ CHIM.CRIS ] Chemical Sciences/CristallographyPolymer chemistry[CHIM.CRIS]Chemical Sciences/Cristallography[CHIM]Chemical SciencesGeneral Materials Science[CHIM.CRIS] Chemical Sciences/CristallographyBenzeneComputingMilieux_MISCELLANEOUSbio-based mol­eculebio-based moleculeCrystallographyHydrogen bondGeneral Chemistry[PHYS.MECA]Physics [physics]/Mechanics [physics]021001 nanoscience & nanotechnologyCondensed Matter Physicshydrogen bonding3. Good health0104 chemical sciencesCrystallographyMonomerchemistryQD901-999oxiraneepoxy thermoset prepolymer[PHYS.MECA] Physics [physics]/Mechanics [physics]0210 nano-technology
researchProduct

Crystal structure of 3-mesityl-1-[(pyridin-2-yl)methyl]-3,4,5,6-tetrahydropyrimidin-1-ium bromide monohydrate

2015

In the title hydrated salt, C19H24N3+·Br−·H2O, the values of the N—C bond lengths within the tetrahydropyrimidinium ring indicate delocalization of the N=C double bond. In the cation, the dihedral angle formed by the pyridine and benzene rings is 14.97 (12)°. In the crystal, ions and water molecules are linked by O—H...Br, O—H...N, C—H...Br and C—H...O hydrogen bonds into chains running parallel to thebaxis.

crystal structureDouble bondCrystal structureDihedral angleBioinformaticsRing (chemistry)lcsh:Chemistrychemistry.chemical_compoundBromidePyridineGeneral Materials SciencePhysics::Chemical Physicstetrahydropyrimidiniumchemistry.chemical_classificationQuantitative Biology::BiomoleculesChemistryHydrogen bondGeneral ChemistryCondensed Matter Physicshydrogen bondingData ReportsBond lengthCrystallographyNHC precursorlcsh:QD1-999tetra­hydro­pyrimidiniumActa Crystallographica Section E: Crystallographic Communications
researchProduct

Crystal structure and computational study of 3,4-dihydroxy-3-hydroxymethyl-9-methyl-6-methylidene-3a, 4,5,6,6a, 9,9a, 9b-octahydroazuleno[4,5-b]furan…

2015

WOS: 000370762300147

crystal structureHOMOLUMOMOPACPM3Crystal structureRing (chemistry)BioinformaticsMedicinal chemistryCentaurea polypodiifoliaCNDOResearch CommunicationsCrystalCNDO/2theoretical investigationchemistry.chemical_compoundFuranGeneral Materials SciencePhysics::Chemical PhysicsHOMO/LUMOQuantitative Biology::Biomoleculescynarinin ACrystallographyHydrogen bondGeneral ChemistryCondensed Matter PhysicschemistryQD901-999
researchProduct