Search results for "Molecule"

showing 10 items of 5162 documents

Hexanuclear copper(ii) cage with {Cu3O⋯H⋯OCu3} core supported by a dicompartmental oxime ligand with m-xylyl spacer: synthesis, molecular structure a…

2010

A new dicompartmental dioxime ligand (H(2)L) with m-xylyl spacer between the donor sites has been synthesised by Schiff-base condensation of α,α'-diamino-m-xylene and diacetyl monooxime. The ligand reacts with copper(ii) salts giving rise to hexanuclear tricationic copper(II) cage complexes [Cu(II)(6)(μ(3)-O···H···O-μ(3))L(3)(H(2)O)(6)]X(3) (X = BF(4), 1a; X = ClO(4), 1b). The complexes have been characterised by different analytical and spectroscopic techniques and confirmed the hexanuclear structure even in solution. Single crystal X-ray diffraction studies of both the complexes revealed a very similar core structure with three dicompartmental ligands supporting two triangular Cu(3)O core…

crystal structureHydrogen bondLigandExchange interactionHexanuclear copper complexchemistry.chemical_elementCrystallography X-RayLigandsOximeHexanuclear copper complex; oxime; crystal structureoximeCopperInorganic ChemistryMagneticschemistry.chemical_compoundCrystallographychemistryUnpaired electronOximesOrganometallic CompoundsMoleculeSingle crystalCopperDalton Transactions
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A Gadolinium(III) Complex Based on the Thymine Nucleobase with Properties Suitable for Magnetic Resonance Imaging

2021

The paramagnetic gadolinium(III) ion is used as contrast agent in magnetic resonance (MR) imaging to improve the lesion detection and characterization. It generates a signal by changing the relaxivity of protons from associated water molecules and creates a clearer physical distinction between the molecule and the surrounding tissues. New gadolinium-based contrast agents displaying larger relaxivity values and specifically targeted might provide higher resolution and better functional images. We have synthesized the gadolinium(III) complex of formula [Gd(thy)2(H2O)6](ClO4)3·2H2O (1) [thy = 5-methyl-1H-pyrimidine-2,4-dione or thymine], which is the first reported compound based on gadolinium…

crystal structureMaterials scienceMagnetometerQH301-705.5GadoliniumContrast Mediachemistry.chemical_elementmetal complexesCrystallography X-Ray010402 general chemistry01 natural sciencesArticleCatalysisIonNucleobaselaw.inventionInorganic Chemistrymagnetic resonanceMagneticsParamagnetismchemistry.chemical_compoundNuclear magnetic resonanceHeterocyclic CompoundslawthyminemedicineMoleculePhysical and Theoretical ChemistryBiology (General)Molecular BiologyQD1-999SpectroscopyMolecular Structuremedicine.diagnostic_test010405 organic chemistryOrganic ChemistryWaterMagnetic resonance imagingGeneral Medicinecontrast agentMagnetic Resonance Imaging0104 chemical sciencesComputer Science ApplicationsThymineChemistrychemistryrelaxivityProtonsgadolinium
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2-Methyl-N-(pyrazin-2-yl)propanamide–1,2,4,5-tetrafluoro-3,6-diiodobenzene (2/1)

2016

In the title compound, C8H11N3O·0.5C6F4I2, molecules ofiPr-substituted pyrazine are co-crystallized with 1,4-diiodo-2,3,5,6-tetrafluorobenzene. The complete molecule of 1,4-diiodo-2,3,5,6-tetrafluorobenzene is generated by an inversion centre at the middle of the aromatic ring. Both molecules have normal geometry and theiPr acylamine group is disordered over two sets of sites with an occupancy ratio of 0.51:0.49. In the crystal, the components are linked by I...N halogen bonds [2.830 (2) Å] and C—H...F interactions are observed.

crystal structurePyrazineStereochemistryhalogen bondsGeneral MedicineCrystal structuredisorder010402 general chemistry010403 inorganic & nuclear chemistryRing (chemistry)01 natural sciencesPropanamideMedicinal chemistry2-amino­pyrazine0104 chemical sciencesCrystalchemistry.chemical_compoundchemistryHalogenlcsh:QD901-999Moleculelcsh:CrystallographyBenzene2-aminopyrazineIUCrData
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Geometrical and conformational preferences of the 9‐fluorenylmethoxycarbonyl‐amino moiety

2004

Structural parameters, originating from x-ray crystallographic data, have been compiled for 13 derivatives of amino acids, peptides and related compounds, which contain a total of 14 Fmoc-NH- moieties. For these moieties, molecular geometries and conformations--described by the omegao, theta1, theta2 and theta3' torsion angles--were analysed and compared with the corresponding parameters for the Z-NH- and Boc-NH-moieties (290 and 553, respectively). To gain a deeper insight into the conformational features of the Fmoc-NH- moiety, ab initio free molecule calculations were performed for fully relaxed minima. Also the potential energy surface as a function of the torsion angles (theta3', theta…

crystal structureStereochemistryAb initioMolecular ConformationCrystal structureCrystallography X-RayBiochemistryBoc amino protectionStructure-Activity RelationshipfluoreneStructural BiologyAb initio quantum chemistry methodsDrug DiscoveryMoleculeMoietyurethane geometryFmoc amino protectionAmino AcidsMolecular BiologyPharmacologyFluorenesMolecular StructureChemistryHydrogen bondab initio calculationsOrganic ChemistryHydrogen BondingGeneral MedicineZ amino protectionMolecular geometryPotential energy surfaceMolecular MedicineCrystallizationPeptidesN‐terminally protected peptidesJournal of Peptide Science
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Crystal structure of [tris(4,4-bipyridine)]diium bis(1,1,3,3-tetracyano-2-ethoxypropenide) trihydrate

2016

In the title hydrated salt, which was obtained from the hydro­thermal reaction between between potassium 1,1,3,3-tetra­cyano-2-eth­oxy­propenide and 4,4′-bi­pyridine in the presence of iron(II) sulfate hepta­hydrate, the ionic components are linked into a three-dimensional network by C—H⋯N hydrogen bonds.

crystal structureStereochemistryIonic bondingmolecular structureCrystal structurehydro­thermal synthesis010402 general chemistry010403 inorganic & nuclear chemistry01 natural sciencesResearch Communicationslaw.inventionlcsh:Chemistrychemistry.chemical_compoundpolynitrile anionslawPyridineMoleculeGeneral Materials ScienceHydrothermal synthesisQDCrystallizationta215ta116mol­ecular structureHydrogen bondChemistryDASGeneral ChemistryCondensed Matter PhysicsQD Chemistryhydrogen bonding0104 chemical sciences44'-BipyridineCrystallographyhydrothermal synthesislcsh:QD1-999HydrateMolecular structure
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N-(6-Methylpyridin-2-yl)mesitylenesulfonamide and acetic acid--a salt, a cocrystal or both?

2015

In the solid obtained fromN-(6-methylpyridin-2-yl)mesitylenesulfonamide and acetic acid, the constituents interactviatwo N—H...O hydrogen bonds. The H atom situated in one of these short contacts is disordered over two positions: one of these positions is formally associated with an adduct of the neutral sulfonamide molecule and the neutral acetic acid molecule, and corresponds to a cocrystal, while the alternative site is associated with salt formation between a protonated sulfonamide molecule and deprotonated acetic acid molecule. Site-occupancy refinements and electron densities from difference Fourier maps suggest a trend with temperature, albeit of limited significance; the cocrystal i…

crystal structureStereochemistryPyridinesProtonationCrystallography X-RayCocrystalMedicinal chemistrysalt-cocrystal continuumAdductInorganic ChemistryAcetic acidchemistry.chemical_compoundDeprotonationpharmaceutically active ingredientsMaterials ChemistryMoleculesaltPhysical and Theoretical Chemistrycocrystalta116Acetic Acidchemistry.chemical_classificationSulfonamidesmesitylenesulfonamideMolecular StructureHydrogen bondHydrogen BondingCondensed Matter PhysicsSulfonamidebenzenesulfonamidechemistryIR spectroscopySaltsActa crystallographica. Section C, Structural chemistry
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Novel 2,6-disubstituted phenylboronic compounds - Synthesis, crystal structures, solution behaviour and reactivity

2015

Abstract 2,6-Diformylphenylboronic acid has been synthesized and characterized both in the solid state as well as in solution. In crystal, an unusual structural pattern has been found with the formation of intermolecular hydrogen bonds by B(OH) 2 and CHO groups as well as water molecules. In solution tautomeric equilibrium with the formation of oxaborole ring by one of the formyl groups was proved on the basis of multinuclear NMR spectroscopy. The title compound reacts with secondary mono- and diamines to form various types of substituted benzoxaboroles, which have been characterized by XRD and spectroscopic methods.

crystal structureboronic acidsChemistryHydrogen bondOrganic ChemistryCrystal structureNuclear magnetic resonance spectroscopyRing (chemistry)BiochemistryTautomerreductive aminationtautomeric equilibriaInorganic ChemistryCrystalbenzoxaborolesPolymer chemistryMaterials ChemistryMoleculeReactivity (chemistry)Physical and Theoretical ChemistryJournal of Organometallic Chemistry
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Crystal structure of cis-bis­(μ-β-alanine-κ2 O:O′)bis[tri­chlorido­rhenium(III)](Re–Re) sesquihydrate

2015

A dirhenium(III) cis-di­carboxyl­ate complex is reported, which is representative of a small class of zwitterionic ammonia­carboxyl­ato complexes involving a quadruple metal–metal bond.

crystal structurechemistry.chemical_elementCrystal structurerheniumChlorideIonResearch CommunicationsCrystallcsh:Chemistryquadruple metal–metal bondmedicineMoleculeGeneral Materials ScienceclusterAlanineLigandGeneral ChemistryRheniumCondensed Matter PhysicsCrystallographychemistrylcsh:QD1-999β-alaninezwitterionic ammonia­carboxyl­ato complexzwitterionic ammoniacarboxylato complexmedicine.drugActa Crystallographica Section E: Crystallographic Communications
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rac-11-Selena-12,13-diazabicyclo[10.3.0]pentadeca-10a(13a),12-dien-1-ol

2021

The title compound, C12H20N2OSe, crystallizes in strands of enantiomeric molecules connected via O—H...N hydrogen bonds. There are only slight deviations from an ideal gauche conformation in the decamethylene chain, indicating just a little strain.

crystal structureheterocyclesCrystallographyBicyclic moleculeStrain (chemistry)010405 organic chemistryHydrogen bondChemistryStereochemistryCrystal structure010403 inorganic & nuclear chemistry01 natural sciences0104 chemical sciencesQD901-999medium-sized ringseleniumDeca-IUCrData
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Intramolecular 1,5-S...N σ-hole interaction in (E)-N′-(pyridin-4-ylmethylidene)thiophene-2-carbohydrazide

2020

The hydrazide-hydrazone forms inverse dimers via hydrogen bonding, but its conformation is defined by the presence of an intra­molecular chalcogen bond. Electrostatic forces dominate in the crystal packing and give rise to a layered supra­molecular structure.

crystal structurehirshfeld surfaceDouble bondImineStackingCrystal structureCarbohydrazide010402 general chemistryRing (chemistry)01 natural sciencesResearch Communicationsenergy frameworkslcsh:Chemistrychemistry.chemical_compoundchalcogen bondingGeneral Materials Sciencechemistry.chemical_classificationQuantitative Biology::Biomoleculesintermolecular interaction energies010405 organic chemistryHydrogen bondGeneral Chemistryinter­molecular inter­action energieshydrogen bondingCondensed Matter Physics4-pyridinecarboxaldehyde 2-thienyl hydrazone0104 chemical sciencesCrystallographylcsh:QD1-999chemistry4-pyridine­carboxaldehyde 2-thienyl hydrazoneMonoclinic crystal systemActa Crystallographica Section E Crystallographic Communications
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