Search results for "Mutant"

showing 10 items of 670 documents

Leucine-58 in the putative 5th helical region of human interleukin (IL)-6 is important for activation of the IL-6 signal transducer, gp130

1995

A model of the tertiary structure of human IL-6, derived from the crystal-structure of granulocyte-colony stimulating factor, reveals a 5th helical region in the loop between the first and second alpha-helix. To investigate the importance of this region for biological activity of IL-6, residues Glu-52, Ser-53, Ser-54, Lys-55, Glu-56, Leu-58, and Glu-60 were individually replaced by alanine. IL-6.Leu-58Ala displayed a 5-fold reduced biological activity on the IL-6 responsive human cell lines XG-1 and A375. This reduction in bioactivity was shown to be due to a decreased capacity of the mutant protein to trigger IL-6 receptor-alpha-chain-dependent binding to the IL-6 signal transducer, gp130.

Models Molecularmedicine.medical_specialtyMolecular Sequence DataBiophysicsBiologyBiochemistryBinding CompetitiveProtein Structure SecondaryMiceStructure-function analysisgp130Structural BiologyMutant proteinAntigens CDLeucineInternal medicineGeneticsmedicineCytokine Receptor gp130Tumor Cells CulturedAnimalsHumansAmino Acid SequenceMolecular BiologyAlanineHybridomasMembrane GlycoproteinsBase SequenceInterleukin-6InterleukinBiological activityCell BiologyReceptors InterleukinGlycoprotein 130Receptors Interleukin-6Protein tertiary structureCell biologyProtein Structure TertiaryEndocrinologyMutationLeucineSignal transductionSequence AlignmentCell DivisionSignal TransductionFEBS Letters
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Cloning and characterization of PRB1, a Candida albicans gene encoding a putative novel endoprotease B and factors affecting its expression

2002

Abstract Several cDNA fragments corresponding to transcripts differentially expressed under conditions that favor mycelial growth of Candida albicans were identified by the “differential display” technique. One of these was cloned and used as a probe to rescue the full gene from a genomic library of the fungus. The sequence identified a single, uninterrupted open reading frame of 1395 nucleotides encoding a putative protein of 465 residues and a theoretical molecular weight of 50.3 kDa, present in the genome as a single copy located at chromosome 2 in different strains. The gene product showed high homology with subtilisin-like proteases, mainly PRB1, the vacuolar B protease from Saccharomy…

Molecular Sequence DataMutantCatabolite repressionMicrobiologyFungal ProteinsGene productGene Expression Regulation FungalComplementary DNACandida albicansHumansAmino Acid SequenceCloning MolecularDNA FungalCandida albicansMolecular BiologyGeneGene LibraryDifferential displayBase SequencebiologyGene Expression ProfilingSerine EndopeptidasesSequence Analysis DNAGeneral Medicinebiology.organism_classificationMolecular biologyElectrophoresis Gel Pulsed-FieldBlotting SouthernOpen reading frameBiochemistryMutagenesisChromosomes FungalSequence AlignmentResearch in Microbiology
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A Red Eye Colour Mutation in Culex pipiens after X-irradiation

1963

FOUR 1–2-day-old males of Culex pipiens were irradiated with a dose of 4,000 r. The mutant ‘red eye’ (r) was isolated from F3 cultures of two of the irradiated males (♂ II and ♂ IV). From male II, there were three red-eyed females which arose out of a single F2 brother–sister mating; from male IV, 80 red-eyed females and one red-eyed male from 14 F2 brother–sister matings. According to the experimental procedure, this means that at least one sperm from male II and at least fourteen sperms from male IV carried the mutation r. Thus, the same mutation was recovered in parallel from two irradiated males. The clustered appearance of the mutation in male IV was presumably caused by the occurrence…

MultidisciplinaryEye ColorbiologyCulexResearchMutantColorAnatomybiology.organism_classificationSpermAndrologyCulexMutationMutation (genetic algorithm)Culex pipiensmedicineAnimalsRadiation GeneticsRed eyemedicine.symptomMatingNature
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Genetic dissection of plexin signaling in vivo

2014

Mammalian plexins constitute a family of transmembrane receptors for semaphorins and represent critical regulators of various processes during development of the nervous, cardiovascular, skeletal, and renal system. In vitro studies have shown that plexins exert their effects via an intracellular R-Ras/M-Ras GTPase-activating protein (GAP) domain or by activation of RhoA through interaction with Rho guanine nucleotide exchange factor proteins. However, which of these signaling pathways are relevant for plexin functions in vivo is largely unknown. Using an allelic series of transgenic mice, we show that the GAP domain of plexins constitutes their key signaling module during development. Mice …

MultidisciplinaryRHOAanimal structuresbiologyTransgenePlexinMutantMice TransgenicNerve Tissue ProteinsBiological SciencesPhenotypeCell biologyMiceSemaphorinembryonic structuresbiology.proteinAnimalsGuanine nucleotide exchange factorSignal transductionSignal Transduction
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A Multivariate Analysis on Non-nucleoside HIV-1 Reverse Transcriptase Inhibitors and Resistance Induced by Mutation

2003

This paper describes the use of multivariate statistical procedure PCA as a tool to explore the inhibitory activity of classes of NNRTIs against HIV-1 viruses (wild type and more frequent mutants, Y181C, V106A, K103N, L100I) and against RT enzyme. The analysis of correlations between biological activity and molecular descriptors or similarity indexes allowed a reliable classification of the fifty five derivatives considered in this study. The best results were obtained in the case of L100I and K103N mutants for which the higher number of assignments was found when the principal components derived from the descriptors were used. On this basis this statistical approach is proposed as a reliab…

Multivariate analysisOrganic ChemistryMutantWild typevirus diseasesBiological activityComputational biologyBiologyBioinformaticsSettore CHIM/08 - Chimica FarmaceuticaReverse transcriptaseComputer Science ApplicationsMolecular descriptorDrug DiscoveryMutation (genetic algorithm)Principal component analysisNNRTIs PCA DA resistance mutation
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Membrane Insertion of the Heptameric Staphylococcal α-Toxin Pore

2001

Abstract Staphylococcal α-toxin forms heptameric pores on eukaryotic cells. After binding to the cell membrane in its monomeric form, the toxin first assembles into a heptameric pre-pore. Subsequently, the pre-pore transforms into the final pore by membrane insertion of an amphipathic β-barrel, which comprises the “central loop” domains of all heptamer subunits. The process of membrane insertion was analyzed here using a set of functionally altered toxin mutants. The results show that insertion may be initiated within an individual protomer when its NH2 terminus activates its central loop. The activated state is then shared with the central loops of the residual heptamer subunits, which res…

MutantAllosteric regulationCell BiologyProtomerBiologyBiochemistryCell membranechemistry.chemical_compoundCrystallographyMonomerMembranemedicine.anatomical_structurechemistryAmphiphilemedicineBiophysicsLipid bilayerMolecular BiologyJournal of Biological Chemistry
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Molecular cloning and characterization of theCandida albicansUBI3 gene coding for a ubiquitin-hybrid protein

2000

Using a polyubiquitin cDNA as a probe, we have isolated a clone (pPR3, a pEMBLYe23 derivative plasmid) containing the Candida albicans UBI3 gene coding for a fusion protein. This protein is formed by one ubiquitin subunit fused, at its C-terminus, to an unrelated peptide which is similar to the ribosomal protein encoded by the 3' tail of the Saccharomyces cerevisiae UBI3 gene. Southern blot analysis of chromosomal DNA probed with the 3' non-ubiquitin tail of UBI3 indicated that only one homologous gene is present in the C. albicans genome. Heterelogous expression of pPR3 in a S. cerevisiae ubi3 mutant strain complements the mutant phenotype (slow growth) conferred by the ubi3 defect; this p…

MutantBioengineeringBiologybiology.organism_classificationApplied Microbiology and BiotechnologyBiochemistryMolecular biologyComplementary DNAGene expressionGeneticsURA3Northern blotCandida albicansGeneBiotechnologySouthern blotYeast
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Pga26 mediates filamentation and biofilm formation and is required for virulence in Candida albicans

2011

The Candida albicans gene PGA26 encodes a small cell wall protein and is upregulated during de novo wall synthesis in protoplasts. Disruption of PGA26 caused hypersensitivity to cell wall-perturbing compounds (Calcofluor white and Congo red) and to zymolyase, which degrades the cell wall β-1,3-glucan network. However, susceptibility to caspofungin, an inhibitor of β-1,3-glucan synthesis, was decreased. In addition, pga26Δ mutants show increased susceptibility to antifungals (fluconazol, posaconazol or amphotericin B) that target the plasma membrane and have altered sensitivities to environmental (heat, osmotic and oxidative) stresses. Except for a threefold increase in β-1,6-glucan and a sl…

MutantCellBiofilmVirulenceGeneral MedicineCalcofluor-whiteBiologybiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyMicrobiologyCell wallchemistry.chemical_compoundmedicine.anatomical_structurechemistrymedicineCaspofunginCandida albicansFEMS Yeast Research
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The phosphorylated pathway of serine biosynthesis is essential both for male gametophyte and embryo development and for root growth in Arabidopsis.

2013

This study characterizes the phosphorylated pathway of Ser biosynthesis (PPSB) in Arabidopsis thaliana by targeting phosphoserine phosphatase (PSP1), the last enzyme of the pathway. Lack of PSP1 activity delayed embryo development, leading to aborted embryos that could be classified as early curled cotyledons. The embryo-lethal phenotype of psp1 mutants could be complemented with PSP1 cDNA under the control of Pro35S (Pro35S:PSP1). However, this construct, which was poorly expressed in the anther tapetum, did not complement mutant fertility. Microspore development in psp1.1/psp1.1 Pro35S:PSP1 arrested at the polarized stage. The tapetum from these lines displayed delayed and irregular devel…

MutantCitric Acid CycleGreen Fluorescent ProteinsImmunoblottingArabidopsisPlant ScienceBiologyPlant RootsSerineMicrosporeMicroscopy Electron TransmissionGene Expression Regulation PlantArabidopsisSerineArabidopsis thalianaAmino AcidsPhosphorylationResearch ArticlesTapetumArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionGene Expression Regulation DevelopmentalEmbryoPhosphoserine phosphataseCell Biologybiology.organism_classificationPlants Genetically ModifiedPhosphoric Monoester HydrolasesBiosynthetic PathwaysBiochemistryMicroscopy FluorescenceMutationSeedsPollenGlycolysisThe Plant cell
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Variability in the cadherin gene in an Ostrinia nubilalis strain selected for Cry1Ab resistance

2008

Transgenic corn expressing Cry1Ab (a Bacillus thuringiensis toxin) is highly effective in the control of Ostrinia nubilalis. For its toxic action, Cry1Ab has to bind to specific insect midgut proteins. To date, in three Lepidoptera species resistance to a Cry1A toxin has been conferred by mutations in cadherin, a protein of the Lepidoptera midgut membrane. The implication of cadherin in the resistance of an Ostrinia nubilalis colony (Europe-R) selected with Bacillus thuringiensis Cry1Ab protoxin was investigated. Several major mutations in the cadherin (cdh) gene were found, which introduced premature termination codons and/or large deletions (ranging from 1383 to 1701bp). The contribution …

MutantDrug ResistanceGenetically modified cropsMothsBiologyBiochemistryOstriniaHemolysin ProteinsBacterial ProteinsBacillus thuringiensisBotanyGenetic variationAnimalsMolecular BiologyGeneGeneticsPolymorphism GeneticBacillus thuringiensis ToxinsCadherinfungiGenetic Variationfood and beveragesMidgutCadherinsbiology.organism_classificationEndotoxinsInsect ScienceMutationInsect ProteinsInsect Biochemistry and Molecular Biology
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