Search results for "NEUROSCIENCE"

showing 10 items of 8040 documents

Molecular signatures of silencing suppression degeneracy from a complex RNA virus

2021

As genomic architectures become more complex, they begin to accumulate degenerate and redundant elements. However, analyses of the molecular mechanisms underlying these genetic architecture features remain scarce, especially in compact but sufficiently complex genomes. In the present study, we followed a proteomic approach together with a computational network analysis to reveal molecular signatures of protein function degeneracy from a plant virus (as virus-host protein-protein interactions). We employed affinity purification coupled to mass spectrometry to detect several host factors interacting with two proteins of Citrus tristeza virus (p20 and p25) that are known to function as RNA sil…

0106 biological sciences0301 basic medicineProteomicsCitrusInteraction NetworksPathogenesisPlant Sciencemedicine.disease_causePathology and Laboratory Medicine01 natural sciencesInteractomeBiochemistryBimolecular fluorescence complementationRNA interferenceRNA silencing supressorsCitrus tristeza virusMedicine and Health SciencesDegeneracy (biology)Protein Interaction MapsBiology (General)H20 Plant diseasesPlant ProteinsEcologybiologyPlant virusesEukaryotaArgonautePlantsSmall interfering RNANucleic acidsRNA silencingComputational Theory and MathematicsGenetic interferenceExperimental Organism SystemsModeling and SimulationProteomeArgonaute ProteinsHost-Pathogen InteractionsRNA ViralEpigeneticsResearch ArticleClosterovirusRNA virusViral proteinQH301-705.5Arabidopsis ThalianaPlant PathogensComputational biologyGenome ViralBrassicaResearch and Analysis MethodsModels BiologicalPlant Viral Pathogens03 medical and health sciencesCellular and Molecular NeuroscienceViral ProteinsModel OrganismsPlant and Algal ModelsTobaccomedicineGeneticsGenomesNon-coding RNAProtein InteractionsMolecular signaturesMolecular BiologyEcology Evolution Behavior and SystematicsPlant DiseasesHost Microbial InteractionsBiology and life sciencesMass spectrometryOrganismsComputational BiologyProteinsRNA virusPlant Pathologybiology.organism_classificationGene regulationRepressor Proteins030104 developmental biologyU30 Research methodsAnimal StudiesRNAGene expression010606 plant biology & botanyF30 Plant genetics and breeding
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Neogene paleogeography provides context for understanding the origin and spatial distribution of cryptic diversity in a widespread Balkan freshwater …

2017

BackgroundThe Balkans are a major biodiversity and endemism hotspot, worldwide. Among the freshwater biota, amphipods are known for their high cryptic diversity. However, little is known about the temporal and paleogeographic aspects of their evolutionary history. We used paleogeography as a framework for understanding the onset of diversification inGammarus roeselii: (1) we hypothesised that, given the high number of isolated waterbodies in the Balkans, the species is characterised by high level of cryptic diversity, even on a local scale; (2) the long geological history of the region might promote pre-Pleistocene divergence between lineages; (3) given thatG. roeseliithrives both in lakes …

0106 biological sciences0301 basic medicineSpecies complexPleistoceneBiodiversityBayesian analysislcsh:Medicine[ SDV.BBM.BM ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesPhylogeneticsBalkan peninsulaEndemismMolecular Biology[ SDV.BID ] Life Sciences [q-bio]/BiodiversityPhylogenetic treeEcologyAncient lakesGeneral Neurosciencelcsh:RBiotaGeneral MedicineEvolutionary StudiesGammaridsPhylogeographyPhylogeography030104 developmental biologyBiogeographyAquaculture Fisheries and Fish ScienceGeneral Agricultural and Biological SciencesZoologyPeerJ
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Adaptation to environmental stress at different timescales

2020

Environments are changing rapidly, and to cope with these changes, organisms have to adapt. Adaptation can take many shapes and occur at different speeds, depending on the type of response, the trait, the population, and the environmental conditions. The biodiversity crisis that we are currently facing illustrates that numerous species and populations are not capable of adapting with sufficient speed to ongoing environmental changes. Here, we discuss current knowledge on the ability of animals and plants to adapt to environmental stress on different timescales, mainly focusing on thermal stress and ectotherms. We discuss within-generation responses that can be fast and induced within minute…

0106 biological sciences0301 basic medicineTime FactorsEnvironmental changeAcclimatizationClimate Changemedia_common.quotation_subjectPopulationBiodiversity010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEpigenesis Genetic03 medical and health sciencesHistory and Philosophy of ScienceStress PhysiologicalevolutionAnimalsHumansEcosystemeducationEcosystemPlant Physiological Phenomenamedia_commoneducation.field_of_studybusiness.industryGeneral NeuroscienceEnvironmental resource managementEnvironmental ExposurePlants15. Life on landAdaptation Physiologicalenvironmental stress030104 developmental biology13. Climate actionEctothermplasticityTraitEnvironmental sciencePsychological resilienceAdaptationbusinesstrangenerational effects
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A mechanistic underpinning for sigmoid dose-dependent infection

2016

0106 biological sciences0301 basic medicineUnderpinningenvironmentally transmitted diseasesDose dependenceSigmoid functionBiology010603 evolutionary biology01 natural sciencesinfektiot03 medical and health sciences030104 developmental biologytartuntatauditta1181infectionsNeuroscienceEcology Evolution Behavior and SystematicsOikos
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Kin and multilevel selection in social evolution: a never-ending controversy?

2016

Kin selection and multilevel selection are two major frameworks in evolutionary biology that aim at explaining the evolution of social behaviors. However, the relationship between these two theories has been plagued by controversy for almost half a century and debates about their relevance and usefulness in explaining social evolution seem to rekindle at regular intervals. Here, we first provide a concise introduction into the kin selection and multilevel selection theories and shed light onto the roots of the controversy surrounding them. We then review two major aspects of the current debate: the presumed formal equivalency of the two theories and the question whether group selection can …

0106 biological sciences0301 basic medicine[SDV]Life Sciences [q-bio]cooperationReviewKin selectionAltruism (biology)Biology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyBehavioral Ecology03 medical and health sciencesTheoretical Ecologycooperation; altruism; sociobiology; group selection; levels of selection; inclusive fitnessGeneral Pharmacology Toxicology and PharmaceuticsSelection (genetic algorithm)SociobiologyGeneral Immunology and Microbiology[SDV.BA]Life Sciences [q-bio]/Animal biologyinclusive fitnessInclusive fitnessArticlesGeneral Medicinelevels of selectionEpistemology[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoologygroup selection030104 developmental biologyGroup selectionaltruismEvolutionary EcologysociobiologySocial evolutionNeuroscienceSocial behaviorF1000Research
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Selection for multicomponent mimicry: equal feature salience and variation in preferred traits

2016

When should multiple traits on Batesian mimics be selected to resemble corresponding traits on model species? Here, we explore two possibilities. First, features of equal salience to predators may be used to categorize prey, selecting for multicomponent mimicry. Second, if different predators use single yet different traits to categorize prey, multicomponent mimicry may still be selected. We studied how blue tits categorized rewarding and unrewarding artificial prey items that are differentiated by a combination of two color dimensions. Many birds used both color dimensions to make decisions, and overall, the population selected for multicomponent mimicry. However, a subset of birds used on…

0106 biological sciences0301 basic medicineeducation.field_of_studylearningindividual variationEcologyPopulationMultiple traitsovershadowingBiology010603 evolutionary biology01 natural sciencesBatesian mimicryPredation03 medical and health sciences030104 developmental biologyCategorizationEvolutionary biologySalience (neuroscience)Mimicryta1181Animal Science and Zoologycomplex signaleducationEcology Evolution Behavior and SystematicsBehavioral Ecology
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2018

BackgroundThe insect cuticle covers the whole body and all appendages and has bi-directionnal selective permeability: it protects against environmental stress and pathogen infection and also helps to reduce water loss. The adult cuticle is often associated with a superficial layer of fatty acid-derived molecules such as waxes and long chain hydrocarbons that prevent rapid dehydration. The waterproofing properties of cuticular hydrocarbons (CHs) depend on their chain length and desaturation number.DrosophilaCH biosynthesis involves an enzymatic pathway including several elongase and desaturase enzymes.MethodsThe link between desiccation resistance and CH profile remains unclear, so we tested…

0106 biological sciences0301 basic medicinemedia_common.quotation_subjectCuticleArthropod cuticleInsect010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesmedicineDehydrationDrosophilaWater contentmedia_commonbiologyChemistryGeneral NeuroscienceGeneral Medicinebiology.organism_classificationmedicine.diseaseCell biology030104 developmental biologyDrosophila melanogasterGeneral Agricultural and Biological SciencesDesiccationPeerJ
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Foraging behaviour of an egg parasitoid exploiting plant volatiles induced by pentatomids : The role of adaxial and abaxial leaf surfaces

2017

Several phases of herbivorous insect attack including feeding and oviposition are known to induce plant defenses. Plants emit volatiles induced by herbivores to recruit insect parasitoids as an indirect defense strategy. So far, volatiles induced by herbivore walking and their putative role in the foraging behavior of egg parasitoids have not been investigated. In this paper we studied the response of the egg parasitoid Trissolcus basalis toward volatiles emitted by Vicia faba plants as consequence of the walking activity of the host Nezara viridula. Olfactometer bioassays were carried out to evaluate wasp responses to plants in which the abaxial or the adaxial surfaces were subjected to wa…

0106 biological sciences0301 basic medicinemedia_common.quotation_subjectLeaf surfaceOvipositionlcsh:MedicineInsectPlant ScienceChemical ecology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyParasitoid03 medical and health sciencesBotanyPlant defense against herbivoryWalking activityLaboratory of EntomologyTrissolcus basalisChemical ecology; Leaf surface; Nezara viridula; Oviposition; Trissolcus basalis; Walking activity; Neuroscience (all); Medicine (all); Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)media_commonHerbivoreNeuroscience (all)Biochemistry Genetics and Molecular Biology (all)biologyHost (biology)Medicine (all)General NeuroscienceChemical ecology; Leaf surface; Nezara viridula; Oviposition; Trissolcus basalis; Walking activitylcsh:RfungiNezara viridulafood and beveragesTrissolcus basaliGeneral Medicinebiology.organism_classificationLaboratorium voor EntomologieChemical ecology010602 entomologySettore AGR/11 - Entomologia Generale E Applicata030104 developmental biologyAgricultural and Biological Sciences (all)OlfactometerNezara viridulaEPSGeneral Agricultural and Biological SciencesEntomology017-4020PeerJ
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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

2019

Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus.…

0106 biological sciences0301 basic medicineretrograde signalingChloroplastsArabidopsisPlant BiologyMitochondrion01 natural sciencesElectron Transport Complex IIIGene Expression Regulation PlantArabidopsisOXIDATIVE STRESS-RESPONSETranscriptional regulationCYCLIC ELECTRON FLOWBiology (General)Nuclear proteinANAC transcription factors1183 Plant biology microbiology virologyreactive oxygen speciesbiologyChemistryRETROGRADE REGULATIONGeneral NeuroscienceQRNuclear Proteinsfood and beveragesGeneral MedicinePlants Genetically Modified:Science::Biological sciences [DRNTU]Cell biologyMitochondriaChloroplastviherhiukkasetMedicineSignal transductionmitochondrial functionsResearch ArticleSignal TransductionQH301-705.5SciencemitokondriotGenetics and Molecular BiologyGeneral Biochemistry Genetics and Molecular BiologyPROTEIN COMPLEXESSIGNALING PATHWAYS03 medical and health scienceschloroplastStress PhysiologicalALTERNATIVE OXIDASESkasvitENZYME-ACTIVITIESredox signalingTranscription factorarabidopsis RCD1General Immunology and MicrobiologybiokemiaArabidopsis Proteinsta1182Biology and Life Sciencesbiology.organism_classification030104 developmental biologyCELL-DEATHPLANT-MITOCHONDRIAA. thalianaGeneral BiochemistryRetrograde signalingGENES-ENCODING MITOCHONDRIALproteiinit010606 plant biology & botanyTranscription Factors
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Dendritic cell metabolism: moving beyond in vitro-culture-generated paradigms

2021

Dendritic cells (DCs) are key orchestrators of immunity and tolerance. It has become evident that DC function can be influenced by cellular metabolic programs. However, conclusions from early metabolic studies using in vitro GM-CSF DC cultures fail to correlate with bona fide DC populations. Here, we discuss the existing paradigms in the DC metabolism field, focusing on the limitations of the models utilized. Furthermore, we introduce alternative models to generate DCs in vitro that better emulate DCs found in vivo. Finally, we highlight new techniques to evaluate DC metabolism at the single-cell level. The combination of these two strategies could help advance the DC metabolism field towar…

0106 biological sciences0303 health sciencesBiomedical EngineeringCell DifferentiationBioengineeringDendritic CellsDendritic cellBiology01 natural sciencesIn vitro03 medical and health sciencesIn vivo010608 biotechnologyNeuroscienceFunction (biology)030304 developmental biologyBiotechnologyCurrent Opinion in Biotechnology
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