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showing 10 items of 24600 documents

Vindication of Ulota pygmaeothecia (Orthotrichaceae, Bryophyta)

2017

Ulota pygmaeothecia (Müll.Hal.) Kindb. and Ulota luteola (Hook.f. & Wilson) Wijk & Margad. are two epiphytic mosses from the evergreen Magellanic rainforests of southern South America. Both mosses have been considered as distinct species since their original description, with their specific status retained following the comprehensive review by Nicolajs Malta of South American Ulota (1927). Recently the synonymization of U. pygmaeothecia and U. luteola was proposed (Wang & Jia 2016), based mainly on the similarities stated in the protologues and the study of the available type specimens of U. pygmaeothecia and U. fulvella, as the type materials of U. luteola were lost in the mail…

0106 biological sciencesbiologyPlant ScienceRainforestEvergreenbiology.organism_classification010603 evolutionary biology01 natural sciencesTaxonSouth americanBotanyTaxonomy (biology)EpiphyteOrthotrichaceaeNomenclatureEcology Evolution Behavior and Systematics010606 plant biology & botanyPhytotaxa
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Two complex typifications and a new name to unravel Ulota germana sensu Malta non (Mont.) Mitt. (Orthotrichaceae)

2020

Ulota germana is an epiphytic moss moderately common in oceanic areas of Patagonia (southern South America), one of the regions of the world where Ulota reaches a peak of diversity. It is easily recognized by very long perichaetial leaves, which reach the capsule when wet, an endostome of eight segments and verrucose spores. In Nikolajs Malta's revision of South American Ulota, a species was described under this name with apparently similar long perichaetial leaves and spores but with a 16-segment endostome, an uncommon character in this genus. No further references to this particular combination of traits are found throughout the literature of South American Ulota. In the same work, Malta …

0106 biological sciencesbiologyPlant Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesMossGeographySensuSouth americanBotanyTypificationTaxonomy (biology)EpiphyteOrthotrichaceaeNomenclatureEcology Evolution Behavior and Systematics010606 plant biology & botanyThe Bryologist
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Spray-Drying Performance and Thermal Stability of L-Ascorbic Acid Microencapsulated with Sodium Alginate and Gum Arabic

2019

[EN] The potential of sodium alginate (ALG) and gum arabic (GA) as wall polymers for Lascorbic acid (AA) encapsulation as a tool for their preservation against the thermo-oxidative degradation was investigated. The influence of such polymers used as wall material on the AAcontent, size, encapsulation efficiency, encapsulation yield and thermo-oxidative stability were evaluated. The AA-microparticles were obtained using the spray-drying technique. An experimental Taguchi design was employed to assess the influence of the variables in the encapsulation process. The microparticles morphology and size distribution were characterized by scanning electron microscopy and laser diffraction. The the…

0106 biological sciencesfood.ingredientMaterials scienceChemical PhenomenaScanning electron microscopeAlginatesDrug Compoundinggum arabicPharmaceutical ScienceAscorbic AcidL-ascorbic acid01 natural sciencesArticleAnalytical Chemistrysodium alginatelcsh:QD241-4410404 agricultural biotechnologyfoodDifferential scanning calorimetryDrug Stabilitylcsh:Organic chemistry010608 biotechnologyDrug DiscoveryThermal stabilityspray-dryingPhysical and Theoretical ChemistryParticle Sizechemistry.chemical_classificationAnalysis of VarianceMolecular StructurenanotechnologySpectrum AnalysisOrganic ChemistryTemperature04 agricultural and veterinary sciencesPolymerAscorbic acid040401 food scienceThermogravimetrychemistryChemical engineeringChemistry (miscellaneous)Spray dryingMAQUINAS Y MOTORES TERMICOSMolecular MedicineGum arabicencapsulation
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List of true bug taxa described by Rauno E. Linnavuori (Hemiptera: Heteroptera)

2017

Abstract A list of 96 available genus-group taxa, 1459 available species-group taxa and 5 unavailable infrasubspecific taxa of Heteroptera described by Rauno E. Linnavuori is compiled. One new substitute name, Phytocoris (Eriamiris) rostriformis nom. nov., is proposed to replace the junior homonym Phytocoris rostratus Linnavuori, 2000b (Miridae). Taylorilygus nairobiensis nigricollis Linnavuori, 1974a is recognized as an available name and senior objective synonym of Taylorilygus nairobiensis atricollis Linnavuori, 1975f, syn. nov. (Miridae). Lectotype of Taylorilygus nairobiensis nigricollis is designated. Two new combinations are proposed: Chinavia amosi (Linnavuori, 1982) comb. nov. and …

0106 biological sciencesfood.ingredientPhytocorisSciocorisHeteroptera010607 zoologyTaylorilygusZoologyOrthotylusBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesMiridaefoodInsect ScienceTaxonomy (biology)NomenclatureEntomologica Americana
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A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning

2020

ABSTRACT Background Diploid genome assembly is typically impeded by heterozygosity because it introduces errors when haplotypes are collapsed into a consensus sequence. Trio binning offers an innovative solution that exploits heterozygosity for assembly. Short, parental reads are used to assign parental origin to long reads from their F1 offspring before assembly, enabling complete haplotype resolution. Trio binning could therefore provide an effective strategy for assembling highly heterozygous genomes, which are traditionally problematic, such as insect genomes. This includes the wood tiger moth (Arctia plantaginis), which is an evolutionary study system for warning colour polymorphism. F…

0106 biological scienceshaplotypepopulation genomicsAcademicSubjects/SCI02254PopulationSequence assemblyHealth Informaticswood tiger moth; Arctia plantaginisMothsBiologyData Notegenotyyppi010603 evolutionary biology01 natural sciencesGenometäpläsiilikäsPopulation genomicsLoss of heterozygosity03 medical and health sciencesConsensus sequenceAnimalsHumanseducation030304 developmental biology0303 health scienceseducation.field_of_studyGenetic diversityGenometrio binningHaplotypewood tiger mothKaryotypegenomiikkaGenomicsWoodComputer Science ApplicationsLepidopteraHaplotypesannotationpopulaatiogenetiikkaEvolutionary biologyperimägenome assemblyAcademicSubjects/SCI00960Corrigendum
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Novel subpopulations in date palm (Phoenix dactylifera) identified by population-wide organellar genome sequencing

2019

Background The date palm is one of the oldest cultivated fruit trees. The tree can withstand high temperatures and low water and the fruit can be stored dry offering nutrition across the year. The first region of cultivation is believed to be near modern day Iraq, however, where and if the date palm was domesticated is still a topic of debate. Recent studies of chloroplast and genomic DNA revealed two major subpopulations of cultivars centered in both the Eastern range of date palm cultivation including Arabian Peninsula, Iraq and parts of South Asia, and the Western range, including North Africa. Results To better understand the origins of date palm cultivation we sequenced and analyzed ov…

0106 biological scienceslcsh:QH426-470Range (biology)Cultivationlcsh:BiotechnologyeducationPopulationGenomicsBiologyDate palm01 natural sciencesGenomeDomestication03 medical and health scienceslcsh:TP248.13-248.65Organellar genome sequencingBotanyGeneticseducationDomestication030304 developmental biologyOrganelles0303 health scienceseducation.field_of_studyBase SequenceWhole Genome SequencingHaplotypePhoeniceaefood and beverageslcsh:GeneticsHaplotypesPhoenix dactyliferaPalmResearch Article010606 plant biology & botanyBiotechnologyBMC Genomics
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Host plant variation plastically impacts different traits of the immune system of a phytophagous insect

2011

Summary 1. Host plant quality affects herbivorous insect performance and consequently their susceptibility to natural enemies. Recently, it has been hypothesized that the immune function of herbivorous insects can be altered by their host plant, thus generating variation in their susceptibility to entomopathogens. Previous studies testing this hypothesis provided contradictory outcomes, mainly as a result of the differences in methodology such as measuring a single-immune parameter rather than considering trade-off-mediated interactions between immune defence systems of the insect. Here, we hypothesized that plant-mediated changes in insect immunity could result from the alteration of physi…

0106 biological sciencesmedia_common.quotation_subjectAntimicrobial peptidesZoologychemical and pharmacologic phenomenaInsectPlant disease resistance010603 evolutionary biology01 natural sciences03 medical and health sciencesImmune systemImmunityBotanyHemolymphEcology Evolution Behavior and Systematics030304 developmental biologymedia_common2. Zero hunger0303 health sciencesEupoecilia ambiguellabiologyfungiProphenoloxidasebiochemical phenomena metabolism and nutritionbiology.organism_classificationbacteriaFunctional Ecology
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A high-quality genome assembly from short and long reads for the non-biting midge Chironomus riparius (Diptera)

2020

AbstractBackgroundChironomus riparius is of great importance as a study species in various fields like ecotoxicology, molecular genetics, developmental biology and ecology. However, only a fragmented draft genome exists to date, hindering the recent rush of population genomic studies in this species.FindingsMaking use of 50 NGS datasets, we present a hybrid genome assembly from short and long sequence reads that make C. riparius’ genome one of the most contiguous Dipteran genomes published, the first complete mitochondrial genome of the species and the respective recombination rate as one of the first insect recombination rates at all.ConclusionsThe genome and associated resources will be h…

0106 biological sciencesmedicine.medical_specialtyMitochondrial DNAEcology (disciplines)ved/biology.organism_classification_rank.speciesPopulationSequence assemblyHybrid genome assemblyQH426-470Biology010603 evolutionary biology01 natural sciencesGenomeChironomidae03 medical and health sciencesMolecular geneticschironomus ripariusGeneticsmedicineAnimalseducationMolecular BiologyGenetics (clinical)030304 developmental biologyrecombination rateChironomus riparius0303 health scienceseducation.field_of_studyGenomehybrid genome assemblyved/biologyGenome ReportEvolutionary biology
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Multivariate morphometric analysis of the Stipa turkestanica group (Poaceae: Stipa sect. Stipa)

2015

Based on numerical analyses of macromorphological characters (cluster analysis, principal coordinate analysis and principal component analysis), scanning electron microscopy observation of lemma and lamina micromorphology, as well as field observations, five taxa belonging to the Stipa turkestanica group have been recognized in the mountain area of Central Asia. They are S. turkestanica subsp. turkestanica, S. turkestanica subsp. trichoides, S. macroglossa subsp. macroglossa, S. macroglossa subsp. kazachstanica and S. kirghisorum. As a result of this study, we propose one new combination, S. macroglossa var. pubescens, and designate lectotypes for S. turkestanica subsp. trichoides and S. ma…

0106 biological sciencesnumerical analysisStipa turkestanicaIdentification keyPlant Sciencemicromorphology010603 evolutionary biology01 natural sciencesLemma (botany)identification keyBotanydistributionTypificationтаксоныStipeaeNomenclatureEcology Evolution Behavior and SystematicsMiddle Asiabiologybiology.organism_classificationStipeaeTaxonnomenclatureStipaковылевыеtypificationDistribution ; Identification key ; Micromorphology ; Middle Asia ; Nomenclature ; Numerical analysis ; Stipeae ; Typification010606 plant biology & botanyPlant Systematics and Evolution
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Extending Joint Models in Community Ecology : A Response to Beissinger et al.

2016

The joint modelling of many variables in community ecology is a new and technically challenging area with many opportunities for future developments. The possibility of extending joint models to deal with imperfect detection has been highlighted by Beissinger et al. as an important problem worthy of further investigation [1]. We agree, and previously pointed to this potential extension as an outstanding question [2], alongside models that can estimate phylogenetic repulsion or attraction, nonlinearity in the response to latent variables, and spatial or temporal correlation, because further developments in all these directions are needed.

0106 biological sciencesta112CommunityComputer science010604 marine biology & hydrobiologyjoint modelsLatent variableTemporal correlation010603 evolutionary biology01 natural sciencesExtension (metaphysics)EconometricsImperfectJoint (geology)Ecology Evolution Behavior and Systematicscommunity ecologyTrends in Ecology and Evolution
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