Search results for "Novosphingobium"

showing 3 items of 3 documents

Novosphingobium lentum sp. nov., a psychrotolerant bacterium from a polychlorophenol bioremediation process

2005

A polychlorophenol-degrading strain, designated MT1T, and three MT1-like strains, MT101, MT103 and MT104, were isolated from a cold (4–8 °C) fluidized-bed process treating chlorophenol-contaminated groundwater in southern Finland. The organisms were Gram-negative, rod-shaped, catalase-positive, non-spore-forming and non-motile. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the strains belonged to the α-4 subclass of the Proteobacteria and were members of the genus Novosphingobium. The highest 16S rRNA gene sequence similarity observed for these strains was 96·5 % with the type strains of Novosphingobium hassiacum, Novosphingobium aromaticivorans and Novosphingobium s…

DNA BacterialNovosphingobiumSequence analysisMolecular Sequence DataFresh WaterNovosphingobium lentummedicine.disease_causeDNA RibosomalMicrobiologyMicrobiologyNovosphingobium hassiacumRNA Ribosomal 16SmedicineFinlandPhylogenyEcology Evolution Behavior and SystematicsbiologyFatty AcidsGenes rRNASequence Analysis DNAGeneral MedicineRibosomal RNAbiology.organism_classification16S ribosomal RNABacterial Typing TechniquesCold TemperatureSphingomonadaceaeSphingomonadaceaeBiodegradation EnvironmentalProteobacteriaWater Pollutants ChemicalChlorophenolsInternational Journal of Systematic and Evolutionary Microbiology
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Complete sequencing of Novosphingobium sp. PP1Y reveals a biotechnologically meaningful metabolic pattern.

2014

Background Novosphingobium sp. strain PP1Y is a marine α-proteobacterium adapted to grow at the water/fuel oil interface. It exploits the aromatic fraction of fuel oils as a carbon and energy source. PP1Y is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. Here, we report the complete functional annotation of the whole Novosphingobium genome. Results PP1Y genome analysis and its comparison with other Sphingomonadal genomes has yielded novel insights into the molecular basis of PP1Y’s phenotypic traits, such as its peculiar ability to encapsulate and degrade the aromatic fraction of fuel oils. In particular, we have identified and dissected several highly …

NovosphingobiumSphingomonadDe novo sequencing; Novosphingobium sp. PP1Y; Sphingomonads; Aromatic pollutant compounds/bioremediationAromatic pollutant compoundComputational biologyNovosphingobium sp. PP1YAromatic pollutant compounds/bioremediationGenomeSphingomonadsDNA sequencingDe novo sequencingbioremediationNext generation sequencingGeneticsPhylogenyWhole genome sequencingGeneticschemistry.chemical_classificationbiologyHigh-Throughput Nucleotide SequencingQuorum SensingSequence Analysis DNAbiology.organism_classificationSphingomonadaceaeSphingomonadaceaeQuorum sensingBiodegradation EnvironmentalchemistryGenes BacterialEnergy sourceAromatic hydrocarbonMetabolic Networks and PathwaysResearch ArticleBiotechnology
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High-Quality Whole-Genome Sequence of an Estradiol-Degrading Strain, Novosphingobium tardaugens NBRC 16725

2019

In this work we report the complete sequence and assembly of the estradiol-degrading bacterium Novosphingobium tardaugens NBRC 16725 genome into a single contig using the Pacific Biosciences RS II system.

Sewage-treatment plant010501 environmental sciencesBiologymedicine.disease_cause01 natural sciencesGenomeDegradation03 medical and health sciencesComplete sequenceImmunology and Microbiology (miscellaneous)GeneticsmedicineMolecular Biology030304 developmental biology0105 earth and related environmental sciencesGeneticsWhole genome sequencing0303 health sciencesBacteriaStrain (chemistry)ContigGenome Sequencesfood and beveragesbiology.organism_classificationNovosphingobium tardaugensActivated-sludgePacific biosciencesBacteriaMicrobiology Resource Announcements
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