Search results for "OMICS"
showing 10 items of 17130 documents
The efficacy of whole human genome capture on ancient dental calculus and dentin
2019
Objectives Dental calculus is among the richest known sources of ancient DNA in the archaeological record. Although most DNA within calculus is microbial, it has been shown to contain sufficient human DNA for the targeted retrieval of whole mitochondrial genomes. Here, we explore whether calculus is also a viable substrate for whole human genome recovery using targeted enrichment techniques. Materials and methods Total DNA extracted from 24 paired archaeological human dentin and calculus samples was subjected to whole human genome enrichment using in-solution hybridization capture and high-throughput sequencing. Results Total DNA from calculus exceeded that of dentin in all cases, and altho…
Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…
2020
Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…
Four Perspectives of Applied Sustainability: Research Implications and Possible Integrations
2017
How is applied sustainability being understood and implemented in academics’ and practitioners’ circles? Participants to the workshop “Sustainability Performance Assessment” within the ICCSA 2017 conference are confronted with this overarching question, which they address from their specific backgrounds and theoretical standpoints.
At the intersection of cultural and natural heritage: Distribution and conservation of the type localities of Italian endemic vascular plants
2017
Abstract We conducted a GIS spatial analysis with the aim of providing the first quantitative large-scale overview of the distribution patterns of 1536 type localities ( loci classici ) of 1216 Italian endemic vascular plants and their relationship with a set of descriptive variables. Whereas some variables were used to model the presence-absence distribution patterns of the type localities for the whole set of endemics as well as for the subset of narrow endemics, others (e.g., presence inside or outside protected areas and Italian Important Plant Areas) were considered with the purpose of assessing potential assets or risks for conservation. The largest number of type localities was found…
Synthetic cartography for mapping biodiversity in the Mediterranean region: Sicily as a case study
2018
This paper proposes a new hierarchical land classification system for the mapping of species distribution at national or regional scales. Our integrative framework incorporates two hierarchical levels inferred from historical, climatic, geomorphological and geological attributes. The feasibility of this proposal is based on the use of historical collections and literature data, as well as on its ability to combine old low-precision data with more recent records of higher resolution. The system is set up for vascular plants, but it can also be used for other taxonomic groups. Furthermore, it has the potential for application to the whole Mediterranean region because it is based on informatio…
The analysis of convergence in ecological indicators: An application to the Mediterranean fisheries
2017
9 pages, 4 figures, 3 tables
Seascape connectivity of European anchovy in the Central Mediterranean Sea revealed by weighted Lagrangian backtracking and bio-energetic modelling
2020
AbstractEcological connectivity is one of the most important processes that shape marine populations and ecosystems, determining their distribution, persistence, and productivity. Here we use the synergy of Lagrangian back-trajectories, otolith-derived ages of larvae, and satellite-based chlorophyll-a to identify spawning areas of European anchovy from ichthyoplanktonic data, collected in the Strait of Sicily (Central Mediterranean Sea), i.e., the crucial channel in between the European and African continents. We obtain new evidence of ecosystem connectivity between North Africa and recruitment regions off the southern European coasts. We assess this result by using bio-energetic modeling, …
A ricardian analysis of the impact of climate change on permanent crops in a mediterranean region
2019
This is the first study which explores the impact of climate change in Sicily, a small Mediterranean region of Southern Europe. According to research, Mediterranean area has shown large climate shifts in the last century and it has been identified as one of the most prominent “Hot-Spots” in future climate change projections. Since agriculture is an economic activity which strongly depends on climate setting and is particularly responsive to climate changes, it is important to understand how such changes may affect agricultural profitability in the Mediterranean region. The aim of the present study is to assess the expected impact of climate change on permanent crops cultivated in Sicilian r…
Mosses of the Mediterranean, an Annotated Checklist
2013
Abstract The names of all mosses published up to the end of August 2011 in the countries of the Mediterranean basin, the Macaronesian Islands and Bulgaria are compiled in an annotated checklist. The list comprises accepted names and synonyms, and provides explanatory annotations for ambiguous and disputed names. Literature references supporting the reports in each individual area are given only for taxa reported once or in a single locality. A total of 1168 accepted species and 81 infraspecific taxa are reported from the whole area.
Jellyfish blooms perception in Mediterranean finfish aquaculture
2017
7 pages, 5 figures, 3 tables, supplemental material https://doi.org/10.1016/j.marpol.2016.11.005