Search results for "OMICS"

showing 10 items of 17130 documents

Plant proteome analysis

2004

Proteome analysis is becoming a powerful tool in the functional characterization of plants. Due to the availability of vast nucleotide sequence information and based on the progress achieved in sensitive and rapid protein identification by mass spectrometry, proteome approaches open up new perspectives to analyze the complex functions of model plants and crop species at different levels. In this review, an overview is given on proteome studies performed to analyze whole plants or specific tissues with particular emphasis on important physiological processes such as germination. The chapter on subcellular proteome analysis of plants focuses on the progress achieved for plastids and mitochond…

0106 biological sciencesProteomeGerminationComputational biologyBiologyProteomicsCrop species01 natural sciencesBiochemistryMass Spectrometry03 medical and health sciencesBotany[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyElectrophoresis Gel Two-Dimensional[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyPlastidSymbiosisMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant Proteins2. Zero hungerTree physiology0303 health sciencesfungifood and beveragesPlantsProteomeProtein identification010606 plant biology & botany
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Quantitative proteomics reveals a dynamic association of proteins to detergent-resistant membranes upon elicitor signaling in tobacco.

2009

International audience; A large body of evidence from the past decade supports the existence, in membrane from animal and yeast cells, of functional microdomains playing important roles in protein sorting, signal transduction, or infection by pathogens. In plants, as previously observed for animal microdomains, detergent-resistant fractions, enriched in sphingolipids and sterols, were isolated from plasma membrane. A characterization of their proteic content revealed their enrichment in proteins involved in signaling and response to biotic and abiotic stress and cell trafficking suggesting that these domains were likely to be involved in such physiological processes. In the present study, w…

0106 biological sciencesProteomicsGTPase-activating proteinQuantitative proteomicsDetergentsPlasma protein bindingBiologymedicine.disease_causeProteomics01 natural sciencesBiochemistryMass SpectrometryAnalytical ChemistryCell membraneFungal Proteins03 medical and health sciencesProtein targetingTobaccomedicine[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular Biology030304 developmental biologyPlant Proteins0303 health sciencesFungal proteinStaining and LabelingResearchAlgal ProteinsCell MembraneCell biologymedicine.anatomical_structureBiochemistryLuminescent MeasurementsSignal transductionPeptidesReactive Oxygen Species010606 plant biology & botanyProtein BindingSignal TransductionMolecularcellular proteomics : MCP
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Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
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Plant-phenotypic changes induced by parasitoid ichnoviruses enhance the performance of both unparasitized and parasitized caterpillars

2021

Early Access; International audience; There is increasing awareness that interactions between plants and insects can be mediated by microbial symbionts. Nonetheless, evidence showing that symbionts associated with organisms beyond the second trophic level affect plant-insect interactions are restricted to a few cases belonging to parasitoid-associated bracoviruses. Insect parasitoids harbor a wide array of symbionts which, like bracoviruses, can be injected into their herbivorous hosts to manipulate their physiology and behavior. Yet, the function of these symbionts in plant-based trophic webs remains largely overlooked. Here we provide the first evidence of a parasitoid-associated symbiont…

0106 biological sciencesProteomics[SDV]Life Sciences [q-bio]Waspsplant-mediated species interactionsInsect01 natural sciencesParasitoidLaboratory of Entomologymedia_commonTrophic levelparasitoid-associated symbiont2. Zero hunger[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesparasitoid‐associated symbiontsbiologyfood and beveragesPE&RChost-parasitoid interaction[SDV] Life Sciences [q-bio][SDV.EE] Life Sciences [q-bio]/Ecology environmentLarvapolydnaviruseOriginal Articleplant‐mediated species interactionsBracovirusfood.ingredientmedia_common.quotation_subjectZoologyContext (language use)Ecological Interactions010603 evolutionary biologyplant-herbivore-microbe interactionsHost-Parasite Interactions03 medical and health sciencesfoodplant-herbivore-microbe interactionGeneticsAnimalsHerbivoryCaterpillarplant‐herbivore‐microbe interactionsEcology Evolution Behavior and Systematics030304 developmental biologyHerbivorefungiOriginal Articlesbiology.organism_classificationLaboratorium voor EntomologiepolydnavirusesPolydnaviridaeparasitoid-associated symbiontsIchnovirusEPShost‐parasitoid interactionplant-mediated species interaction
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Taxonomic investigations on Psoralea palaestina (Fabaceae), a critical species of Mediterranean flora

2016

Psoralea palaestina is a critical and unappreciated species described from Palestinian territories, and currently treated as synonym of P. bituminosa, nowadays known as Bituminaria bituminosa. Nomenclatural investigations allowed to ascertain that it was validly described for the first time by Bassi (1768) and not by Gouan (1773), as previously thought. Extensive taxonomic investigations revealed that this very peculiar legume is morphologically well differentiated from the other allied known species. Therefore, it has to be properly treated at specific level and transferred to the genus Bituminaria, thus proposing a new combination: Bituminaria palaestina. Based on literature, herbarium an…

0106 biological sciencesPsoraleeaeChorologyPlant Science010603 evolutionary biology01 natural sciencesBituminariaMiddle EastBituminaria; Endemic flora; Fodder grass; Middle East; Nomenclature; Psoraleeae; TaxonomyBituminaria endemic flora fodder grass Middle East nomenclature Psoraleeae taxonomy0502 economics and businessBotanyPsoraleeaeEudicotsEcology Evolution Behavior and SystematicsTaxonomybiologyNomenclatureSettore BIO/02 - Botanica SistematicaFodder grass05 social sciencesEndemic floraFabaceaebiology.organism_classificationBituminariaHerbariumBituminaria bituminosaTaxonomy (biology)050203 business & managementPhytotaxa
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Active Wild Food Practices among Culturally Diverse Groups in the 21st Century across Latgale, Latvia

2021

Simple Summary A study in the bordering region of Latvia took place in order to investigate wild plant food uses. In total 72 interviewees reported food uses. The most represented uses of recorded plants were recreational tea; for jam; as snacks and soup; and drink. Interviewees also reported loss of foraging practice due to the habitat change as for example in case of caraway and chamomile. The results indicated that part of the reason for the main use of wild plants were linked to diet diversification. Abstract Local ecological knowledge (LEK), including but not limited to the use of wild food plants, plays a large role in sustainable natural resource management schemes, primarily due to …

0106 biological sciencesQH301-705.5BiodiversityContext (language use)Diversification (marketing strategy)Biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyArticleSettore BIO/01 - Botanica GeneraleforagingCultural diversityBiology (General)Natural resource managementSocioeconomicsnatural resourcesRecreationGeneral Immunology and Microbiologyfood and beverageswild food plantslocal ecological knowledgeNatural resourceLatvia0104 chemical sciencesLocal community010404 medicinal & biomolecular chemistryGeneral Agricultural and Biological SciencesForaging; Latvia; Local ecological knowledge; Natural resources; Wild food plants010606 plant biology & botanyBiology
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Dealing with physical barriers in bottlenose dolphin (Tursiops truncatus) distribution

2019

Abstract Worldwide, cetacean species have started to be protected, but they are still very vulnerable to accidental damage from an expanding range of human activities at sea. To properly manage these potential threats we need a detailed understanding of the seasonal distributions of these highly mobile populations. To achieve this goal, a growing effort has been underway to develop species distribution models (SDMs) that correctly describe and predict preferred species areas. However, accuracy is not always easy to achieve when physical barriers, such as islands, are present. Indeed, SDMs assume, if only implicitly, that the spatial effect is stationary, and that correlation is only depende…

0106 biological sciencesRange (biology)Bayesian probabilitySpecies distributionDistribution (economics)Sede Central IEO010603 evolutionary biology01 natural sciencesINLAPesqueríasArchipelago de La MaddalenaSPDEgeographyCetaceansgeography.geographical_feature_categorybiologybusiness.industry010604 marine biology & hydrobiologyEcological ModelingEnvironmental resource managementBottlenose dolphinbiology.organism_classificationPhysical BarrierHabitatArchipelagoHierarchical Bayesian spatial modelsbusinessEcological Modelling
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Current and future suitability of wintering grounds for a long-distance migratory raptor

2017

Conservation of migratory species faces the challenge of understanding the ecological requirements of individuals living in two geographically separated regions. In some cases, the entire population of widely distributed species congregates at relatively small wintering areas and hence, these areas become a priority for the species’ conservation. Satellite telemetry allows fine tracking of animal movements and distribution in those less known, often remote areas. Through integrating satellite and GPS data from five separated populations comprising most of the breeding range, we created a wide habitat suitability model for the Eleonora’s falcon on its wintering grounds in Madagascar. On this…

0106 biological sciencesRange (biology)SciencePopulationClimate changeDistribution (economics)Suitability010603 evolutionary biology01 natural sciencesArticleFalco eleonoraesatellite telemetryddc:570Zoologiawintering groundsMadagascarAnimalsEcosystemZoología14. Life underwatereducationEcosystemEntire populationeducation.field_of_studyMultidisciplinaryGeographyRaptorsEcologybusiness.industryspecies distribution model010604 marine biology & hydrobiologyQRLong-distance15. Life on landBiodiversitatCurrent (stream)GeographyHabitatMigratory raptorMedicineWintering groundsAnimal MigrationSeasonsbusiness
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New Mitochondrial Gene Rearrangement in Psyttalia concolor, P. humilis and P. lounsburyi (Hymenoptera: Braconidae), Three Parasitoid Species of Econo…

2020

The family Braconidae consists mostly of specialized parasitoids, some of which hold potential in biocontrol of agricultural pests. Psyttalia concolor, Psyttalia humilis and Psyttalia lounsburyi are parasitoids associated with Bactrocera oleae, a major pest of cultivated olives. The native range of Psyttalia concolor is the Mediterranean, and P. humilis and P. lounsburyi are native to sub-Saharan Africa. This study reports the mitochondrial genomes of the three species, thus laying the foundation for mitogenomic analyses in the genus Psyttalia. Comparative mitogenomics within Braconidae showed a novel gene arrangement in Psyttalia in involving translocation and inversion of transfer RNA gen…

0106 biological sciencesRange (biology)ZoologyHymenopteraphylogeny010603 evolutionary biology01 natural sciencesbraconidaeoliveParasitoid<i>Psyttalia humilis</i>03 medical and health sciencesPhylogeneticsGenusSettore AGR/07 - Genetica AgrariaBactroceralcsh:Science030304 developmental biology0303 health sciencesmitogenomicsbiologycyclostome waspsbiology.organism_classification<i>Psyttalia lounsburyi</i>cyclostome wasps mitogenomics olive phylogeny braconidae opiinae Psyttalia humilis Psyttalia lounsburyiSettore AGR/11 - Entomologia Generale E ApplicataopiinaeInsect Sciencelcsh:QPEST analysisBraconidaeInsects
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No fear of bankruptcy: the innate self-subsidizing forces in recreational fishing

2019

Abstract Recreational fishing, by both local residents and tourists, is a popular activity globally. The behaviour and motivation of recreational fishers is different from those of commercial fishers. Unlike the latter, the former are not dependent on making profits to continue fishing. Rather, the value of recreational fishing to those who engage in it is a combination of catches and experience values. The latter value implies that recreational fishers might continue fishing when they should not, analogous to the effect of subsidy in the commercial fishing sector. Hence, the term “self-subsidizing”: a fishery as one in which fishers subsidize themselves through an economic investment in ge…

0106 biological sciencesRecreational fishingEcologyPublic economicsBankruptcy010604 marine biology & hydrobiologySubsidyBusinessAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesEcology Evolution Behavior and SystematicsICES Journal of Marine Science
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