Search results for "ORGANISMS"

showing 10 items of 726 documents

EXTENDED VALIDATION OF DYNAMIC IRREVERSIBLE THERMOPORATION: A NOVEL THERMAL PROCESS FOR MICROBIAL INACTIVATION

2017

A novel thermal treatment for microorganism inactivation, characterized by a very rapid temperature increase (up to 30C/s) and a low final temperature (up to 65C) maintained for a relatively short holding time, has been recently presented and tested by the authors, showing microbial load reduction greater than 5 log units against several common bacteria and yeasts. With the aim of extending the possible use of the new thermal treatment to a wider microorganisms class, in this work the dynamic irreversible thermoporation (DIT) treatment was further tested on a well-known thermoresistant strain, the Enterococcus hirae: The results of these new experimental tests confirmed the reliability of t…

Settore ING-IND/08 - Macchine A FluidoSettore MED/42 - Igiene Generale E ApplicataSettore ING-IND/13 - Meccanica Applicata Alle MacchineMicroorganisms inactivation thermal treatment beverages Enterococcus hirae SEM analysis
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Disentangling conditional effects of multiple regime shifts on Atlantic cod productivity

2020

AbstractRegime shifts are increasingly prevalent in the ecological literature. However, definitions vary, and many detection methods are subjective. Here, we employ an operationally objective means of identifying regime shifts, using a Bayesian online change-point detection algorithm able to simultaneously identify shifts in the mean and(or) variance of time series data. We detected multiple regime shifts in long-term (59-154 years) patterns of coastal Norwegian Atlantic cod (>70% decline) and putative drivers of cod productivity: North Atlantic Oscillation (NAO); sea-surface temperature; zooplankton abundance; fishing mortality (F). The consequences of an environmental or climate-relate…

Sexual Reproduction0106 biological sciencesliikakalastusClimatePopulation DynamicsMarine and Aquatic SciencesAquacultureOceanography01 natural sciencesturskaAbundance (ecology)Regime shiftAtlantic OceanMultidisciplinarybiologyQTemperatureREukaryotaAgriculturePlanktonOceanographyGadus morhuaProductivity (ecology)OsteichthyesVertebratesPhysical SciencesMedicineResearch ArticleSpawningDeath RatesFish BiologyympäristötekijätClimate ChangeScienceFishingModes of ReproductionFisheriesClimate changeCod010603 evolutionary biologyZooplanktonZooplanktonPopulation MetricsAnimalsMarine ecosystem14. Life underwaterOcean TemperatureEcosystemPopulation Biologybayesilainen menetelmäkalakannat010604 marine biology & hydrobiologyOrganismsBiology and Life SciencesBayes TheoremilmastonmuutoksetProbability TheoryProbability Distributionbiology.organism_classificationInvertebratesaikasarja-analyysiFishNorth Atlantic oscillationEarth ScienceskannanvaihtelutEnvironmental scienceAtlantic codZoologyMathematicsDevelopmental BiologyVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480PLOS ONE
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Recent benthic foraminiferal assemblages and their relationship to environmental variables on the shoreface and inner shelf off Valencia (Western Med…

2014

The environmental variables that determine the distributions of benthic foraminiferal assemblages on the shoreface and inner shelf of the north of Valencia province (Western Mediterranean) are identified. The possible influence of variables such as water depth, distance from shore, hydrodynamics, substrate type, carbonate content, organic matter content and human activity is evaluated. Multivariate cluster-Q-type analysis and redundancy analysis (RDA) are used to identify the environmental variables that have the greatest influence on the assemblage distribution. The spatial distribution of the assemblages is closely associated with water depth and substrate. The diversity and abundance of …

ShoreMediterranean climateAquatic OrganismsGeologic Sedimentsgeographygeography.geographical_feature_categorybiologyPopulation DynamicsForaminiferaGeneral MedicineAquatic ScienceOceanographySpatial distributionbiology.organism_classificationPollutionSubstrate (marine biology)ForaminiferaOceanographyMediterranean seaCommon speciesBenthic zoneMediterranean SeaEnvironmental scienceEcosystemEnvironmental MonitoringMarine Environmental Research
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Incidence of DAA failure and the clinical impact of retreatment in real-life patients treated in the advanced stage of liver disease: Interim evaluat…

2017

Background: Few data are available on the virological and clinical outcomes of advanced liver disease patients retreated after first-line DAA failure. Aim: To evaluate DAA failure incidence and the retreatment clinical impact in patients treated in the advanced liver disease stage. Methods: Data on HCV genotype, liver disease severity, and first and second line DAA regimens were prospectively collected in consecutive patients who reached the 12-week post-treatment and retreatment evaluations from January 2015 to December 2016 in 23 of the PITER network centers. Results: Among 3,830 patients with advanced fibrosis (F3) or cirrhosis, 139 (3.6%) failed to achieve SVR. Genotype 3, bilirubin lev…

SimeprevirMaleGenetics and Molecular Biology (all)HepacivirusPediatricsGastroenterologyBiochemistry0302 clinical medicineAnimal Cells80 and overBileMedicinePublic and Occupational HealthProspective Studieslcsh:ScienceAged 80 and overAdult; Aged; Aged 80 and over; Antiviral Agents; Drug Therapy Combination; Female; Hepatitis C; Humans; Incidence; Liver Diseases; Male; Middle Aged; Prospective Studies; Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)Liver DiseaseIncidenceLiver DiseasesChild HealthBloodCirrhosisPhysical SciencesRegression Analysis030211 gastroenterology & hepatologyDrug Therapy CombinationCellular TypesStatistics (Mathematics)Humanmedicine.medical_specialtyGastroenterology and HepatologyMicrobiologyAntiviral Agents03 medical and health sciencesDrug TherapyHumansStatistical MethodsAgedBlood CellsBiochemistry Genetics and Molecular Biology (all)Flaviviruseslcsh:ROrganismsBiology and Life Sciencesmedicine.diseaseRegimenProspective Studie030104 developmental biologychemistryAgricultural and Biological Sciences (all)lcsh:QMathematicsDevelopmental BiologyRNA viruses0301 basic medicineDAA HCV resistanceSofosbuvirPhysiologylcsh:MedicineLiver diseasechemistry.chemical_compoundMathematical and Statistical TechniquesMedicine and Health SciencesPathology and laboratory medicineMultidisciplinaryHepatitis C virusHepatitis CMedical microbiologyMiddle AgedHepatitis CBody FluidsVirusesCombinationFemaleAnatomyPathogensResearch Articlemedicine.drugPlateletsLedipasvirAdultDaclatasvirSettore MED/12 - GASTROENTEROLOGIAHCV liver diseases Cirrhosis DAA failureResearch and Analysis MethodsInternal medicineAntiviral Agentbusiness.industryViral pathogensBilirubinCell BiologyFibrosisHepatitis virusesMicrobial pathogensSurgeryLiver functionbusiness
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Efficacy of a 12-Week Simeprevir Plus Peginterferon/Ribavirin (PR) Regimen in Treatment-Naïve Patients with Hepatitis C Virus (HCV) Genotype 4 (GT4) …

2017

Background HCV GT4 accounts for up to 20% of HCV infections worldwide. Simeprevir, given for 12 weeks as part of a 24- or 48-week combination regimen with PR is approved for the treatment of chronic HCV GT4 infection. Primary study objectives were assessment of efficacy and safety of simeprevir plus PR in treatment-naïve patients with HCV GT4 treated for 12 weeks. Primary efficacy outcome was sustained virologic response 12 weeks post-treatment (SVR12). Additional objectives included investigation of potential associations of rapid virologic response and baseline factors with SVR12. Methods This multicentre, open-label, single-arm study (NCT01846832) evaluated efficacy and safety of simepre…

SimeprevirMalePsychologie appliquéeFetge - MalaltiesHepacivirusGastroenterologyPolyethylene GlycolPolyethylene Glycols0302 clinical medicinelcsh:Science61 - MedicinaLiver DiseasesSciences bio-médicales et agricolesCirrhosisInterferonLiver Fibrosis030211 gastroenterology & hepatologyDrug Therapy CombinationViral loadBiologieHumanmedicine.medical_specialtyCiències multidisciplinàriesGenotypeSaudi ArabiaAlpha interferon:Otros calificadores::Otros calificadores::/farmacoterapia [Otros calificadores]Gastroenterology and HepatologyMicrobiologyAntiviral Agents03 medical and health sciencesHumansAgedMedicine and health sciencesHepaciviruFlavivirusesInterleukinslcsh:ROrganismsInterleukinmedicine.diseaseRegimen:Digestive System Diseases::Liver Diseases [DISEASES]chemistryImmunologylcsh:QMedicaments - AdministracióDevelopmental BiologyRNA viruseslcsh:Medicinemedicine.disease_cause:Other subheadings::Other subheadings::/drug therapy [Other subheadings]Geographical Locationschemistry.chemical_compoundSimeprevirHospital Universitari Vall d’Hebron030212 general & internal medicinePathology and laboratory medicineMultidisciplinaryHepatitis C virusHepatitis CRecombinant ProteinMedical microbiologyMiddle AgedViral LoadHepatitis CRecombinant Proteins:enfermedades del sistema digestivo::enfermedades hepáticas [ENFERMEDADES]EuropeResearch DesignVirusesFemalePathogensResearch ArticleAdultAsiaAdolescentClinical Research DesignHepatitis C virusResearch and Analysis MethodsYoung AdultInternal medicineRibavirinmedicineddc:610Rapid Virologic ResponseAntiviral AgentBiology and life sciencesbusiness.industryRibavirinViral pathogensInterferon-alphaFibrosisHepatitis virusesMicrobial pathogensPeople and PlacesAdverse EventsInterferonsbusinessPLoS ONE
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Novel approach to study the perception of animacy in dogs.

2017

Humans tend to perceive inanimate objects as animate based on simple motion cues. So far this perceptual bias has been studied mostly in humans by utilizing two-dimensional video and interactive displays. Considering its importance for survival, the perception of animacy is probably also widespread among animals, however two-dimensional displays are not necessarily the best approach to study the phenomenon in non-human species. Here we applied a novel method to study whether dogs recognize a dependent (chasing-like) movement pattern performed by inanimate agents in live demonstration. We found that dogs showed more interest toward the agents that demonstrated the chasing-like motion, compar…

Social CognitionVisionlcsh:MedicineSocial SciencesInteractive displaysMotion (physics)0302 clinical medicinePsychologySense of Agencylcsh:Sciencemedia_commonMammalsMultidisciplinaryBehavior AnimalAnimal BehaviorPhysics05 social sciencesClassical MechanicsCamerasMotion cuesMovement patternOptical EquipmentVertebratesPhysical SciencesEngineering and TechnologySensory PerceptionAnimacyPsychologyCognitive psychologyResearch ArticleSocial Psychologymedia_common.quotation_subjectEquipment050105 experimental psychology03 medical and health sciencesMotionDogsPerceptionAnimals0501 psychology and cognitive sciencesAnimal behaviorBehaviorlcsh:ROrganismsCognitive PsychologyBiology and Life SciencesAmniotesCognitive Sciencelcsh:QPerceptionZoology030217 neurology & neurosurgeryNeurosciencePloS one
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Reservoir computing model of prefrontal cortex creates novel combinations of previous navigation sequences from hippocampal place-cell replay with sp…

2019

As rats learn to search for multiple sources of food or water in a complex environment, they generate increasingly efficient trajectories between reward sites. Such spatial navigation capacity involves the replay of hippocampal place-cells during awake states, generating small sequences of spatially related place-cell activity that we call “snippets”. These snippets occur primarily during sharp-wave-ripples (SWRs). Here we focus on the role of such replay events, as the animal is learning a traveling salesperson task (TSP) across multiple trials. We hypothesize that snippet replay generates synthetic data that can substantially expand and restructure the experience available and make learni…

Social SciencesNeocortexHippocampusLearning and MemoryAnimal CellsMedicine and Health SciencesPsychologyBiology (General)Problem SolvingProjectionsMammalsNeuronsBehavior AnimalApplied MathematicsSimulation and ModelingBrainEukaryotaAnimal ModelsReactivationExperimental Organism SystemsVertebratesPhysical Sciences[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]AnatomyCellular TypesAlgorithmsStateResearch ArticleMidline ThalamusReverse ReplayQH301-705.5Neural ComputationPrefrontal CortexResearch and Analysis MethodsRodentsModel OrganismsRewardAnimalsLearningComputer Simulation[SDV.NEU] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]ExperienceOrganismsCognitive PsychologySystemsBiology and Life SciencesCell BiologyRatsNeostriatumCellular NeuroscienceAmniotesAnimal StudiesCognitive ScienceMathematicsNeuroscience
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Spatial microbial community structure and biodiversity analysis in "extreme" hypersaline soils of a semiarid Mediterranean area

2015

In recent years specific attention has been paid on the biotechnological potential of microorganisms in extreme soils, in particular in saline soils. Salinity is one of the most widespread soil degradation processes on the Earth, and saline soils can be defined as extreme soils or border line habitats in which several factors, as high salt content, may limit the growth of organisms. In this study, the physical, chemical and microbiological soil properties were investigated in the shallower horizon of natural saltaffected soils in Sicily (Italy). The main aim of the research was to evaluate the structure and diversity of bacterial and archaeal communities by terminal-restriction fragment len…

Soil salinityEcologyEcologySoil microorganismGenetic diversity; Saline soils; Soil microorganisms; Spatial variability; T-RFLP; Soil Science; Ecology; Agricultural and Biological Sciences (miscellaneous)BiodiversitySoil ScienceVegetationSpatial variabilityAgricultural and Biological Sciences (miscellaneous)Genetic diversitySalinityMicrobial population biologyT-RFLPSettore AGR/14 - PedologiaSoil retrogression and degradationSoil waterSettore BIO/03 - Botanica Ambientale E ApplicataEnvironmental scienceSpecies richnessSaline soil
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Review of the impact of biogas digestates on the microbiological quality of agricultural soils

2023

The global production of biogas has increased threefold during the last decade to partly replace fossil fuels, yet biogas production by anaerobic digestion generates substantial amounts of by-products named digestates. These biogas digestates can be recycled in soils to fertilize crops and to sequester carbon. However, the impact of digestates on the soil biological is actually poorly known. Here we reviewed the impact of digestates published in 56 articles reporting 23 microbial parameters. Half of the articles show neutral effects of biogas digestates and 7% showed negative effects. 25% of the articles show more stimulation of biogas digestates for the soil microbial quality, compared to …

SoilMeta-analysis[SDV.SA] Life Sciences [q-bio]/Agricultural sciencessolmicro-organismesDigestatMicroorganismsBiogasAgricultureméta-analysebiogaz[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyAnaerobic digestate
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Structural analysis of the lipid A isolated from Hafnia alvei 32 and PCM 1192 lipopolysaccharides[S]

2010

Hafnia alvei, a Gram-negative bacterium, is an opportunistic pathogen associated with mixed hospital infections, bacteremia, septicemia, and respiratory diseases. The majority of clinical symptoms of diseases caused by this bacterium have a lipopolysaccharide (LPS, endotoxin)-related origin. The lipid A structure affects the biological activity of endotoxins predominantly. Thus, the structure of H. alvei lipid A was analyzed for the first time. The major form, asymmetrically hexa-acylated lipid A built of beta-D-GlcpN4P-(1-->6)-alpha-D-GlcpN1P substituted with (R)-14:0(3-OH) at N-2 and O-3, 14:0(3-(R)-O-12:0) at N-2', and 14:0(3-(R)-O-14:0) at O-3', was identified by ESI-MS(n) and MALDI-tim…

Spectrometry Mass Electrospray IonizationendotoxinLipopolysaccharideAcylationOligosaccharidesQD415-436BiochemistryMicrobiologyLipid Achemistry.chemical_compoundOpportunistic pathogenEndocrinologyPalmitoylationEscherichiapalmitoylationmass spectrometryPolish Collection of MicroorganismsbiologyHafnia alveiBiological activityCell Biologybiology.organism_classificationOxygenHafnia alveiLipid AchemistrySpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationlipids (amino acids peptides and proteins)BacteriaResearch ArticleJournal of Lipid Research
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