Search results for "OTI"

showing 10 items of 20628 documents

Cytosolic calcium rises and related events in ergosterol-treated Nicotiana cells

2011

International audience; The typical fungal membrane component ergosterol was previously shown to trigger defence responses and protect plants against pathogens. Most of the elicitors mobilize the second messenger calcium, to trigger plant defences. We checked the involvement of calcium in response to ergosterol using Nicotiana plumbaginifolia and Nicotiana tabacum cv Xanthi cells expressing apoaequorin in the cytosol. First, it was verified if ergosterol was efficient in these cells inducing modifications of proton fluxes and increased expression of defence-related genes. Then, it was shown that ergosterol induced a rapid and transient biphasic increase of free [Ca2þ]cyt which intensity dep…

0106 biological sciencesTime FactorsPhysiologyNicotiana tabacumPlant SciencesterolsSecond Messenger Systemstobacco01 natural scienceschemistry.chemical_compoundCytosolpolycyclic compoundsPhosphorylationCalcium signalingreactive oxygen species0303 health sciencesErgosterolelicitorbiologyergosterolHydrogen-Ion ConcentrationPlants Genetically ModifiedRecombinant ProteinsCell biologyBiochemistrySecond messenger systemReactive oxygen species; Calcium signature; Elicitor; Signal transduction; MAPKs; tobaccolipids (amino acids peptides and proteins)Protonssignal transductionCell Survivalnicotiana plumbaginifoliachemistry.chemical_elementnicotiana tabacumoxydantCalciumcalcium signature03 medical and health sciencesAequorinMAPKsBAPTAGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCalcium Signaling030304 developmental biologyMitogen-Activated Protein Kinase KinasesCalcium metabolismHydrogen Peroxidebiochemical phenomena metabolism and nutritionbiology.organism_classificationCytosolchemistryCalciumApoproteins010606 plant biology & botany
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Genome reduction of the aphid endosymbiont Buchnera aphidicola in a recent evolutionary time scale.

2007

International audience; Genome reduction, a typical feature of symbiotic bacteria, was analyzed in the last stages of evolution of Buchnera aphidicola, the primary aphid endosymbiont, in two neutrally evolving regions: the pseudogene cmk and an intergenic region. These two regions were examined in endosymbionts from several lineages of their aphid host Rhopalosiphum padi, and different species of the same genus, whose divergence times ranged from 0.62 to 19.51 million years. Estimates of nucleotide substitution rates were between 4.3 and 6.7 x 10(-9) substitution/site/year, with G or C nucleotides being substituted around four times more frequently than A or T. Two different types of indel …

0106 biological sciencesTime FactorsPseudogeneBiology010603 evolutionary biology01 natural sciencesGenomeDNA MitochondrialEvolution Molecular03 medical and health sciencesIntergenic regionBuchneraPhylogeneticsGeneticsAnimalsMolecular clockIndelSymbiosisPhylogeny030304 developmental biologyGenetics0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsBase SequenceGeographyNucleotidesGeneral Medicinebiology.organism_classificationFixation (population genetics)HaplotypesAphidsCalibrationMutationBuchneraGenome BacterialGene
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A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution.

2012

BackgroundTortricidae, one of the largest families of microlepidopterans, comprise about 10,000 described species worldwide, including important pests, biological control agents and experimental models. Understanding of tortricid phylogeny, the basis for a predictive classification, is currently provisional. We present the first detailed molecular estimate of relationships across the tribes and subfamilies of Tortricidae, assess its concordance with previous morphological evidence, and re-examine postulated evolutionary trends in host plant use and biogeography.Methodology/principal findingsWe sequenced up to five nuclear genes (6,633 bp) in each of 52 tortricids spanning all three subfamil…

0106 biological sciencesTortricidaeGenetic SpeciationScienceZoologyChlidanotinaeGenes InsectMothsAnimal Phylogenetics010603 evolutionary biology01 natural sciencesEvolution MolecularMonophylyPhylogeneticsAnimalsEvolutionary SystematicsOlethreutinaeBiologyPhylogenyLikelihood FunctionsEvolutionary BiologyMultidisciplinarybiologyPhylogenetic treeEcologyQRComputational BiologyAgricultureBiodiversityAutecologybiology.organism_classificationPhylogenetics010602 entomologyBiogeographyEvolutionary biologyAnimal TaxonomyMolecular phylogeneticsMedicinePest ControlSequence AnalysisZoologyEntomologyTortricinaeMultilocus Sequence TypingResearch ArticlePloS one
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2020

Abstract Lichens are valuable models in symbiosis research and promising sources of biosynthetic genes for biotechnological applications. Most lichenized fungi grow slowly, resist aposymbiotic cultivation, and are poor candidates for experimentation. Obtaining contiguous, high-quality genomes for such symbiotic communities is technically challenging. Here, we present the first assembly of a lichen holo-genome from metagenomic whole-genome shotgun data comprising both PacBio long reads and Illumina short reads. The nuclear genomes of the two primary components of the lichen symbiosis—the fungus Umbilicaria pustulata (33 Mb) and the green alga Trebouxia sp. (53 Mb)—were assembled at contiguit…

0106 biological sciencesTrebouxia0303 health sciencesbiologybiology.organism_classification010603 evolutionary biology01 natural sciencesGenome03 medical and health sciencesAposymbioticSymbiosisMetagenomicsEvolutionary biologyHorizontal gene transferGeneticsLichenGeneEcology Evolution Behavior and Systematics030304 developmental biologyGenome Biology and Evolution
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Seasonal fluctuations in leaf phenolic composition under UV manipulations reflect contrasting strategies of alder and birch trees

2010

Seasonal variation in leaf phenolic composition may be important for acclimation of plants to seasonal changes in their biotic and abiotic environment. For a realistic assessment of how plants respond to solar UV-B (280-315 nm) and UV-A (315-400 nm) radiation, seasonal variation in both environment and plant responses needs to be taken into account. This also has implications for studies concerning stratospheric ozone depletion and resulting increased UV-B radiation, as other environmental variables and/or plant phenology could interact with UV radiation. To elucidate this, we established a field experiment using plastic films attenuating different parts of the solar UV spectrum. The concen…

0106 biological sciencesUltraviolet RaysPhysiologyGrowing seasonPlant ScienceAlnus01 natural sciencesAlderTrees03 medical and health sciencesPhenolsBotanyGeneticsBetula030304 developmental biologyAbiotic componentBetulaceae0303 health sciencesAlnus incanabiologyPhenologyCell BiologyGeneral MedicineBetula pubescens15. Life on landbiology.organism_classificationPlant Leaves13. Climate actionSeasons010606 plant biology & botanyWoody plantPhysiologia Plantarum
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Hierarchy of factors impacting grape berry mass: separation of direct and indirect effects on major berry metabolites

2018

Final berry mass, a major quality factor in wine production, is determined by the integrated effect of biotic and abiotic factors that can also influence berry composition. Under field conditions, interactions between these factors complicate study of the variability of berry mass and composition. Depending on the observation scale, the hierarchy of the impact degree of these factors can vary. The present work examines the simultaneous effects of the major factors influencing berry mass and composition to create a hierarchy by impact degree. A second objective was to separate the possible direct effects of factors on berry composition from an indirect effect mediated through their impact on…

0106 biological sciencesVineBerryHorticulture01 natural sciencesBerry seed040501 horticultureVeraisonchemistry.chemical_compoundSoilBotanySugarBerry maAbiotic componentYeast assimilable nitrogen (YAN)ViruBerry composition; Berry mass; Berry seed; Soil; Vine water status; Virus; Yeast assimilable nitrogen (YAN);food and beverages04 agricultural and veterinary sciences15. Life on landIndirect effectSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeHorticulturechemistryBerry compositionComposition (visual arts)Malic acidVine water statu0405 other agricultural sciences010606 plant biology & botanyFood Science
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Environmental change and disease dynamics: effects of intensive forest management on Puumala hantavirus infection in boreal bank vole populations.

2012

Intensive management of Fennoscandian forests has led to a mosaic of woodlands in different stages of maturity. The main rodent host of the zoonotic Puumala hantavirus (PUUV) is the bank vole (Myodes glareolus), a species that can be found in all woodlands and especially mature forests. We investigated the influence of forest age structure on PUUV infection dynamics in bank voles. Over four years, we trapped small mammals twice a year in a forest network of different succession stages in Northern Finland. Our study sites represented four forest age classes from young (4 to 30 years) to mature (over 100 years) forests. We show that PUUV-infected bank voles occurred commonly in all forest age…

0106 biological sciencesViral DiseasesEpidemiologyPopulation Dynamicslcsh:MedicineWoodlandWildlife01 natural sciencesPopulation densityPuumala virusTreesZoonoseslcsh:ScienceSmall Animals0303 health sciencesMultidisciplinarybiologyEcologyEcologyArvicolinaeZoonotic DiseasesBank voleMammalogyInfectious DiseasesArvicolinaeVeterinary DiseasesHemorrhagic Fever with Renal SyndromeMedicinePuumala virusTemperate rainforestResearch ArticleHantavirusHantavirus InfectionsAnimal TypeseducationForest management010603 evolutionary biologyMicrobiologyVector BiologyInfectious Disease Epidemiology03 medical and health sciencesVirologyAnimalsDisease DynamicsBiology030304 developmental biologyPopulation Biologylcsh:RfungiHemorrhagic Fevers15. Life on landbiology.organism_classificationEmerging Infectious Diseasesta1181lcsh:QVeterinary Science3111 BiomedicinePopulation EcologyHantavirus InfectionZoologyPloS one
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Arabidopsis thaliana nicotianamine synthase 4 is required for proper response to iron deficiency and to cadmium exposure.

2013

International audience; The nicotianamine synthase (NAS) enzymes catalyze the formation of nicotianamine (NA), a non-proteinogenic amino acid involved in iron homeostasis. We undertook the functional characterization of AtNAS4, the fourth member of the Arabidopsis thaliana NAS gene family. A mutant carrying a T-DNA insertion in AtNAS4 (atnas4), as well as lines overexpressing AtNAS4 both in the atnas4 and the wild-type genetic backgrounds, were used to decipher the role of AtNAS4 in NA synthesis, iron homeostasis and the plant response to iron deficiency or cadmium supply. We showed that AtNAS4 is an important source for NA. Whereas atnas4 had normal growth in iron-sufficient medium, it dis…

0106 biological sciences[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyMESH : Azetidinecarboxylic AcidFMN ReductaseArabidopsis thalianaMutantArabidopsisGene ExpressionPlant Science01 natural sciencesMESH : Cation Transport ProteinsMESH : IronMESH : Arabidopsis ProteinsNicotianamine synthaseMESH : Plants Genetically Modifiedchemistry.chemical_compoundMESH : ArabidopsisGene Expression Regulation PlantGene expressionMESH: Genes PlantArabidopsis thalianaMESH : DNA BacterialHomeostasisMESH: ArabidopsisNicotianamineMESH: Stress PhysiologicalCation Transport ProteinsMESH : Adaptation PhysiologicalMESH : Cadmium2. Zero hungerchemistry.chemical_classification0303 health sciencesCadmiumMESH: IronbiologyGeneral MedicineIron DeficienciesPlants Genetically ModifiedAdaptation PhysiologicalMESH: Azetidinecarboxylic AcidMESH : PhenotypePhenotypeBiochemistryMESH: HomeostasisMESH : HomeostasisMESH : MutationAzetidinecarboxylic AcidCadmiumDNA BacterialMESH: Gene ExpressionMESH: MutationIronMESH: Cadmiumchemistry.chemical_elementMESH: FerritinsMESH: Arabidopsis ProteinsMESH: Alkyl and Aryl TransferasesGenes PlantMESH: PhenotypeNicotianamine synthase03 medical and health sciencesMESH: Cation Transport ProteinsStress PhysiologicalIron homeostasisGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyIron deficiency (plant disorder)MESH: Gene Expression Regulation PlantMESH : Genes PlantMESH : Alkyl and Aryl TransferasesMESH : Stress Physiological030304 developmental biologyMESH : FMN ReductaseAlkyl and Aryl TransferasesArabidopsis ProteinsIron deficiencyNitric oxideNicotianaminebiology.organism_classificationMESH: Adaptation PhysiologicalMESH: DNA BacterialMESH : Gene ExpressionEnzymechemistryMESH: FMN ReductaseMESH: Plants Genetically ModifiedFerritinsMutationbiology.proteinMESH : FerritinsAgronomy and Crop ScienceMESH : Gene Expression Regulation Plant010606 plant biology & botany
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Regulation of endocytosis by external stimuli in plant cells

2009

International audience; Endocytosis is an essential process for the normal growth and development of eukaryotic cells. This mini-review presents an overview of endocytosis regulation in challenging environmental conditions such as nutrient availability, hormonal treatment or abiotic/biotic stress in plant cells. Recent data establishing a relationship between endocytosis and reactive oxygen species (ROS) production are also discussed.

0106 biological sciences[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyplantPlant ScienceBiologyabiotic and biotic cuesEndocytosisreactive oxygen species (ROS)01 natural sciencesFight-or-flight response03 medical and health sciencesnutrients[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEcology Evolution Behavior and Systematics030304 developmental biologyAbiotic componentchemistry.chemical_classification0303 health sciencesReactive oxygen speciesBiotic stressPlant cellEndocytosisCell biologyPlant developmentchemistryNormal growth010606 plant biology & botany
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Raspberry breeding and biotisation for increasing plant stress tolerance and antioxidant activity

2008

International audience; Chemical inputs used in red fruit production can be detrimental to the environment and pesticides are not always efficient in controlling plant diseases. In addition, it is suspected that conventional agricultural practices have a negative impact on antioxidant activities in red fruits. Therefore new cultural approaches are required in order to produce red fruits of high quality. This involves an integrated programme of plant breeding and development of sustainable agricultural practices. Antioxidant activity was compared in leaves and berries of six raspberry cultivars for the selection of varieties for a breeding programme. This showed that cultivars that had the h…

0106 biological sciences[SDE] Environmental SciencesAntioxidantmedicine.medical_treatment[SDV]Life Sciences [q-bio]HorticultureBiologyFRAMBOISIER01 natural sciencesAcclimatizationARBUSCULAR MYCORRHIZAL FUNGIFight-or-flight responseMycorrhizal fungimedicineCultivarRELATION PLANTE-MICROORGANISMEWater content2. Zero hungerfungifood and beverages04 agricultural and veterinary sciences15. Life on landPCR DIAGNOSTICSBlowing a raspberry[SDV] Life Sciences [q-bio]Plant developmentHorticultureAgronomyBIOTISATION[SDE]Environmental Sciences040103 agronomy & agriculturePHYTOPHTHORA FRAGARIAE VAR.RUBI0401 agriculture forestry and fisheries010606 plant biology & botany
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