Search results for "Optogenetics"

showing 4 items of 34 documents

Optogenetically Controlled Activity Pattern Determines Survival Rate of Developing Neocortical Neurons

2021

A substantial proportion of neurons undergoes programmed cell death (apoptosis) during early development. This process is attenuated by increased levels of neuronal activity and enhanced by suppression of activity. To uncover whether the mere level of activity or also the temporal structure of electrical activity affects neuronal death rates, we optogenetically controlled spontaneous activity of synaptically-isolated neurons in developing cortical cultures. Our results demonstrate that action potential firing of primary cortical neurons promotes neuronal survival throughout development. Chronic patterned optogenetic stimulation allowed to effectively modulate the firing pattern of single ne…

Programmed cell deathPatch-Clamp TechniquesQH301-705.5Action Potentialsactivity patternStimulationNeocortexOptogeneticsCatalysisCalcium in biologyArticleInorganic ChemistryBurstingMicePremovement neuronal activityAnimalsPhysical and Theoretical ChemistryBiology (General)optogeneticsMolecular BiologyQD1-999developmentSpectroscopyCells CulturedmouseNeuronsChemistryOrganic ChemistryapoptosisGeneral MedicineComputer Science ApplicationsCortex (botany)ChemistryLuminescent Proteinscortexnervous systemApoptosisBaxNeuroscienceburstInternational Journal of Molecular Sciences
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OPETH: Open Source Solution for Real-Time Peri-Event Time Histogram Based on Open Ephys

2019

Single cell electrophysiology remains one of the most widely used approaches of systems neuroscience. Decisions made by the experimenter during electrophysiology recording largely determine recording quality, duration of the project and value of the collected data. Therefore, online feedback aiding these decisions can lower monetary and time investment, and substantially speed up projects as well as allow novel studies otherwise not possible due to prohibitively low throughput. Real-time feedback is especially important in studies that involve optogenetic cell type identification by enabling a systematic search for neurons of interest. However, such tools are scarce and limited to costly co…

Cell typeSpeedupComputer scienceBiomedical EngineeringNeuroscience (miscellaneous)peri-event time histogramOptogeneticsMachine learningcomputer.software_genreopen ephys050105 experimental psychologyNeuron typeslcsh:RC321-571Photostimulation03 medical and health sciencesSoftware0302 clinical medicineopen sourceHistogramMethods0501 psychology and cognitive sciencesoptogeneticslcsh:Neurosciences. Biological psychiatry. Neuropsychiatrycomputer.programming_language030304 developmental biologySystems neuroscience0303 health sciencesbusiness.industrybehavior05 social sciencesPattern recognitionPython (programming language)NeurophysiologyelectrophysiologyComputer Science ApplicationsElectrophysiologyOpen sourceCell electrophysiologyArtificial intelligencebusinesscomputer030217 neurology & neurosurgeryNeuroscienceFrontiers in Neuroinformatics
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2020

Communication with the hematopoietic system is a vital component of regulating brain function in health and disease. Traditionally, the major routes considered for this neuroimmune communication are by individual molecules such as cytokines carried by blood, by neural transmission, or, in more severe pathologies, by the entry of peripheral immune cells into the brain. In addition, functional mRNA from peripheral blood can be directly transferred to neurons via extracellular vesicles (EVs), but the parameters that determine their uptake are unknown. Using varied animal models that stimulate neuronal activity by peripheral inflammation, optogenetics, and selective proteasome inhibition of dop…

0301 basic medicineGeneral Immunology and MicrobiologyGeneral NeuroscienceDopaminergicStimulationInflammationOptogeneticsBiologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences030104 developmental biology0302 clinical medicineIn vivoStereotaxic techniquemedicinePremovement neuronal activitymedicine.symptomSignal transductionGeneral Agricultural and Biological SciencesNeuroscience030217 neurology & neurosurgeryPLOS Biology
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Cortical Recruitment Determines Learning Dynamics and Strategy

2018

AbstractSalience is a broad and widely used concept in neuroscience whose neuronal correlates, however, remain elusive. In behavioral conditioning, salience is used to explain various effects, such as stimulus overshadowing, and refers to how fast and strongly a stimulus can be associated with a conditioned event. Here, we show that sounds of diverse quality, but equal intensity and perceptual detectability, can recruit different levels of population activity in mouse auditory cortex. When using these sounds as cues in a Go/NoGo discrimination task, the degree of cortical recruitment matches the salience parameter of a reinforcement learning model used to analyze learning speed. We test an …

0303 health scienceseducation.field_of_studymedia_common.quotation_subjectPopulationStimulus (physiology)OptogeneticsAuditory cortexStimulus Salience03 medical and health sciences0302 clinical medicineSalience (neuroscience)PerceptionReinforcement learning10. No inequalityeducationPsychologyAssociation (psychology)Neuroscience030217 neurology & neurosurgerymedia_common030304 developmental biologySSRN Electronic Journal
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