Search results for "Overtone"

showing 4 items of 34 documents

Retinal Vibrations in Bacteriorhodopsin are Mechanically Harmonic but Electrically Anharmonic: Evidence From Overtone and Combination Bands

2021

Fundamental vibrations of the chromophore in the membrane protein bacteriorhodopsin (BR), a protonated Schiff base retinal, have been studied for decades, both by resonance Raman and by infrared (IR) difference spectroscopy. Such studies started comparing vibrational changes between the initial BR state (all-trans retinal) and the K intermediate (13-cis retinal), being later extended to the rest of intermediates. They contributed to our understanding of the proton-pumping mechanism of BR by exploiting the sensitivity of fundamental vibrational transitions of the retinal to its conformation. Here, we report on new bands in the 2,500 to 1,800 cm−1 region of the K-BR difference FT-IR spectrum.…

bacteriorhodopsinQH301-705.5anharmonicityFTIR—spectroscopymicrobial rhodopsinscombinations and overtonesBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistryretinalanharmonic vibrational calculationsvibrational quasi-degenerate perturbation theoryMolecular BiosciencesBiology (General)Molecular BiologyOriginal ResearchFrontiers in Molecular Biosciences
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Complexes of Glycolic Acid with Nitrogen Isolated in Argon Matrices. II : Vibrational Overtone Excitations

2019

Structural changes of glycolic acid (GA) complex with nitrogen induced by selective overtone excitation of the νOH mode were followed in argon matrices using FTIR spectroscopy. For the most stable SSC1 complex present in different trapping sites directly upon deposition site, selective changes in the νOH region were achieved upon near-infrared irradiation. Simultaneously, new conformers of the GA…N2 complex were formed, giving rise to several sets of bands in the νOH and νC=O regions of the spectra. Both position and intensity of new absorptions appeared to be highly sensitive on the wavelength of radiation used, as well as on the annealing of the matrix. Based on theoretical calculations a…

hydrogen bondtyppivärähtelytvetysidoksetkarboksyylihapotmatrix isolationvibrational overtonemolekyylitcarboxylic acidlaskennallinen kemiacomputational chemistryvibrational spectroscopy
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Raman spectroscopy of glycolic acid complexes with N2

2019

High overtone excitation induced conformational isomerization of glycolic acid – nitrogen complex in an argon matrix was investigated by Raman spectroscopy. The interaction between glycolic acid and nitrogen change the green light (532 nm) induced isomerization processes compared to non-complexed glycolic acid. The 180° rotation around of the Csingle bondC bond and stabilization of carboxyl Odouble bondCsingle bondOsingle bondH dihedral angle to trans position were the main conformational changes observed in the complex of the lowest energy conformer and nitrogen. Interestingly, only one stable light-induced conformational product was observed, which isomerises back to the lowest energy con…

isomeriaKineticsspektroskopiachemistry.chemical_elementDihedral angle010402 general chemistryPhotochemistry01 natural sciencesisomerizationAnalytical ChemistryInorganic Chemistrysymbols.namesakechemistry.chemical_compoundraman spectroscopymolecular complexConformational isomerismta116high overtone excitationSpectroscopyGlycolic acid010405 organic chemistryChemistryOrganic ChemistryMatrix isolationmatrix isolationmolekyylitNitrogen0104 chemical sciencessymbolsRaman spectroscopyIsomerization
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Vibrational Perturbations and Ligand–Layer Coupling in a Single Crystal of Au144(SC2H4Ph)60 Nanocluster

2015

We have determined vibrational signatures and optical gap of the Au144(PET)60 (PET: phenylethylthiol, SC2H4Ph) nanocluster solvated in deuterated dichloromethane (DCM-D2, CD2Cl2) and in a single crystal. For crystals, solid-state (13)C NMR and X-ray diffraction were also measured. A revised value of 2200 cm(-1) (0.27 eV) was obtained for the optical gap in both phases. The vibrational spectra of solvated AU144(PET)60 closely resembles that of neat PET, while the crystalline-state spectrum exhibits significant inhomogeneous spectral broadening, frequency shifts, intensity transfer between vibrational modes, and an increase in the overtone and combination transition intensities. Spectral broa…

ta114ChemistryOvertoneta221Analytical chemistryOvertone bandMolecular physicsHot bandCrystalMolecular vibrationGeneral Materials SciencePhysical and Theoretical ChemistryRotational–vibrational couplingSingle crystalta116Doppler broadeningThe Journal of Physical Chemistry Letters
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