Search results for "PATHWAY"

showing 10 items of 1685 documents

The Glycerate and Phosphorylated Pathways of Serine Synthesis in Plants : The Branches of Plant Glycolysis Linking Carbon and Nitrogen Metabolism

2018

Serine metabolism in plants has been studied mostly in relation to photorespiration where serine is formed from two molecules of glycine. However, two other pathways of serine formation operate in plants and represent the branches of glycolysis diverging at the level of 3-phosphoglyceric acid. One branch (the glycerate – serine pathway) is initiated in the cytosol and involves glycerate formation from 3-phosphoglycerate, while the other (the phosphorylated serine pathway) operates in plastids and forms phosphohydroxypyruvate as an intermediate. Serine formed in these pathways becomes a precursor of glycine, formate and glycolate accumulating in stress conditions. The pathways can be linked …

0106 biological sciences0301 basic medicineycolysisReviewPlant Sciencelcsh:Plant culture01 natural sciencesSerine03 medical and health scienceslcsh:SB1-1110GlycolysisPlastidplastidNitrogen cycleglycerate serine pathwayγ-aminobutyric acid (GABA)gamma-aminobutyric acid (GABA)ChemistryBotanyCorrectionMetabolismBotanikglycolysisphosphorylated serine pathway030104 developmental biologyBiochemistryGlycinePhotorespirationPhosphorylation010606 plant biology & botany
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Periphyton support for littoral secondary production in a highly humic boreal lake

2016

Steep stratification and poor light penetration in highly humic lakes typically restrict oxygenated littoral areas to narrow lake margins. However, in some instances, surrounding floating vegetation mats can sustain highly productive periphyton and more diverse invertebrate communities than pelagic areas. Little is known about how these littoral food webs function or the extent to which the pelagic and littoral food webs are coupled. We added 15N-labeled ammonium nitrate to the floating moss mat surrounding the littoral zone of Mekkojärvi, a small highly humic and fishless lake in southern Finland. Our goal was to increase the δ15N values of periphyton to investigate the diets of littoral i…

0106 biological sciencesC-13 ADDITIONPOLYHUMIC LAKEAquatic ScienceAQUATIC FOOD WEBSlittoral invertebrates010603 evolutionary biology01 natural sciencesbenthic algaeCARBONMETHANESTABLE-ISOTOPESECOSYSTEMSLittoral zonePeriphytonEcology Evolution Behavior and SystematicsInvertebrateIsotope analysisPerchEcologybiologyEcologystable-isotope analysis010604 marine biology & hydrobiologyPelagic zoneδ15Nisotope additionsbiology.organism_classificationBorealmethane-oxidizing bacteriaCONSUMER PRODUCTIONEnvironmental scienceta1181BENTHIC PATHWAYSTERRESTRIAL ORGANIC-MATTERFreshwater Science
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From clear lakes to murky waters – tracing the functional response of high-latitude lake communities to concurrent ‘greening’ and ‘browning’

2019

Climate change and the intensification of land use practices are causing widespread eutrophication of subarctic lakes. The implications of this rapid change for lake ecosystem function remain poorly understood. To assess how freshwater communities respond to such profound changes in their habitat and resource availability, we conducted a space-for-time analysis of food-web structure in 30 lakes situated across a temperature-productivity gradient equivalent to the predicted future climate of subarctic Europe (temperature +3 degrees C, precipitation +30% and nutrient +45 mu g L-1 total phosphorus). Along this gradient, we observed an increase in the assimilation of pelagic-derived carbon from…

0106 biological sciencesDYNAMICSIMPACTSFood Chainecological stable statesClimate ChangeTROPHIC POSITION010603 evolutionary biology01 natural sciencesjärvetspace-for-time114 Physical sciencesFISHhabitat couplingstable isotope analysisVDP::Mathematics and natural scienses: 400::Zoology and botany: 480FOR-TIME SUBSTITUTIONSPACEEcosystem14. Life underwaterHABITATEcology Evolution Behavior and SystematicsEcosystemIsotope analysisTrophic levelCLIMATE-CHANGEEcology010604 marine biology & hydrobiologyrehevöityminencryptic energetic pathwaysLake ecosystemSHIFTSPelagic zoneeliöyhteisöt15. Life on landSubarctic climateFood webEuropetrophic nicheLakes13. Climate actionBenthic zoneVDP::Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 4801181 Ecology evolutionary biologyEnvironmental scienceta1181FOOD-WEBympäristönmuutoksetravintoverkot
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Water recycling in leaves of Lithops (Aizoaceae)

2016

Lithops plants consist of a pair of succulent leaves inserted on a short stem; each growing season young leaves develop in a cavity formed between the older pair. Young leaves can take up water from the older pair allowing the plant to maintain growth and leaf expansion even without external supply of water. Recycling water between vegetative organs is one of the possible adaptation strategies of plants under drought stress, but it had never been demonstrated experimentally in Lithops. The methodology used to verify the existence of water redistribution from old leaves to young leaves was fluorescence microscopy, using two dyes to follow the water pathway inside the plant: Sulforhodamine G …

0106 biological sciencesDrought stressGrowing seasonPlant Science010603 evolutionary biology01 natural sciencesfluorescent tracerBotanyapoplastic pathwaysymplastic pathwaySettore BIO/04 - Fisiologia Vegetalesucculent plantEcology Evolution Behavior and SystematicsLeaf expansionShort stembiologyfungidrought strefood and beveragesLithopsbiology.organism_classificationAdaptation strategiesApoplastAizoaceaeSettore BIO/03 - Botanica Ambientale E Applicata010606 plant biology & botany
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Constitutive Activation of the Midgut Response to Bacillus thuringiensis in Bt-Resistant Spodoptera exigua

2010

Bacillus thuringiensis is the most effective microbial control agent for controlling numerous species from different insect orders. The main threat for the long term use of B. thuringiensis in pest control is the ability of insects to develop resistance. Thus, the identification of insect genes involved in conferring resistance is of paramount importance. A colony of Spodoptera exigua (Lepidoptera: Noctuidae) was selected for 15 years in the laboratory for resistance to Xentari (TM), a B. thuringiensis-based insecticide, reaching a final resistance level of greater than 1,000-fold. Around 600 midgut ESTs were analyzed by DNA-macroarray in order to find differences in midgut gene expression …

0106 biological sciencesDrug Resistancelcsh:MedicineGene ExpressionInsectaminopeptidase n01 natural sciencesAminopeptidasesHemolysin ProteinsEndotoxinmanduca-sextaBacillus thuringiensisInsect ProteinBiotechnology/Applied Microbiologylcsh:Scienceheliothis-virescensmedia_common0303 health sciencesLarvaMultidisciplinarybiologymediated insect resistanceGenetics and Genomics/Gene ExpressionEcology/Population Ecologybacterial-infectionNoctuidaeInsect ProteinsResearch Articlemedia_common.quotation_subjectAminopeptidaseMolecular Sequence DataBacillus thuringiensisBacterial ProteinSpodopteraSpodopterastem-cell proliferationMicrobiology03 medical and health sciencesMicrobiology/Applied MicrobiologyBacterial ProteinsExiguaBotanyBacillus thuringiensiAnimalscrystal proteinsBIOS Plant Development SystemsAmino Acid Sequencekinase pathways030304 developmental biologyposterior midgutHeliothis virescensBacillus thuringiensis ToxinsAnimaltrichoplusia-nilcsh:RfungiMidgutHemolysin Proteinbiology.organism_classificationEndotoxinsGastrointestinal Tract010602 entomologyPlant Biology/Agricultural Biotechnologylcsh:QSequence Alignment
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Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci

2015

Background The whitefly Bemisia tabaci is an important agricultural pest with global distribution. This phloem-sap feeder harbors a primary symbiont, “Candidatus Portiera aleyrodidarum”, which compensates for the deficient nutritional composition of its food sources, and a variety of secondary symbionts. Interestingly, all of these secondary symbionts are found in co-localization with the primary symbiont within the same bacteriocytes, which should favor the evolution of strong interactions between symbionts. Results In this paper, we analyzed the genome sequences of the primary symbiont Portiera and of the secondary symbiont Hamiltonella in the B. tabaci Mediterranean (MED) species in orde…

0106 biological sciencesHamiltonellaCandidatus Portiera aleyrodidarum[SDV]Life Sciences [q-bio]Molecular Sequence DataWhiteflyPortiera010603 evolutionary biology01 natural sciencesGenomeHemiptera03 medical and health sciencesMetabolic complementationSymbiosisEnterobacteriaceaeBotanyGeneticsAnimalsAmino AcidsSymbiosisIn Situ Hybridization Fluorescence030304 developmental biology2. Zero hungerGenetics0303 health sciencesEndosymbiontGenomebiologyfungifood and beveragesHigh-Throughput Nucleotide SequencingDNASequence Analysis DNAVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationEnterobacteriaceaeHemipteraWhiteflyComplementationHalomonadaceaeGlobal distribution[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Genome BacterialMetabolic Networks and PathwaysBiotechnologyResearch ArticleBMC Genomics
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The combined action of 9 lipoxygenase and galactolipase is sufficient to bring about programmed cell death during tobacco hypersensitive response

2005

International audience; Oxylipins, derived from fatty acid hydroperoxides (FAHs), are thought to play different roles during plant pathogen interactions. During hypersensitive response (HR) some of them serve as signals necessary for defence gene activation whereas others could contribute to pathogen killing or could participate in the execution of plant programmed cell death (PCD) associated with this resistance. In order to address the role of these compounds in the latter process, we have closely observed lipid peroxidation, the first step of this metabolic pathway, under different situations which led either to accelerated or inhibited HR cell death. The oxidative process has been studi…

0106 biological sciencesHypersensitive responseProgrammed cell deathPhysiologyPlant ScienceBiologyGALACTOLIPASE01 natural sciencesLipid peroxidation03 medical and health scienceschemistry.chemical_compoundLipoxygenaseRALSTONIA SOLANACEARUMGalactolipasePATATINUnsaturated fatty acid030304 developmental biologyHYPERSENSITIVE RESPONSE[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesTOBACCOfood and beveragesPROGRAMMED CELL DEATH[SDV.EE] Life Sciences [q-bio]/Ecology environmentMetabolic pathwayLIPID PEROXYDATIONBiochemistrychemistryApoptosisbiology.protein010606 plant biology & botany
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Retroconversion of docosapentaenoic acid (n-6): an alternative pathway for biosynthesis of arachidonic acid in Daphnia magna.

2013

The aim of this study was to assess metabolic pathways for arachidonic acid (20:4n-6) biosynthesis in Daphnia magna. Neonates of D. magna were maintained on [13C] enriched Scenedesmus obliquus and supplemented with liposomes that contained separate treatments of unlabeled docosapentaenoic acid (22:5n-6), 20:4n-6, linoleic acid (18:2n-6) or oleic acid (18:1n-9). Daphnia in the control treatment, without any supplementary fatty acids (FA) containing only trace amounts of 20:4n-6 (~0.3 % of all FA). As expected, the highest proportion of 20:4n-6 (~6.3 %) was detected in Daphnia that received liposomes supplemented with this FA. Higher availability of 18:2n-6 in the diet increased the proportio…

0106 biological sciencesLinoleic acidDaphnia magna01 natural sciencesBiochemistryDaphnia03 medical and health scienceschemistry.chemical_compoundAnimalsreproductive and urinary physiology030304 developmental biologychemistry.chemical_classification0303 health sciencesArachidonic Acidbiology010604 marine biology & hydrobiologyfungiOrganic ChemistryDocosapentaenoic Acid n-6Cell Biologybiology.organism_classificationLipid MetabolismBiosynthetic PathwaysOleic acidBiochemistrychemistryDaphniaLiposomesFatty Acids UnsaturatedArachidonic acidDocosapentaenoic acidHydrogenationPolyunsaturated fatty acidLipids
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Nitric Oxide in Plants: Production and Cross-talk with Ca2+ Signaling

2008

International audience; Nitric oxide (NO) is a diatomic gas that performs crucial functions in a wide array of physiological processes in animals. The past several years have revealed much about its roles in plants. It is well established that NO is synthesized from nitrite by nitrate reductase (NR) and via chemical pathways. There is increasing evidence for the occurrence of an alternative pathway in which NO production is catalysed from L-arginine by a so far non-identified enzyme. Contradictory results have been reported regarding the respective involvement of these enzymes in specific physiological conditions. Although much remains to be proved, we assume that these inconsistencies can …

0106 biological sciencesMAPK/ERK pathwayArabidopsisPlant ScienceCalcium-Transporting ATPasesBiologyNitrate reductaseArginine01 natural sciencesPlant Physiological PhenomenaNitrate ReductaseNitric oxide03 medical and health scienceschemistry.chemical_compoundNitrateProtein kinasesNitrilesAnimals[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyNitriteMolecular BiologyNitritesPlant Physiological Phenomena030304 developmental biologyMammals0303 health sciencesKinasefungiNitric oxidechemistryBiochemistrySecond messenger systemCitrullineCalciumCryptogeinNitric Oxide SynthaseGenome Plant010606 plant biology & botanySignal Transduction
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Activation of a nuclear-localized SIPK in tobacco cells challenged by cryptogein, an elicitor of plant defence reactions.

2009

When a plant cell is challenged by a well-defined stimulus, complex signal transduction pathways are activated to promote the modulation of specific sets of genes and eventually to develop adaptive responses. In this context, protein phosphorylation plays a fundamental role through the activation of multiple protein kinase families. Although the involvement of protein kinases at the plasma membrane and cytosolic levels are now well-documented, their nuclear counterparts are still poorly investigated. In the field of plant defence reactions, no known study has yet reported the activation of a nuclear protein kinase and/or its nuclear activity in plant cells, although some protein kinases, e.…

0106 biological sciencesMAPK/ERK pathwayMolecular Sequence DataActive Transport Cell NucleusBiology01 natural sciencesBiochemistryMAP2K703 medical and health sciencesCytosolTobaccoASK1Protein phosphorylation[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceNuclear proteinProtein kinase AMolecular BiologyConserved Sequence030304 developmental biologyPlant ProteinsCell Nucleus0303 health sciencesKinasePlant ExtractsAlgal ProteinsLife SciencesCell BiologyCell biologyEnzyme ActivationBiochemistrySignal transductionMitogen-Activated Protein KinasesSequence Alignment010606 plant biology & botanySignal TransductionThe Biochemical journal
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