Search results for "PC"

showing 10 items of 2805 documents

Sensitive measure of prevalence and parasitaemia of haemosporidia from European blackbird (Turdus merula) populations: value of PCR-RFLP and quantita…

2006

8 pages; International audience; Haemosporidian parasites are common in birds in which they act as an important selective pressure. While most studies so far have focused on the effect of their prevalence on host life-history traits, no study has measured the effect of parasitaemia. We developed molecular methods to detect, identify and quantify haemosporidia in 2 natural populations of the Blackbird Turdus merula. Three different parasite genotypes were found - 1 Haemoproteus and 2 Plasmodium. A PCR-RFLP screening revealed that only approximately 3% of blackbirds were free of parasites, compared to the 34% of uninfected birds estimated by blood smear screening. A quantitative PCR (q-PCR) a…

0106 biological sciencesPlasmodiumMESH: ParasitemiaMESH: Protozoan Infections AnimalMESH : Protozoan Infections AnimalMESH : PrevalenceMESH : Bird DiseasesMESH : ParasitemiaParasitemia01 natural sciencesPlasmodiumPolymerase Chain ReactionMESH: Bird Diseases030308 mycology & parasitologylaw.inventionPCR-RFLPlawGenotype[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingMESH: AnimalsPasseriformesProtozoan Infections AnimalMESH : Polymerase Chain ReactionPolymerase chain reactionGenetics0303 health sciencesbiologyInfectious DiseasesMESH: HaemosporidaMESH : Sensitivity and SpecificityPolymorphism Restriction Fragment Length[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitologyfield populationsprevalenceZoology010603 evolutionary biologySensitivity and SpecificityparasitaemiaApicomplexa03 medical and health sciencesparasitic diseasesAnimalsTurdus merula[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyMESH: PrevalenceMESH : Polymorphism Restriction Fragment Length[SDV.GEN]Life Sciences [q-bio]/GeneticsHost (biology)Bird DiseasesMESH: PlasmodiumMESH: Polymorphism Restriction Fragment LengthMESH: PasseriformesMESH: Polymerase Chain Reactionbiology.organism_classificationHaemosporidaMESH : PasseriformesMESH: Sensitivity and SpecificityMESH : PlasmodiumHaemoproteusVector (epidemiology)Animal Science and ZoologyParasitologyHaemoproteusMESH : AnimalsMESH : Haemosporida[ SDV.GEN ] Life Sciences [q-bio]/Geneticsreal-time PCR[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Floral Color, Anthocyanin Synthesis Gene Expression and Control in Cape Erica Species

2019

Introduction: The Cape Floristic Region (CFR) is a biodiversity hotspot, recognized globally for its unusually high levels of endemism. The origins of this biodiversity are a long-standing topic of research. The largest “Cape clade,” Erica, radiated dramatically in the CFR, its ca. 690 species arising within 10–15 Ma. Notable between- and within-species flower color variation in Erica may have contributed to the origins of species diversity through its impact on pollinator efficiency and specificity. Methods: We investigate the expression and function of the genes of the anthocyanin biosynthesis pathway that controls floral color in 12 Erica species groups using RT-qPCR and UPLC-MS/MS. Resu…

0106 biological sciencesRT-qPCRBiodiversitySpecies diversityPlant ScienceBiologylcsh:Plant culture010603 evolutionary biology01 natural sciencesBiodiversity hotspotanthocyaninWhite (mutation)PollinatorEvolutionary biologyUPLC-MS/MSgene expressionlcsh:SB1-1110EndemismCladefloral colorGeneEricaOriginal Research010606 plant biology & botanyFrontiers in Plant Science
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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Temporal fluctuations in seawater pCO2 may be as important as mean differences when determining physiological sensitivity in natural systems

2015

AbstractMost studies assessing the impacts of ocean acidification (OA) on benthic marine invertebrates have used stable mean pH/pCO2 levels to highlight variation in the physiological sensitivities in a range of taxa. However, many marine environments experience natural fluctuations in carbonate chemistry, and to date little attempt has been made to understand the effect of naturally fluctuating seawater pCO2 (pCO2sw) on the physiological capacity of organisms to maintain acid–base homeostasis. Here, for the first time, we exposed two species of sea urchin with different acid–base tolerances, Paracentrotus lividus and Arbacia lixula, to naturally fluctuating pCO2sw conditions at shallow wat…

0106 biological sciencesSea urchin010504 meteorology & atmospheric sciencesAcid-base balanceEcologyChemistry010604 marine biology & hydrobiologyOcean acidificationVolcanic ventOcean acidificationAquatic ScienceAtmospheric sciencesOceanography01 natural sciencesEcology Evolution Behavior and SystematicpCO2Natural (archaeology)OceanographyAquatic scienceSeawaterNatural variabilitySensitivity (control systems)Natural variabilityEcology Evolution Behavior and Systematics0105 earth and related environmental sciences
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Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities.

2013

To reduce the negative effect of climate change on Biodiversity, the use of geological CO2 sequestration has been proposed; however leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2, we investigated the acid-base and ion regulatory responses, as well as the density, of sea urchins living around CO2 vents at Vulcano, Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore, we show that even in cl…

0106 biological sciencesSettore BIO/07 - EcologiaGeological Phenomena010504 meteorology & atmospheric sciencesClimate ChangeSpecies distributionBiodiversityMarine lifeAquatic ScienceOceanography01 natural sciencesParacentrotus lividushowever leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2 we investigated the acid-base and ion regulatory responses as well as the density of sea urchins living around CO2 vents at Vulcano Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore we show that even in closely-related taxa divergent physiological capabilities underlie differences in taxa distribution around the CO2 vent. It is concluded that species distribution under the sort of elevated CO2 conditions occurring with leakages from geological storages and future ocean acidification scenarios may partly be determined by quite subtle physiological differentiation.Mediterranean seaBenthosAnimalsSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyTo reduce the negative effect of climate change on Biodiversity the use of geological CO2 sequestration has been proposedOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationAdaptation PhysiologicalPollutionTransplantationOceanographyItaly13. Climate actionSea UrchinsWater Pollutants Chemical
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Raspberry breeding and biotisation for increasing plant stress tolerance and antioxidant activity

2008

International audience; Chemical inputs used in red fruit production can be detrimental to the environment and pesticides are not always efficient in controlling plant diseases. In addition, it is suspected that conventional agricultural practices have a negative impact on antioxidant activities in red fruits. Therefore new cultural approaches are required in order to produce red fruits of high quality. This involves an integrated programme of plant breeding and development of sustainable agricultural practices. Antioxidant activity was compared in leaves and berries of six raspberry cultivars for the selection of varieties for a breeding programme. This showed that cultivars that had the h…

0106 biological sciences[SDE] Environmental SciencesAntioxidantmedicine.medical_treatment[SDV]Life Sciences [q-bio]HorticultureBiologyFRAMBOISIER01 natural sciencesAcclimatizationARBUSCULAR MYCORRHIZAL FUNGIFight-or-flight responseMycorrhizal fungimedicineCultivarRELATION PLANTE-MICROORGANISMEWater content2. Zero hungerfungifood and beverages04 agricultural and veterinary sciences15. Life on landPCR DIAGNOSTICSBlowing a raspberry[SDV] Life Sciences [q-bio]Plant developmentHorticultureAgronomyBIOTISATION[SDE]Environmental Sciences040103 agronomy & agriculturePHYTOPHTHORA FRAGARIAE VAR.RUBI0401 agriculture forestry and fisheries010606 plant biology & botany
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Essential oil variability in a collection of Ocimum basilicum L. (basil) cultivars.

2016

Ocimum basilicum L. (Lamiaceae) is an aromatic plant of great tradition in the Mediterranean area. Its economic importance is growing up determining an expansion of cultivation. This paper evaluated the morphological traits, the chemical profiles, and antibacterial activity of 21 cultivars of basil belonging to Ê»Genoveseʼ, Ê»Napoletanoʼ, and Ê»Purple basilʼ types. The cultivars were characterized by different growth rate and morphological traits. The chemical composition of the oils analyzed by GC and GC/MS analysis, supported by the PCA analysis, underlined the strong influence of chemotype. It is noteworthy that estragole, never present in Genovese and purple basil types, occurred in …

0106 biological sciencesfood.ingredientPCA analysisBioengineeringMicrobial Sensitivity TestsBiologyGram-Positive Bacteria01 natural sciencesBiochemistrychemistry.chemical_compoundStructure-Activity Relationship0404 agricultural biotechnologyfoodLinaloolMethyl eugenolOcimum basilicum LBiomorphological characteristicAnti-Bacterial AgentBotanyGram-Negative BacteriaAntibacterial activitiesOils VolatileBiomorphological characteristicsMolecular BiologyEssential-oil constituentChemotypeDose-Response Relationship DrugMicrobial Sensitivity TestChemistry (all)Basilicumfood and beveragesEssential-oil constituents04 agricultural and veterinary sciencesGeneral ChemistryGeneral MedicineOcimumbiology.organism_classification040401 food scienceAnti-Bacterial AgentsEugenolchemistryOcimum basilicumMolecular MedicineAntibacterial activitieEstragoleLamiaceaeAntibacterial activities; Biomorphological characteristics; Essential-oil constituents; Ocimum basilicum L.; PCA analysisPCA analysi010606 plant biology & botany
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Optimization of Synthetic Media Composition for Kluyveromyces marxianus Fed-Batch Cultivation

2021

The Kluyveromyces marxianus yeast recently has gained considerable attention due to its applicability in high-value-added product manufacturing. In order to intensify the biosynthesis rate of a target product, reaching high biomass concentrations in the reaction medium is mandatory. Fed-batch processes are an attractive and efficient way how to achieve high cell densities. However, depending on the physiology of the particular microbial strain, an optimal media composition should be used to avoid by-product synthesis and, subsequently, a decrease in overall process effi-ciency. Thus, the aim of the present study was to optimise the synthetic growth medium and feeding solution compositions (…

0106 biological sciencesmodel predictive control (MPC)BiomassPlant Science<i>Kluyveromyces marxianus</i>; 2-phenylethanol; fed-batch; cultivation; bioreactor; model predictive control (MPC)01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)03 medical and health scienceschemistry.chemical_compoundbioreactorKluyveromyces marxianusfed-batch010608 biotechnologyBioreactorFood science030304 developmental biology0303 health sciencesGrowth mediumlcsh:TP500-660biologyChemistrySubstrate (chemistry)biology.organism_classificationlcsh:Fermentation industries. Beverages. AlcoholYeastcultivationYield (chemistry)Composition (visual arts)<i>Kluyveromyces marxianus</i>Food Science2-phenylethanolFermentation
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Metaheuristic procedures for the lexicographic bottleneck assembly line balancing problem

2015

The goal of this work is to develop an improved procedure for the solution of the lexicographic bottleneck variant of the assembly line balancing problem (LB-ALBP). The objective of the LB-ALBP is to minimize the workload of the most heavily loaded workstation, followed by the workload of the second most heavily loaded workstation and so on. This problem-recently introduced to the literature (Pastor, 2011)-has practical relevance to manufacturing facilities. We design, implement and fine-tune GRASP, tabu search (TS) and scatter search (SS) heuristics for the LB-ALBP and show that our procedures are able to obtain solutions of a quality that outperforms previous approaches. We rely on both s…

0209 industrial biotechnologyMathematical optimizationComputer scienceStrategy and Management0211 other engineering and technologiesassembly line balancingheuristics02 engineering and technologyManagement Science and Operations ResearchHeuristic algorithms.BottleneckManagement Information Systemslb-albp020901 industrial engineering & automation:Economia i organització d'empreses [Àrees temàtiques de la UPC]Genetic algorithmgenetic algorithmMetaheuristicsearchMarketingmetaheuristicsmodel021103 operations researchGRASPWorkloadTabu searchmultiplelexicographic bottleneckProgramació heurísticanetworkHeuristicsTreball en cadenaJournal of the Operational Research Society
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Vibration control strategy for large-scale structures with incomplete multi-actuator system and neighbouring state information

2016

The synthesis of optimal controllers for vibrational protection of large-scale structures with multiple actuation devices and partial state information is a challenging problem. In this study, the authors present a design strategy that allows computing this kind of controllers by using standard linear matrix inequality optimisation tools. To illustrate the main elements of the new approach, a five-story structure equipped with two interstory actuation devices and subjected to a seismic disturbance is considered. For this control setup, three different controllers are designed: an ideal state-feedback H 8 controller with full access to the complete state information and two static output-fee…

0209 industrial biotechnologyPeak ground accelerationEngineeringLarge-scale controlControl and OptimizationScale (ratio):Informàtica::Automàtica i control [Àrees temàtiques de la UPC]Vibration controlFull scaleEdificis -- Vibració020101 civil engineering:Enginyeria civil::Materials i estructures [Àrees temàtiques de la UPC]02 engineering and technologyDesign strategyFeedback control systems0201 civil engineeringStructural vibration controlControl d'estructures (Enginyeria)020901 industrial engineering & automationControl theoryLMI optimizationBuildings -- VibrationElectrical and Electronic Engineeringbusiness.industryPartial state informationLinear matrix inequalityControl engineeringComputer Science Applications1707 Computer Vision and Pattern RecognitionComputer Science ApplicationsHuman-Computer InteractionControl and Systems Engineering; Electrical and Electronic Engineering; Human-Computer Interaction; Computer Science Applications1707 Computer Vision and Pattern Recognition; Control and OptimizationControl and Systems EngineeringSistemes de control per retroaccióBuildings--VibrationStructural control (Engineering)ActuatorbusinessStatic output-feedback control
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