Search results for "PES"

showing 10 items of 5212 documents

The Greenland shark Somniosus microcephalus—Hemoglobins and ligand-binding properties

2017

A large amount of data is currently available on the adaptive mechanisms of polar bony fish hemoglobins, but structural information on those of cartilaginous species is scarce. This study presents the first characterisation of the hemoglobin system of one of the longest-living vertebrate species (392 +/- 120 years), the Arctic shark Somniosus microcephalus. Three major hemoglobins are found in its red blood cells and are made of two copies of the same a globin combined with two copies of three very similar beta subunits. The three hemoglobins show very similar oxygenation and carbonylation properties, which are unaffected by urea, a very important compound in marine elasmobranch physiology.…

---0301 basic medicinegenetic structuresProtein ConformationGreenlandlcsh:MedicineRESONANCE RAMAN-SPECTRAHETERODONTUS-PORTUSJACKSONISpectrum Analysis RamanBiochemistrychemistry.chemical_compoundHemoglobinsProtein structureAMINO-ACID SEQUENCEAnimal CellsSequence Analysis ProteinRed Blood CellsUreaNOTOTHENIOID FISHESPost-Translational Modificationlcsh:ScienceHemeChondrichthyesMultidisciplinarybiologyChemistryOrganic CompoundsChemical ReactionsVertebrateEukaryotaMOLECULAR ADAPTATIONSMicrocephalusGlobinsChemistryBiochemistryOptical EquipmentVertebratesPhysical SciencesEngineering and TechnologyCellular TypesResearch ArticleEnvironmental MonitoringProtein BindingQUATERNARY STRUCTURESAllosteric regulationEquipmentSTRETCHING FREQUENCIESHeme03 medical and health sciencesOXYGEN-BINDINGbiology.animalAnimals14. Life underwaterGlobinHemoglobinPhotolysisBlood Cells030102 biochemistry & molecular biologyLaserslcsh:ROrganic ChemistryOrganismsChemical CompoundsBiology and Life SciencesProteinsxxxCell Biologybiology.organism_classificationCARTILAGINOUS FISHOxygen030104 developmental biologySomniosusFishSharkslcsh:QHemoglobinProtein MultimerizationELASMOBRANCH HEMOGLOBINElasmobranchiiPLoS ONE
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Heavy enzymes and the rational redesign of protein catalysts

2019

Abstract An unsolved mystery in biology concerns the link between enzyme catalysis and protein motions. Comparison between isotopically labelled “heavy” dihydrofolate reductases and their natural‐abundance counterparts has suggested that the coupling of protein motions to the chemistry of the catalysed reaction is minimised in the case of hydride transfer. In alcohol dehydrogenases, unnatural, bulky substrates that induce additional electrostatic rearrangements of the active site enhance coupled motions. This finding could provide a new route to engineering enzymes with altered substrate specificity, because amino acid residues responsible for dynamic coupling with a given substrate present…

010402 general chemistryProtein Engineering01 natural sciencesBiochemistryCatalysisEnzyme catalysisisotope effectsCatalytic DomainDihydrofolate reductaseMolecular BiologyAlcohol dehydrogenasechemistry.chemical_classificationalcohol dehydrogenasesCarbon Isotopesdihydrofolate reductasesbiologyBacteriaNitrogen Isotopes010405 organic chemistryConceptOrganic ChemistryAlcohol DehydrogenaseActive siteSubstrate (chemistry)Protein engineeringDeuteriumCombinatorial chemistrymolecular dynamics0104 chemical sciencesKineticsTetrahydrofolate Dehydrogenaseenzyme engineeringEnzymechemistrybiology.proteinBiocatalysisMolecular MedicineConcepts
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Annually resolved δ13Cshell chronologies of long-lived bivalve mollusks (Arctica islandica) reveal oceanic carbon dynamics in the temperate North Atl…

2011

Abstract The ability of the ocean to absorb carbon dioxide is likely to be adversely affected by recent climate change. However, relatively little is known about the spatiotemporal variability in the oceanic carbon cycle due to the lack of long-term, high-resolution dissolved inorganic carbon isotope ( δ 13 C DIC ) data, especially for the temperate North Atlantic, which is the major oceanic sink for anthropogenic CO 2 . Here, we report shell carbon isotope values ( δ 13 C shell ), a potential proxy for δ 13 C DIC , of old-grown specimens of the long-lived bivalve mollusk, Arctica islandica . This paper presents the first absolutely dated, annually resolved δ 13 C shell record from surface …

010504 meteorology & atmospheric sciences010502 geochemistry & geophysicsOceanography01 natural sciencesCarbon cycleSuess effectSclerochronologySclerochronology14. Life underwaterArctica islandicaEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesEarth-Surface ProcessesPolar frontStable carbon isotope ratiobiologyOcean currentOceanic Suess effectPaleontologybiology.organism_classificationDissolved inorganic carbonOceanographyCarbon dioxide13. Climate actionIsotopes of carbon[SDE]Environmental SciencesOceanic carbon cycleGeology
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Diagenetic stability of non-traditional stable isotope systems (Ca, Sr, Mg, Zn) in teeth – An in-vitro alteration experiment of biogenic apatite in i…

2021

Stable isotope ratios and trace element concentrations of fossil bones and teeth are important geochemical proxies for the reconstruction of diet and past environment in archaeology and palaeontology. However, since diagenesis can significantly alter primary diet-related isotope signatures and elemental compositions, it is important to understand and quantify alteration processes. Here, we present the results of in-vitro alteration experiments of dental tissues from a modern African elephant molar reacted in aqueous solutions at 30 °C and 90 °C for 4 to 63 days. Dental cubes with ≈ 3 mm edge length, comprising both enamel and dentin, were placed into 2 mL of acidic aqueous sol…

010504 meteorology & atmospheric sciencesAnalytical chemistry010502 geochemistry & geophysics01 natural sciencesApatiteDiagenesischemistry.chemical_compoundstomatognathic systemIsotopesGeochemistry and PetrologyDentinmedicineBioapatite0105 earth and related environmental sciencesIsotopeEnamel paintStable isotope ratioTrace elementLA-(MC-)ICP-MSGeologyHydroxylapatitestomatognathic diseasesmedicine.anatomical_structurechemistry13. Climate actionvisual_artRaman spectroscopyvisual_art.visual_art_mediumEPMAGeologyEMPA
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Inter-annual climate variability in Europe during the Oligocene icehouse

2017

Abstract New sclerochronological data suggest that a variability comparable to the North Atlantic Oscillation (NAO) was already present during the middle Oligocene, about 20 Myr earlier than formerly assumed. Annual increment width data of long-lived marine bivalves of Oligocene (30–25 Ma) strata from Central Europe revealed a distinct quasi-decadal climate variability modulated on 2–12 (mainly 3–7) year cycles. As in many other modern bivalves, these periodic changes in shell growth were most likely related to changes in primary productivity, which in turn, were coupled to atmospheric circulation patterns. Stable carbon isotope values of the shells (δ 13 C shell ) further corroborated the …

010504 meteorology & atmospheric sciencesAtmospheric circulationPaleontology010502 geochemistry & geophysicsOceanography01 natural sciencesProxy (climate)Oceanography13. Climate actionNorth Atlantic oscillationIsotopes of carbonSclerochronologyClimatologyClimate model14. Life underwaterClimate stateCenozoicEcology Evolution Behavior and SystematicsGeology0105 earth and related environmental sciencesEarth-Surface ProcessesPalaeogeography, Palaeoclimatology, Palaeoecology
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Environmental and biological factors are joint drivers of mercury biomagnification in subarctic lake food webs along a climate and productivity gradi…

2021

Subarctic lakes are getting warmer and more productive due to the joint effects of climate change and intensive land-use practices (e.g. forest clear-cutting and peatland ditching), processes that potentially increase leaching of peat- and soil-stored mercury into lake ecosystems. We sampled biotic communities from primary producers (algae) to top consumers (piscivorous fish), in 19 subarctic lakes situated on a latitudinal (69.0-66.5 degrees N), climatic (+3.2 degrees C temperature and +30% precipitation from north to south) and catchment land-use (pristine to intensive forestry areas) gradient. We first tested how the joint effects of climate and productivity influence mercury biomagnific…

010504 meteorology & atmospheric sciencesBiomagnificationTROPHIC POSITIONmaankäyttö010501 environmental sciencesMETHYLMERCURY01 natural sciencesFood chainBiological FactorsONTARIO LAKESCHAIN STRUCTUREClimate changeympäristömyrkytWaste Management and DisposalLand-useApex predatorTrophic levelkalatStable isotopes2. Zero hungerFRESH-WATEREcologyFishesvesiekosysteemitBIOACCUMULATIONselkärangattomatPollutionSubarctic climateclimate changeProductivity (ecology)Environmental MonitoringFood chain lengthEnvironmental EngineeringFood Chainelohopeachemistry.chemical_elementstable isotopeskasautuminenWHITEFISHland-useEnvironmental ChemistryAnimalsravintoketjutEcosystem1172 Environmental sciences0105 earth and related environmental sciencesfishfood chain lengthLake ecosystemMercury15. Life on landilmastonmuutoksetCHARR SALVELINUS-ALPINUSinvertebratesInvertebratesMercury (element)LakesFishchemistryisotooppianalyysi13. Climate actionEnvironmental scienceMARINEWater Pollutants Chemical
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Changements environnementaux survenant à la limite Oligocène/Miocène du bassin des Limagnes (Massif central, France).

2018

16 pages; International audience; Continental environments are very sensitive to climatic variations. A unique opportunity to study the climate changes around the Oligocene/Miocene boundary is offered by the Limagne graben Basin (France) where this stage boundary is well constrained by fossils. Indeed, some localities of the Limagne Graben Basin are so rich in mammal remains that they have become a European reference for mammal biostratigraphy. The dominant sedimentary facies of the lacustrine deposits in the northern part of the Limagne Graben Basin are composed of poorly cemented marls and calcarenites containing various plants and animals remains (e.g. algae, fish bones and teeth, gastro…

010504 meteorology & atmospheric sciencesContext (language use)Biostratigraphy010502 geochemistry & geophysics01 natural sciencesPaleontology[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistrycarbonates lacustresMarl14. Life underwaterstromatolitebassin des Limagnes0105 earth and related environmental sciencesPalynologygeographygeography.geographical_feature_categoryLimagne Basinisotopes de l’oxygènebiologylimite oligo-miocèneoxygen isotopeslcsh:QE1-996.5GeologyMassif15. Life on landbiology.organism_classificationlacustrine carbonateGrabenlcsh:GeologyStromatolite13. Climate action[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyapatitePeriod (geology)Oligocene/Miocene boundarybiozoneGeologyBSGF - Earth Sciences Bulletin
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Interpretation of the nitrogen isotopic composition of Precambrian sedimentary rocks: Assumptions and perspectives

2016

International audience; Nitrogen isotope compositions in sedimentary rocks (d(15)N(sed)) are routinely used for reconstructing Cenozoic N-biogeochemical cycling and are also being increasingly applied to understanding the evolution of ancient environments. Here we review the existing knowledge and rationale behind the use of d(15)N(sed) as a proxy for the Precambrian N-biogeochemical cycle with the aims of (i) identifying the major uncertainties that affect analyses and interpretation of nitrogen isotopes in ancient sedimentary rocks, (ii) developing a framework for interpreting the Precambrian d(15)N(sed) record, (iii) testing this framework against a database of Precambrian d(15)N(sed) va…

010504 meteorology & atmospheric sciencesEarth scienceNitrogen isotopesMetamorphismGeologyNitrogen biogeochemical cycle010502 geochemistry & geophysicsEarly Earth01 natural sciencesIsotopes of nitrogenDiagenesisPaleontologyPrecambrianGeologic time scale13. Climate actionGeochemistry and Petrology[SDU]Sciences of the Universe [physics]Ocean oxygenationSedimentary rock14. Life underwaterPrecambrianCenozoicGeology[ SDU ] Sciences of the Universe [physics]0105 earth and related environmental sciences
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Essential features of the polytypic charoite-96 structure compared to charoite-90

2011

AbstractCharoite, ideally (K,Sr,Ba,Mn)15–16(Ca,Na)32[(Si70(O,OH)180)](OH,F)4·nH20, is a rock-forming mineral from the Murun massif in Yakutia, Sakha Republic, Siberia, Russia, where it occurs in a unique alkaline intrusion. Charoite occurs as four different polytypes, which are commonly intergrown in nanocrystallme fibres. We report the structure of charoite-96(a =32.11(6),b =19.77(4),c =7.23(1) Å, β = 95.85(9)°,V =4565(24) Å3, space groupP21/m),which was solvedab initioby direct methods on the basis of 2676 unique electron diffraction reflections collected by automated diffraction tomography and refined toR1/wR2=0.34/0.37. The structure of charoite-96 is related to that of the charoite-90,…

010504 meteorology & atmospheric sciencesElectron crystallographyAb initiocrystal structure analysisengineering.material010502 geochemistry & geophysicscharoite polytypes01 natural sciencesSilicateNanocrystalline materialchemistry.chemical_compoundCrystallographyelectron crystallographychemistryOctahedronElectron diffractionGeochemistry and PetrologyGroup (periodic table)Charoitecharoite polytypes; crystal structure analysis; electron crystallography; electron diffraction; electron diffraction tomographyengineeringelectron diffractionelectron diffraction tomography0105 earth and related environmental sciences
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Pesticides and Agricultural Air Quality

2016

010504 meteorology & atmospheric sciencesEnvironmental protectionAgriculturebusiness.industryEnvironmental chemistryEnvironmental science010501 environmental sciencesPesticideRisk assessmentbusiness01 natural sciencesAir quality index0105 earth and related environmental sciences
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