Search results for "PLASMA"

Direct quantification of cell-free, circulating DNA from unpurified plasma.

2014

Cell-free DNA (cfDNA) in body tissues or fluids is extensively investigated in clinical medicine and other research fields. In this article we provide a direct quantitative real-time PCR (qPCR) as a sensitive tool for the measurement of cfDNA from plasma without previous DNA extraction, which is known to be accompanied by a reduction of DNA yield. The primer sets were designed to amplify a 90 and 222 bp multi-locus L1PA2 sequence. In the first module, cfDNA concentrations in unpurified plasma were compared to cfDNA concentrations in the eluate and the flow-through of the QIAamp DNA Blood Mini Kit and in the eluate of a phenol-chloroform isoamyl (PCI) based DNA extraction, to elucidate the D…

The metal binding abilities of Megathura crenulata metallothionein (McMT) in the frame of gastropoda MTs.

2011

Metallothioneins (MTs) are proteins that play a major role in metal homeostasis and/or detoxification in all kind of organisms. The MT gene/protein system of gastropod molluscs provides an invaluable model to study the diversification mechanisms that have enabled MTs to achieve metal-binding specificity through evolution. Most pulmonate gastropods, particularly terrestrial snails, harbor three paralogous isogenes encoding three MT isoforms with different metal binding preferences: the highly specific CdMT and CuMT isoforms, for cadmium and copper respectively, and the unspecific Cd/CuMT isoform. Megathura crenulata is a non-pulmonate gastropod in which only one MT isogene has so far been re…

Prevalence of high molecular weight apoprotein(a) isoforms in subjects with very low plasma levels of Lipoprotein(a)

2000

Influence of muscle strength and total work on exercise-induced plasma growth hormone isoforms in women

2003

The purpose of this investigation was to determine the influence of physical strength and the ability to do more total work on human growth hormone (GH) variants to a heavy resistance exercise protocol in untrained women. From a distribution of 100 healthy, untrained women, the strongest 10 women (S) and the weakest 10 women (W) were compared for GH responses pre- and post an acute heavy resistance exercise test (AHRET, 6 sets of 10 RM squats, 2 minutes rest between sets). Blood samples were obtained pre-exercise and immediately post-exercise and subsequently analysed in total as well as fractionated by Sephacryl S-100R column chromatography into three molecular weight size classes: fractio…

A High-Resolution Penalization Method for large Mach number Flows in the presence of Obstacles

2009

International audience; A penalization method is applied to model the interaction of large Mach number compressible flows with obstacles. A supplementary term is added to the compressible Navier-Stokes system, seeking to simulate the effect of the Brinkman-penalization technique used in incompressible flow simulations including obstacles. We present a computational study comparing numerical results obtained with this method to theoretical results and to simulations with Fluent software. Our work indicates that this technique can be very promising in applications to complex flows.

A Language and Platform Independent Co-Simulation Framework Based on the Functional Mock-Up Interface

2019

The main goal of the Functional Mock-up Interface (FMI) standard is to allow the sharing of simulation models across tools. To accomplish this, FMI relies on a combination of XML-files and compiled C-code packaged in a zip archive. This archive is called a Functional Mock-up Unit (FMU). In theory, an FMU can support multiple platforms, but not necessarily in practice. Furthermore, software libraries for interacting with FMUs may not be available in a particular language or platform. Another issue is related to the protection of intellectual property (IP). While an FMU is free to only provide the C-code in its binary form, other resources within the FMU may be unprotected. Distributing model…

A prospect for computing in porous materials research: Very large fluid flow simulations

2016

Abstract Properties of porous materials, abundant both in nature and industry, have broad influences on societies via, e.g. oil recovery, erosion, and propagation of pollutants. The internal structure of many porous materials involves multiple scales which hinders research on the relation between structure and transport properties: typically laboratory experiments cannot distinguish contributions from individual scales while computer simulations cannot capture multiple scales due to limited capabilities. Thus the question arises how large domain sizes can in fact be simulated with modern computers. This question is here addressed using a realistic test case; it is demonstrated that current …

Implicit-explicit and explicit projection schemes for the unsteady incompressible Navier–Stokes equations using a high-order dG method

2017

Abstract A modified version of the projection scheme [19] is proposed, which does not show a lower limit for the time step in contrast to the limits of stability observed numerically for some projection type schemes. An advantage of the proposed scheme is that the right-hand side of the Poisson equation for the pressure is independent of the time step. An explicit version of the current scheme is also provided besides the implicit-explicit one. For the implicit-explicit version, we retain divergence of the viscous terms on the right-hand side of the Poisson equation in order to achieve a higher accuracy for low Reynolds number flows. In this way, we also ensure that the Poisson equation wit…

Smoothed particles hydrodynamics numerical simulations of droplets walking on viscous vibrating liquid

2016

We study the phenomenon of the "walking droplet", by means of numerical fluid dynamics simulations using the Smoothed Particle Hydrodynamics numerical method. This phenomenon occurs when a millimetric drop is released on the surface of an oil of the same composition, contained in a tank and subjected to vertical oscillations of frequency and amplitude very close to the Faraday instability threshold. At appropriate values of the parameters of the system under study, the oil droplet jumps permanently on the surface of the vibrating liquid forming a localized wave-particle system, reminding the behaviour of a wave particle quantum system as suggested by de Broglie. In our study, we made releva…

Modelling the carbon Snoek peak in ferrite: Coupling molecular dynamics and kinetic Monte-Carlo simulations

2008

Abstract Molecular statics, molecular dynamics and kinetic Monte-Carlo are used to model the carbon Snoek peak in ferrite. Using an interatomic EAM potential for the Fe–C system, saddle point energies for the diffusion of carbon have been evaluated under uniaxial stress by molecular statics. These energies have been reintroduced in a kinetic Monte-Carlo scheme to predict the repartition of carbon atoms in different octahedral sites. This repartition leads to an anelastic deformation calculated by molecular dynamics, which causes internal friction (the Snoek peak) for cyclic stress. This approach leads to quantitative predictions of the internal friction, which are in good agreement with exp…