Search results for "POPULATION DYNAMICS"

showing 10 items of 281 documents

Detection and Characterization of Wolbachia Infections in Natural Populations of Aphids: Is the Hidden Diversity Fully Unraveled?

2011

Copyright © 2011 Augustinos et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Aphids are a serious threat to agriculture, despite being a rather small group of insects. The about 4,000 species worldwide engage in highly interesting and complex relationships with their microbial fauna. One of the key symbionts in arthropods is Wolbachia, an a-Proteobacterium implicated in many important biological processes and believed to be a potential tool for biological control. Aphids were thought not to harbour W…

0106 biological sciences[SDV]Life Sciences [q-bio]FaunaPopulation DynamicsBiological pest controllcsh:MedicineWolbachia InfectionsPolymerase Chain Reaction01 natural sciencesRNA Ribosomal 16SGenotypelcsh:SciencePhylogenyreproductive and urinary physiologyGenetics0303 health sciencesMultidisciplinaryfood and beveragesAgricultureWolbachiaWolbachiaResearch ArticleGenotypeMolecular Sequence DataAgro-Population EcologyZoologyBiologyDNA RibosomalMicrobiology010603 evolutionary biologyMicrobial Ecology03 medical and health sciencesPhylogeneticsparasitic diseasesGenetic variationAnimalsBiologyAlleles030304 developmental biologyEvolutionary Biologylcsh:RBacterial TaxonomyGenetic VariationBacteriologybiochemical phenomena metabolism and nutritionRibosomal RNAbiology.organism_classificationOrganismal EvolutionAphidsMicrobial EvolutionbacteriaMultilocus sequence typinglcsh:QGram-Negative Bacterial InfectionsZoologyEntomologyAgroecologyMultilocus Sequence TypingPLoS ONE
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Local Recruitment in the Greater Flamingo: A New Approach Using Capture- Mark-Recapture Data

1997

International audience; Although the establishment of new individuals in the breeding component of a population is an essential feature of population regulation, only a few attempts have been made to test biological hypotheses about recruitment. Most previous studies rely on ad hoc calculations or are flawed with unwarranted assumptions about survival. We use a recently developed approach, based on capture-mark-recapture, in which analysis of local recruitment is similar to a time-reversed analysis of survival. The basic data set consists of capture histories viewed in reverse order, with initial capture at year of birth, and subsequent observations corresponding to years when the animal ha…

0106 biological sciencescapture-mark-recapture mod- elsPopulation010603 evolutionary biology01 natural sciences010605 ornithologybreeding propensityMark and recapturereproductionage-specific breeding probabilitypopulation dynamicsfirst reproductioneducationEcology Evolution Behavior and SystematicsPhoenicopterus ruber roseuseducation.field_of_studyGreater FlamingobiologyEcologyMortality rateCapture mark recapturebiology.organism_classificationPhoenicopterus ruber roseusCohort[SDE]Environmental SciencesGreater flamingoAkaike information criterionprobability ofseniority probabilitylocal recruitment
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Lake restoration influences nutritional quality of algae and consequently Daphnia biomass

2020

AbstractFood quality is one of the key factors influencing zooplankton population dynamics. Eutrophication drives phytoplankton communities toward the dominance of cyanobacteria, which means a decrease in the availability of sterols and long-chain polyunsaturated fatty acids (EPA and DHA). The effects of different restoration measures on the nutritional quality of the phytoplankton community and subsequent impacts on zooplankton biomass have rarely been considered. We analyzed the nutritional quality of phytoplankton in the eutrophic Lake Vesijärvi in southern Finland over a 37-year period, and studied the impacts of two restoration measures, biomanipulation and hypolimnetic aeration, on th…

0106 biological sciencesfreshwater food websTROPHIC TRANSFERDAPHNIArasvahapotsterols01 natural sciencesDaphniaPHYTOPLANKTONlakespopulation dynamicsravintoaineetLake VesijärviFinlandalgaeeducation.field_of_studyBiomanipulationbiologynutritional ecologybiomass (ecology)EcologyrehevöityminenplanktonvesiekosysteemitlaatuCladoceraravitsemuksellinen ekologiaSterolsPHOSPHORUSqualityEUTROPHICATIONNutritional ecology1181 Ecology evolutionary biologyAmino acidsravintoarvodieteticsrasvahappojailmastuskryptofyytitPopulationvesistöjen kunnostusFRESH-WATER HERBIVOREmakean veden ruokaverkotlevätaminohapotAquatic ScienceCyanobacteriajärvet010603 evolutionary biologyZooplanktonfatty acidssterolejaBIOMANIPULATIONAlgaeFISHFATTY-ACID CONTENTPhytoplanktonCryptophytesDominance (ecology)14. Life underwaterbiomassa (ekologia)Fatty acidseducationsyanobakteeritaerationnutritional valuesterolitamino acidsFreshwater food webs010604 marine biology & hydrobiologyfungirestoration of water systemsmikrolevätbiology.organism_classificationpopulaatiodynamiikkaLONGDaphnia13. Climate actionvesikirputEutrophicationravitsemusravintoverkot
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Spatio-temporal dynamics of density-dependent dispersal during a population colonisation

2019

Predicting population colonisations requires understanding how spatio‐temporal changes in density affect dispersal. Density can inform on fitness prospects, acting as a cue for either habitat quality, or competition over resources. However, when escaping competition, high local density should only increase emigration if lower‐density patches are available elsewhere. Few empirical studies on dispersal have considered the effects of density at the local and landscape scale simultaneously. To explore this, we analyze 5 years of individual‐based data from an experimental introduction of wild guppies Poecilia reticulata. Natal dispersal showed a decrease in local density dependence as density at…

0106 biological sciencesmedia_common.quotation_subjectPoecilia reticulataPopulationPopulation DynamicstranslocationBiology010603 evolutionary biology01 natural sciencesCompetition (biology)populaatiotAnimalseducationrapid evolutionEcology Evolution Behavior and SystematicsEcosystemkinshipComputingMilieux_MISCELLANEOUSmedia_commonPopulation Densityeducation.field_of_studybreeding dispersalmaastamuuttoEcology010604 marine biology & hydrobiologybiology.organism_classificationAttractionpopulaatiodynamiikkaindividual-based dataColonisationPoeciliaDensity dependenceHabitatslope of density dependencesukulaisuus[SDE]Environmental SciencesBiological dispersalta1181landscape scaleAnimal Migrationemigrationmovement[SDE.BE]Environmental Sciences/Biodiversity and Ecologyhammaskarpitleviäminen
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Long live the alien: is high genetic diversity a pivotal aspect of crested porcupine (Hystrix cristata) long-lasting and successful invasion?

2016

AbstractStudying the evolutionary dynamics of an alien species surviving and continuing to expand after several generations can provide fundamental information on the relevant features of clearly successful invasions. Here, we tackle this task by investigating the dynamics of the genetic diversity in invasive crested porcupine (Hystrix cristata) populations, introduced to Italy about 1500 years ago, which are still growing in size, distribution range and ecological niche. Using genome-wide RAD markers, we describe the structure of the genetic diversity and the demographic dynamics of theH. cristatainvasive populations and compare their genetic diversity with that of native African populatio…

0301 basic medicine0106 biological sciences[SDV]Life Sciences [q-bio]01 natural sciencesInvasive speciesgene surfingGene flowinvasive speciesSouth AfricaAfrica Northernpopulation dynamicsNorthern0303 health sciencesbiologyEcologyEcologyPhylogeographyItalyInbreedingGenetic MarkersSettore BIO/05EvolutionPopulationinbreedingAlienRAD sequencing010603 evolutionary biologyHystrix cristatagene surfing; inbreeding; invasive species; population dynamics; RAD sequencing; Africa Northern; Animals; Genetic Markers; Italy; Phylogeography; Porcupines; South Africa; Genetic Variation; Genetics Population; Introduced Species; Ecology Evolution Behavior and Systematics; Genetics03 medical and health sciencesBehavior and Systematicsbiology.animalGeneticsAnimalsEvolutionary dynamicsEcology Evolution Behavior and Systematics030304 developmental biologyEcological nicheGenetic diversityAmbientaleGenetic Variation15. Life on landPorcupinesbiology.organism_classificationPhylogeographyGenetics Population030104 developmental biologyAfricaIntroduced SpeciesPorcupinehuman activities
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The genetic prehistory of the Baltic Sea region

2018

Correction: Nature communications 9 (2018), art. no. 1494 doi:10.1038/s41467-018-03872-y While the series of events that shaped the transition between foraging societies and food producers are well described for Central and Southern Europe, genetic evidence from Northern Europe surrounding the Baltic Sea is still sparse. Here, we report genome-wide DNA data from 38 ancient North Europeans ranging from similar to 9500 to 2200 years before present. Our analysis provides genetic evidence that hunter-gatherers settled Scandinavia via two routes. We reveal that the first Scandinavian farmers derive their ancestry from Anatolia 1000 years earlier than previously demonstrated. The range of Mesolit…

0301 basic medicineBaltic StatesSteppeRange (biology)Population DynamicsDIVERSITYGeneral Physics and Astronomy615 History and ArchaeologyStone Age0302 clinical medicinelcsh:ScienceHistory AncientAncient DNA ; Baltic Sea region ; Stone AgeTransients and MigrantsGENOMES SUGGESTMultidisciplinarygeography.geographical_feature_categoryFossilsCHROMOSOME HAPLOGROUP-NQ1184 Genetics developmental biology physiologyAgriculturehumanitiesADMIXTUREpopulation characteristicsgeographic locationsGene FlowEUROPESciencePastoralismScandinavian and Nordic CountriesEURASIASEQUENCEGeneral Biochemistry Genetics and Molecular BiologyWhite PeoplePrehistory03 medical and health sciencesANCIENT DNAHumans14. Life underwaterAuthor CorrectionMesolithicgeographyGenome HumanGeneral ChemistryBefore PresentArchaeologyHUNTER-GATHERERS030104 developmental biologyAncient DNAlcsh:QEARLY FARMERS030217 neurology & neurosurgeryNature Communications
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Improving risk assessments in conservation ecology

2019

Conservation efforts and management decisions on the living environment of our planet often rely on the results from statistical models. Yet, these models are imperfect and quantification of risk associated with the estimate of management-relevant quantities becomes crucial in providing robust advice. Here we demonstrate that estimates of risk themselves could be substantially biased but by combining data fitting with an extensive simulation–estimation procedure, one can back-calculate the correct values. We apply the method to 627 time series of population abundance across four taxa using the Gompertz state-space model as an example. We find that the risk of large bias in population status…

0301 basic medicineConservation of Natural ResourcesComputer scienceLiving environmentScienceGompertz functionPopulation DynamicsGeneral Physics and Astronomy02 engineering and technologyRisk AssessmentGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesEconometricsAnimalsHumanslcsh:ScienceEcological modellingPopulation DensityMultidisciplinaryModels StatisticalEcologyConservation biologyQStatistical modelGeneral ChemistryVDP::Matematikk og Naturvitenskap: 400Biodiversity021001 nanoscience & nanotechnologyPopulation abundancePopulation variabilityEnvironmental sciences030104 developmental biologyDensity dependencelcsh:QConservation ecology0210 nano-technologyRisk assessmentNature Communications
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Parallel paleogenomic transects reveal complex genetic history of early European farmers

2017

In European Neolithic populations, the arrival of farmers prompted admixture with local hunter-gatherers over many centuries, resulting in distinct signatures in each region due to a complex series of interactions. David Reich and colleagues analyse genome-wide data from 180 individuals from the Neolithic and Chalcolithic periods of Hungary, Germany and Spain to study the population dynamics of Neolithization in European prehistory. They examine how gene flow reshaped European populations during the Neolithic period, including pervasive admixture—the interbreeding between previously isolated populations—between groups with different ancestry profiles. In each region, they find that the arri…

0301 basic medicineGene FlowMale0106 biological sciencesHuman MigrationPopulation DynamicsPopulationDatasets as Topic010603 evolutionary biology01 natural sciencesArticleGene flowPrehistory03 medical and health sciencesSpatio-Temporal AnalysisGermanyGenetic variationHumansDNA AncienteducationTransectHistory Ancient030304 developmental biologyHungary0303 health scienceseducation.field_of_studyGenetic diversityMultidisciplinaryFarmersHuman migrationbusiness.industryEcologyGenetic VariationChalcolithic030104 developmental biologyAncient DNAGeographySpainPeriod (geology)EthnologyFemalebusiness
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Long-term dynamics in microbial eukaryotes communities: a palaeolimnological view based on sedimentary DNA

2016

International audience; Assessing the extent to which changes in lacustrine biodiversity are affected by anthropogenic or climatic forces requires extensive palaeolimnological data. We used high-throughput sequencing to generate time-series data encompassing over 2200 years of microbial eukaryotes (protists and Fungi) diversity changes from the sedimentary DNA record of two lakes (Lake Bourget in French Alps and Lake Igaliku in Greenland). From 176 samples, we sequenced a large diversity of microbial eukaryotes, with a total 16 386 operational taxonomic units distributed within 50 phylogenetic groups. Thus, microbial groups, such as Chlorophyta, Dinophyceae, Haptophyceae and Ciliophora, tha…

0301 basic medicineGeologic SedimentsClimateGreenlandPopulation DynamicsBiodiversityClimate change03 medical and health sciences[ SDU.ENVI ] Sciences of the Universe [physics]/Continental interfaces environmentGeneticsEcosystem14. Life underwaterlake[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentRelative species abundanceEcosystemPhylogenyEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSTrophic levelprotistsbiologyEcologyFungiCommunity structureEukaryotaSedimentBiodiversity15. Life on landbiology.organism_classificationLakes030104 developmental biologyclimate changeeutrophication13. Climate action[SDE]Environmental SciencesFranceeDNAWater MicrobiologyDinophyceae
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The genomic history of Southern Europe

2018

Farming was first introduced to southeastern Europe in the mid-7th millennium BCE - brought by migrants from Anatolia who settled in the region before spreading throughout Europe. However, the dynamics of the interaction between the first farmers and the indigenous hunter-gatherers remain poorly understood because of the near absence of ancient DNA from the region. We report new genome-wide ancient DNA data from 204 individuals-65 Paleolithic and Mesolithic, 93 Neolithic, and 46 Copper, Bronze and Iron Age-who lived in southeastern Europe and surrounding regions between about 12,000 and 500 BCE. We document that the hunter-gatherer populations of southeastern Europe, the Baltic, and the Nor…

0301 basic medicineMaleHistorySteppe01 natural sciencesgenome wide ancient DNA0302 clinical medicinepopulation dynamicsComputingMilieux_MISCELLANEOUSHistory Ancient2. Zero hunger0303 health scienceseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryFarmersGenomeAgricultureCline (biology)GenomicsGrasslandEuropeGeographyWestern europeEthnologyFemalesoutheastern EuropeHumanArchaeogenetics010506 paleontologyAsia[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryHuman MigrationPopulationPopulationSettore BIO/08 - AntropologiaIndigenousArticleAncient03 medical and health sciencesgenetic variation ; genomics ; prehistoric Europe ; prehistoric archeology ; bioarchaeologyBioarchaeologygenomicsGeneticsHumansHUMANISTIC SCIENCES. Archeology.FarmerDNA AncientSex DistributioneducationMesolithic030304 developmental biology0105 earth and related environmental sciencesHUMANISTIČKE ZNANOSTI. Arheologija.Extramuralbusiness.industryGenome HumanAmbientaleDNAArchaeologyPRIRODNE ZNANOSTI. Biologija. Genetika evolucija i filogenija.genome wide ancient DNA; southeastern Europe; population dynamics030104 developmental biologyAncient DNAGenetics PopulationAgriculturegenetic variationAgriculture; Asia; DNA Ancient; Europe; Farmers; Female; Genetics Population; Genome Human; Grassland; History Ancient; Human Migration; Humans; Male; Sex Distribution; GenomicsAncient DNA Genomics Southeastern Europe Genetic VariationbusinessNATURAL SCIENCES. Biology. Genetics Evolution and Phylogenetics.030217 neurology & neurosurgery
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