Search results for "POPULATIONS"

showing 10 items of 493 documents

Diversifying selection on MHC class I in the house sparrow (Passer domesticus).

2009

10 pages; International audience; Genes of the major histocompatibility complex (MHC) are the most polymorphic loci known in vertebrates. Two main hypotheses have been put forward to explain the maintenance of MHC diversity: pathogen-mediated selection and MHC-based mate choice. Host-parasite interactions can maintain MHC diversity via frequency-dependent selection, heterozygote advantage, and diversifying selection (spatially and/or temporally heterogeneous selection). In this study, we wished to investigate the nature of selection acting on the MHC class I across spatially structured populations of house sparrows (Passer domesticus) in France. To infer the nature of the selection, we comp…

0106 biological sciencesMESH : Gene FlowMESH: Selection (Genetics)MESH: GeographyGenes MHC Class IMESH: Genetic MarkersBalancing selectionMESH : Microsatellite Repeats[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencesmicrosatellitesMESH: SparrowsMESH : Genetic MarkersMESH: AnimalsMESH: Genetic VariationMESH: Evolution MolecularGenetics0303 health scienceseducation.field_of_studyGeographybiology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MESH : GeographyMESH: Genes MHC Class I[ SDE.MCG ] Environmental Sciences/Global Changes[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE][SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyMate choiceMESH: Stochastic ProcessesMHC class IMESH : MutationSparrowsGene FlowGenetic MarkersMESH: Mutationbalancing selection[SDE.MCG]Environmental Sciences/Global ChangesPopulationMESH : Genetic DriftMESH: Genetics Populationchemical and pharmacologic phenomenaMESH : Stochastic ProcessesMajor histocompatibility complex010603 evolutionary biologyMESH : Genes MHC Class IEvolution Molecular03 medical and health sciencesMESH : Genetic VariationMHC class IGeneticsPasser domesticusMESH : Selection (Genetics)AnimalsMESH : Evolution MolecularSelection GeneticMESH: Genetic DrifteducationAllelesMESH: Gene FlowEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologyLocal adaptationIsolation by distanceStochastic Processes[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologyhouse sparrowMESH: AllelesGenetic DriftGenetic Variationdiversifying selectionPasser domesticus.[ SDV.GEN.GA ] Life Sciences [q-bio]/Genetics/Animal geneticsMESH : Genetics Population[SDE.ES]Environmental Sciences/Environmental and Society[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsGenetics PopulationEvolutionary biologyMutationbiology.proteinMESH: Microsatellite RepeatsMESH : AnimalsMESH : Sparrows[SDE.BE]Environmental Sciences/Biodiversity and EcologyMESH : Alleles[ SDE.ES ] Environmental Sciences/Environmental and SocietyMicrosatellite Repeats
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The evolution of sperm morphometry in pheasants

2007

7 pages; International audience; Post-copulatory sexual selection is thought to be a potent evolutionary force driving the diversification of sperm shape and function across species. In birds, insemination and fertilization are separated in time and sperm storage increases the duration of sperm-female interaction and hence the opportunity for sperm competition and cryptic female choice. We performed a comparative study of 24 pheasant species (Phasianidae, Galliformes) to establish the relative importance of sperm competition and the duration of sperm storage for the evolution of sperm morphometry (i.e. size of different sperm traits). We found that sperm size traits were negatively associat…

0106 biological sciencesMale[ SDV.BDLR.RS ] Life Sciences [q-bio]/Reproductive Biology/Sexual reproductionsperm storage duration01 natural sciencessperm competitionSperm heteromorphism[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisMESH: AnimalsMESH : FemaleMESH : EvolutionGalliformesMESH : Mating Preference Animalcomparative studypheasantsreproductive and urinary physiology0303 health sciencesLikelihood FunctionsMESH : Galliformes[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MESH: SpermatozoaMESH: GalliformesAnatomyBiological EvolutionSpermatozoaMESH: Mating Preference AnimalFemale sperm storage[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Sexual selectionFemaleMESH : Likelihood Functionsendocrine systemMESH : MaleZoologyBiologyInsemination010603 evolutionary biologyPheasantfemale reproductive biology[SDV.BDLR.RS]Life Sciences [q-bio]/Reproductive Biology/Sexual reproductionsperm morphometry03 medical and health sciencesbiology.animalReproductive biologyMESH: EvolutionMESH : SpermatozoaMESH: Cell ShapeAnimalsSperm competitionCell ShapeEcology Evolution Behavior and Systematics030304 developmental biologyurogenital systemMESH : FertilizationMating Preference AnimalSpermMESH: MaleFertilizationMESH: FertilizationMESH: Likelihood FunctionsMESH : AnimalsMESH : Cell ShapeMESH: Female[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…

2020

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…

0106 biological sciencesMaleincipient sexual isolationQH301 BiologyAcclimatizationADNGenome Insect01 natural sciencesPopulation genomicsAdaptation; Clines; Demography; Population genomics; Selection; SNPs; Structural variants; Acclimatization; Altitude; Animals; DNA Viruses; Drosophila melanogaster; Europe; Genome Mitochondrial; Haplotypes; Insect Viruses; Male; Phylogeography; Polymorphism Single Nucleotide; Genome Insect; Genomic Structural Variation; Microbiota; Selection GeneticSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSeducation.field_of_study0303 health sciencesAltitude[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PE&RCgeneettinen muunteluPhylogeographyDrosophila melanogasterLaboratory of GeneticsTransposable elementnorth-americanmahlakärpäsetSettore BIO/18 - GENETICAselectionLaboratorium voor Erfelijkheidsleeramino-acid polymorphism03 medical and health sciencesGeneticGeneticsAdaptation demographyMicrobiomeAdaptationPolymorphismeducationDrosophilaMolecular BiologySelectionEcology Evolution Behavior and SystematicsDemography[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]DNAchemistryEvolutionary biologyGenome MitochondrialGenomic Structural Variationinversion in(3r)payneAdaptationPopulation genomicsStructural variantsGenètica[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosisadaptation demographyCandidate genenucleotide polymorphismAcademicSubjects/SCI01180chemistry.chemical_compoundMelanogaster2. Zero hungerGenomebiologyMicrobiotaSingle NucleotideClinesclinesMitochondrialEuropepopulaatiogenetiikkatransposable elementsDrosophila melanogasterSNPsnatural-populationspopulation genomicsPopulationnext-generationDrosòfila melanogasterInsect Viruses010603 evolutionary biologyPolymorphism Single NucleotideQH301latitudinal clineGenetic variationAnimalsSelection GeneticSelection (genetic algorithm)DiscoveriesLocal adaptation030304 developmental biologylife-historyAcademicSubjects/SCI01130DNA Virusesstructural variantsDASbiology.organism_classificationHaplotypes13. Climate actionperimä[SDE.BE]Environmental Sciences/Biodiversity and EcologyInsectDNAMolecular Biology and Evolution
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Effectiveness of European Atlanto-Mediterranean MPAs: Do they accomplish the expected effects on populations, communities and ecosystems?

2008

The success of MPAs in conserving fishing resources and protecting marine biodiversity relies strongly on how well they meet their planned (or implicit) management goals. From a review of empirical studies aiming at assessing the ecological effects of Mediterranean and Macaronesian MPAs, we conclude that establishing an MPA is successful for (i) increasing the abundance/biomass, (ii) increasing the proportion of larger/older individuals, and (iii) enhancing the fecundity of commercially harvested populations; also, MPAs demonstrated to be effective for (iv) augmenting local fishery yields through biomass exportation from the protected area, and (v) inducing shifts in fish assemblage structu…

0106 biological sciencesMarine conservationCoastal zone managementSettore BIO/07 - EcologiaMacaronesia.Marine conservation[SDE.MCG]Environmental Sciences/Global ChangesMarine protected areaMediterranean010603 evolutionary biology01 natural sciencesCentro Oceanográfico de BalearesEnvironmental protectionMarine resources conservation -- Mediterranean SeaMacaronesiaMarine protected areasDominance (ecology)EcosystemCoastal ecologyMeta-analysi14. Life underwaterCoastal ecosystem healthMedio MarinoTrophic cascadeComputingMilieux_MISCELLANEOUSNature and Landscape ConservationEcological stabilityEcologyCoastal populations and communities010604 marine biology & hydrobiologyCoastal habitats Meta-analysisMarine reserveCoastal habitatMarine resources conservation -- MacaronesiaMarine reserve15. Life on landCoastal populations and communitieGeography13. Climate actionMarine protected areaProtected areaCoastal habitats
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An integrative approach challenges species hypotheses and provides hints for evolutionary history of two Mediterranean freshwater palaemonid shrimps …

2021

25 pages; International audience; The Mediterranean Region is a biodiversity/endemism hotspot whose freshwater fauna remains largely unexplored. Our integrative study challenges the taxonomic status of two freshwater palaemonid shrimps, Palaemon antennarius and Palaemon minos. Three molecular operational taxonomic units (MOTUs) were defined based on 352 cytochrome oxidase subunit I (COI) sequences and 88 haplotypes. Two belonged to P. antennarius: one inhabiting the Apennine Peninsula and Sicily, and the other from the Balkan Peninsula. Palaemon minos was the third MOTU, found on Crete. The Balkan MOTU of P. antennarius was genetically closer to P. minos than to the other conspecific MOTU. …

0106 biological sciencesMediterranean climateFaunaSpecies hypothesisBiodiversity[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesDNA barcoding03 medical and health sciencesbiology.animalDNA barcode14. Life underwaterdiversity hotspotEndemismgeometric morphometricsintegrative taxonomy030304 developmental biology0303 health sciences[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]biologyEcologyDecapodabiology.organism_classificationCarideaGeographyQL1-991Animal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and EcologyZoology
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Assessing cetacean surveys throughout the Mediterranean Sea: a gap analysis in environmental space

2018

Heterogeneous data collection in the marine environment has led to large gaps in our knowledge of marine species distributions. To fill these gaps, models calibrated on existing data may be used to predict species distributions in unsampled areas, given that available data are sufficiently representative. Our objective was to evaluate the feasibility of mapping cetacean densities across the entire Mediterranean Sea using models calibrated on available survey data and various environmental covariates. We aggregated 302,481 km of line transect survey effort conducted in the Mediterranean Sea within the past 20 years by many organisations. Survey coverage was highly heterogeneous geographicall…

0106 biological sciencesMediterranean climateQH301 Biologylcsh:Medicine010603 evolutionary biology01 natural sciencesMarine speciesArticleFish surveys -- Mediterranean SeaQH301Environmental spaceMediterranean seaFishes -- Mediterranean SeaSDG 14 - Life Below Water14. Life underwaterTransectlcsh:ScienceGEMultidisciplinaryData collection010604 marine biology & hydrobiologylcsh:RDASGap analysis (conservation)[SDE]Environmental SciencesSurvey data collectionEnvironmental sciencelcsh:QPhysical geographyCetacea populations -- Mediterranean SeaGE Environmental Sciences
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From glacial refugia to hydrological microrefugia: Factors and processes driving the persistence of the climate relict tree Zelkova sicula

2021

Abstract With only two tiny populations, the climate relict Zelkova sicula (Sicily, Italy) is one of the rarest trees in the world. It also represents the most marginal member of genus Zelkova that was widespread in the broadleaved forests thriving in warm–temperate climates throughout Eurasia until the Last Glacial Age. Occurring at the westernmost range of the genus under typical Mediterranean climate, the micro‐topographic settings have always appeared crucial for the survival of this relict. However, the factors and processes actually involved in its persistence in the current refugia, as well as the response of similar relict trees in arid environments, are poorly understood worldwide.…

0106 biological sciencesMediterranean climateRange (biology)marginal habitatsrear edge populations010603 evolutionary biology01 natural sciences03 medical and health scienceslcsh:QH540-549.5Glacial periodtopographic attribute analysesecological plasticityEcology Evolution Behavior and SystematicsZelkova siculaOriginal Research030304 developmental biologyNature and Landscape Conservation0303 health sciencesEcologybiologyResistance (ecology)ZelkovaEcologybiology.organism_classificationCenozoic relictsAridGeographyCenozoic relicts ecological plasticity marginal habitats rear edge populations soil moisture topographic attribute analysesSettore BIO/03 - Botanica Ambientale E ApplicataSpatial ecologylcsh:Ecologysoil moisture
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Density, social information, and space use in the common lizard (Lacerta vivipara)

2007

6 pages; International audience; Socially acquired information is widespread in the animal kingdom. Many individuals make behavioral decisions based on such social information. In particular, individuals may decide to leave or select their habitat based on social information. Few studies have investigated the role of density-related information, a potential social cue about habitat quality in dispersal. Here, we tested for the possibility that the phenotype of intruder common lizards (Lacerta vivipara) may inadvertently carry information about their natal population density. We found that such information use is likely. The behavior of focal lizard was influenced by the natal population den…

0106 biological sciencesMetapopulationBiology010603 evolutionary biology01 natural sciencesPopulation density03 medical and health sciencescommon lizardbiology.animal[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosisdispersalpopulation densityEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologyLizard[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]social interactionSocial cueLacerta viviparabiology.organism_classificationSocial relationsocial informationHabitatBiological dispersalAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Levels of genetic differentiation and gene flow between four populations of the Scaly-naped Pigeon, Patagioenas squamosa : implications for conservat…

2021

Island-endemic columbid species are particularly vulnerable to environmental degradation, extreme climatic events, and interactions with exotic species. The situation might be even more critical in the case of exploited species, where legal hunting and poaching can severely affect population dynamics. Here we document for the first time the genetic structure of the Scaly-naped Pigeon, Patagioenas squamosa, a Caribbean-endemic columbid species of cynegetic interest, over a large part of its range. Using both mitochondrial DNA and nuclear markers (microsatellites), we investigated gene flow, genetic diversity, and genetic structure among four islands populations originating from Puerto-Rico, …

0106 biological sciencesMitochondrial DNAColumbiformes[SDV]Life Sciences [q-bio]Scaly-naped pigeonZoologyIntroduced species[SDV.BID]Life Sciences [q-bio]/Biodiversity010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciences14. Life underwaterEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesGenetic diversity[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]biology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]15. Life on landbiology.organism_classificationPatagioenasMicrosatelliteAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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When less means more: evolutionary and developmental hypotheses in rodent molars.

2012

10 pages; International audience; Tooth number in rodents is an example of reduction in evolution. All rodents have a toothless diastema lacking canine and most premolars present in most other mammals. Whereas some rodent lineages retained one premolar (p4), many others lost it during evolution. Recently, an 'inhibitory cascade' developmental model (IC) has been used to predict how the first molar (m1) influences the number and relative sizes of the following distal molars (m2 and m3). The model does not, however, consider the presence of premolars, and here we examine whether the premolar could influence and constrain molar proportions during development and evolution. By investigating a l…

0106 biological sciencesMolarRodentmolar proportionsRodentiapremolarBiologyMacroevolutionModels Biological010603 evolutionary biology01 natural sciencesMandibular first molar03 medical and health sciencesstomatognathic systembiology.animalevolutionPremolarmedicineAnimalsdevelopmentEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology030304 developmental biology0303 health sciencesmacroevolutionDentition[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Anatomyinhibitory cascadeBiological EvolutionMolar[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]medicine.anatomical_structureEvolutionary biologyrodentsDiastemaLinear ModelsBasal phenotype[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology
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