Search results for "PORT"
showing 10 items of 20457 documents
The Chlamydomonas genome reveals the evolution of key animal and plant functions
2007
Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic flagella (cilia), which were inherited from the common ancestor of plants and animals, but lost in land plants. We sequenced the ∼120-megabase nuclear genome of Chlamydomonas and performed comparative phylogenomic analyses, identifying genes encoding uncharacterized proteins that are likely associated with the function and biogenesis of chloroplasts or eukaryotic flagella. Analyses of the Chlamydomonas genome advance our understanding of the a…
A survey of wild plant species for food use in Sicily (Italy) - results of a 3-year study in four Regional Parks
2016
Abstract Background This paper illustrates the results of a study carried out in four Regional Parks of Sicily (Italy), concerning traditional knowledge on food use of wild plant species. The main aims of the paper were: (i) to verify which wild plant species are used for food purpose in the local culture based on information provided by elderly inhabitants (ii) to verify the presence of wild plant species which have not been cited for food use in previous studies in the Mediterranean area (iii) to determine how many of the most frequently cited wild plant species are cultivated by the local population in the four Sicilian Parks. Methods Semi-structured interviews were carried out in the lo…
The efficacy of whole human genome capture on ancient dental calculus and dentin
2019
Objectives Dental calculus is among the richest known sources of ancient DNA in the archaeological record. Although most DNA within calculus is microbial, it has been shown to contain sufficient human DNA for the targeted retrieval of whole mitochondrial genomes. Here, we explore whether calculus is also a viable substrate for whole human genome recovery using targeted enrichment techniques. Materials and methods Total DNA extracted from 24 paired archaeological human dentin and calculus samples was subjected to whole human genome enrichment using in-solution hybridization capture and high-throughput sequencing. Results Total DNA from calculus exceeded that of dentin in all cases, and altho…
The Amphipod assemblages of Sabellaria alveolata reefs from the NW coast of Portugal: an account of the present knowledge, new records, and some biog…
2016
Amphipod assemblages associated with the biogenic reefs built by the honeycomb worm Sabellaria alveolata were studied at two sites (Praia da Aguda and Belinho) along the northwestern coast of Portugal. A total of 3909 specimens were collected, comprising 14 different amphipod species. A first record from the northeastern Atlantic coast was registered here for the species Caprella santosrosai, which was, up to now, recorded only along the Mediterranean coast of the Iberian Peninsula. A male specimen collected from the Sabellaria-reef located in Belinho allowed an update to the known distribution of C. santosrosai, thus altering its previous status as an endemic Mediterranean species. The mos…
At the intersection of cultural and natural heritage: Distribution and conservation of the type localities of Italian endemic vascular plants
2017
Abstract We conducted a GIS spatial analysis with the aim of providing the first quantitative large-scale overview of the distribution patterns of 1536 type localities ( loci classici ) of 1216 Italian endemic vascular plants and their relationship with a set of descriptive variables. Whereas some variables were used to model the presence-absence distribution patterns of the type localities for the whole set of endemics as well as for the subset of narrow endemics, others (e.g., presence inside or outside protected areas and Italian Important Plant Areas) were considered with the purpose of assessing potential assets or risks for conservation. The largest number of type localities was found…
Exploring connectivity between spawning and nursery areas ofMullus barbatus(L., 1758) in the Mediterranean through a dispersal model
2017
Connectivity between spawning and nursery areas plays a major role in determining the spatial structure of fish populations and the boundaries of stock units. Here, the potential effects of surface current on a red mullet population in the Central Mediterranean were simulated using a physical oceanographic model. Red mullet larvae were represented as Lagrangian drifters released in known spawning areas of the Strait of Sicily (SoS), which represents one of the most productive demersal fishing-grounds of the Mediterranean. To consider the effect of inter-annual variability of oceanographic patterns, numerical simulations were performed for the spawning seasons from 1999 to 2012. The main goa…
Phytoplankton assemblages in a complex system of interconnected reservoirs: the role of water transport in dispersal
2017
Phytoplankton in a complex network of reservoirs for drinking water supply was sampled in the dry and flood seasons to understand the role of dispersal through hydrochory and of environmental filters in determining the phytoplankton abundance and composition. The main assumptions tested in the present study are that (i) phytoplankton structure in these waterbodies is strongly dependent on the transportation with the river waters flowing through them and (ii) the importance of this stochastic transportation is decreasing as the connectivity with the river decreases allowing environmental filters to shape phytoplankton structure. The multivariate analysis showed that although phytoplankton wa…
When less means more: evolutionary and developmental hypotheses in rodent molars.
2012
10 pages; International audience; Tooth number in rodents is an example of reduction in evolution. All rodents have a toothless diastema lacking canine and most premolars present in most other mammals. Whereas some rodent lineages retained one premolar (p4), many others lost it during evolution. Recently, an 'inhibitory cascade' developmental model (IC) has been used to predict how the first molar (m1) influences the number and relative sizes of the following distal molars (m2 and m3). The model does not, however, consider the presence of premolars, and here we examine whether the premolar could influence and constrain molar proportions during development and evolution. By investigating a l…
A minimalist macroparasite diversity in the round goby of the Upper Rhine reduced to an exotic acanthocephalan lineage.
2018
AbstractThe round goby, Neogobius melanostomus, is a Ponto-Caspian fish considered as an invasive species in a wide range of aquatic ecosystems. To understand the role that parasites may play in its successful invasion across Western Europe, we investigated the parasitic diversity of the round goby along its invasion corridor, from the Danube to the Upper Rhine rivers, using data from literature and a molecular barcoding approach, respectively. Among 1666 parasites extracted from 179 gobies of the Upper Rhine, all of the 248 parasites barcoded on the c oxidase subunit I gene were identified as Pomphorhynchus laevis. This lack of macroparasite diversity was interpreted as a loss of parasites…
A new flatworm species of Temnocephala (Rhabdocoela, Temnocephalidae) ectosymbiont on the freshwater crab Valdivia serrata (Decapoda, Trichodactylida…
2020
A new species of temnocephalan is described from the branchial chambers ofValdivia serratain Colombia asTemnocephala ivandarioisp. nov.The most distinctive characters of the new species are in the cirrus and the epidermal ‘excretory’ syncytial plates. In the present study, the terminology to describe the cirrus of species ofTemnocephalais updated. Comparison between the shape of the cirrus of the temnocephalans associated with trichodactylid crabs is also provided.