Search results for "PROTEIN"

showing 10 items of 21431 documents

Mitochondrial heteroplasmy in an avian hybrid form (Passer italiae: Aves, Passeriformes)

2019

Mitochondrial heteroplasmy is the result from biparental transmission of mitochondrial DNA (mtDNA) to the offspring. In such rare cases, maternal and paternal mtDNA is present in the same individual. Though recent studies suggested that mtDNA heteroplasmy might be more common than previously anticipated, that phenomenon is still poorly documented and was mostly detected in case studies on hybrid populations. The Italian sparrow, Passer italiae is a homoploid hybrid form that occurs all across the Italian Peninsula mostly under strict absence of either of its parent species, the house sparrow (P. domesticus) and the Spanish sparrow (P. hispaniolensis). In this study, we document a new case o…

0106 biological sciences0301 basic medicineMitochondrial DNASettore BIO/05 - ZoologiaMediterranean010603 evolutionary biology01 natural sciences03 medical and health sciencesbiology.animalGeneticsItalian sparrowMolecular BiologyhybridizationSpanish sparrowSparrowbiologysparrowsHaplotypeNADH dehydrogenasebiology.organism_classificationHeteroplasmy030104 developmental biologyEvolutionary biologyPaternal leakagebiology.proteinPasser
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Phosphinotripeptidic Inhibitors of Leucylaminopeptidases

2021

Phosphinate pseudopeptide are analogs of peptides containing phosphinate moiety in a place of the amide bond. Due to this, the organophosphorus fragment resembles the tetrahedral transition state of the amide bond hydrolysis. Additionally, it is also capable of coordinating metal ions, for example, zinc or magnesium ions. These two properties of phosphinate pseudopeptides make them an ideal candidate for metal-related protease inhibitors. This research investigates the influence of additional residue in the P2 position on the inhibitory properties of phosphinopeptides. The synthetic strategy is proposed, based on retrosynthetic analysis. The N-C-P bond formation in the desired compounds is …

0106 biological sciences0301 basic medicineModels MolecularMolecular modelQH301-705.5StereochemistryPhosphinesProtein ConformationSwineLAP inhibitorsligand-enzyme interactionPhosphinate01 natural sciencesAminopeptidaseCatalysisArticleInorganic Chemistry03 medical and health sciencesResidue (chemistry)phosphinate pseudopeptideLeucyl AminopeptidaseMoietyPeptide bondAnimalsBiology (General)Physical and Theoretical ChemistryEnzyme InhibitorsQD1-999Molecular BiologyMagnesium ionmolecular modeling; LAP inhibitors; barley aminopeptidase inhibitor; phosphinate pseudopeptide; ligand-enzyme interaction; organophosphorus compoundSpectroscopyChemistrymolecular modelingOrganic ChemistryGeneral Medicineorganophosphorus compoundPeptide FragmentsComputer Science ApplicationsChemistry030104 developmental biologybarley aminopeptidase inhibitorHordeum vulgare010606 plant biology & botanyInternational Journal of Molecular Sciences; Volume 22; Issue 10; Pages: 5090
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The Odorant-Binding Proteins of the Spider Mite Tetranychus urticae

2021

Spider mites are one of the major agricultural pests, feeding on a large variety of plants. As a contribution to understanding chemical communication in these arthropods, we have characterized a recently discovered class of odorant-binding proteins (OBPs) in Tetranychus urticae. As in other species of Chelicerata, the four OBPs of T. urticae contain six conserved cysteines paired in a pattern (C1–C6, C2–C3, C4–C5) differing from that of insect counterparts (C1–C3, C2–C5, C4–C6). Proteomic analysis uncovered a second family of OBPs, including twelve members that are likely to be unique to T. urticae. A three-dimensional model of TurtOBP1, built on the recent X-ray structure of Varroa destruc…

0106 biological sciences0301 basic medicineModels MolecularProteomicsProteomeOdorant bindingProtein ConformationInsectLigandsReceptors Odorant01 natural scienceschemistry.chemical_compoundTetranychus urticaeBiology (General)SpectroscopyPhylogenymedia_commonmass spectrometryGeneticsbiologyligand-bindingMolecular Structurespider mitesGeneral MedicineTetranychus urticaeComputer Science ApplicationsChemistryConiferyl aldehydedisulfide bridgesTetranychidaeProtein Bindingspider mites.QH301-705.5media_common.quotation_subjectodorant-binding proteinsCatalysisArticleInorganic Chemistry03 medical and health sciencesSpider mite<i>Tetranychus urticae</i>AnimalsAmino Acid SequencePhysical and Theoretical ChemistryQD1-999Molecular BiologySpiderOrganic Chemistrybiology.organism_classification010602 entomology030104 developmental biologychemistryVarroa destructorOdorantsChelicerataInternational Journal of Molecular Sciences
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Bacillus thuringiensis Vip3Aa Toxin Resistance in Heliothis virescens (Lepidoptera: Noctuidae)

2017

ABSTRACT Laboratory selection with Vip3Aa of a field-derived population of Heliothis virescens produced &gt;2,040-fold resistance in 12 generations of selection. The Vip3Aa-selected (Vip-Sel)-resistant population showed little cross-resistance to Cry1Ab and no cross-resistance to Cry1Ac. Resistance was unstable after 15 generations without exposure to the toxin. F 1 reciprocal crosses between Vip3Aa-unselected (Vip-Unsel) and Vip-Sel insects indicated a strong paternal influence on the inheritance of resistance. Resistance ranged from almost completely recessive (mean degree of dominance [ h ] = 0.04 if the resistant parent was female) to incompletely dominant (mean h = 0.53 if the resistan…

0106 biological sciences0301 basic medicineMultifactorial Inheritancemedia_common.quotation_subjectPopulationInsectBiology01 natural sciencesApplied Microbiology and BiotechnologyInsecticide ResistanceLepidoptera genitaliaHemolysin Proteins03 medical and health sciencesBacterial ProteinsBacillus thuringiensisInvertebrate MicrobiologyAnimalsSelection GeneticeducationCrosses Geneticmedia_commonGeneticseducation.field_of_studyBacillus thuringiensis ToxinsEcologyHeliothis virescensfungibiology.organism_classificationSurvival AnalysisEndotoxinsLepidoptera010602 entomology030104 developmental biologyCry1AcPaternal InheritanceNoctuidaeBiological AssayPEST analysisFood ScienceBiotechnologyApplied and Environmental Microbiology
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Overexpression of the triose phosphate translocator (TPT) complements the abnormal metabolism and development of plastidial glycolytic glyceraldehyde…

2017

The presence of two glycolytic pathways working in parallel in plastids and cytosol has complicated the understanding of this essential process in plant cells, especially the integration of the plastidial pathway into the metabolism of heterotrophic and autotrophic organs. It is assumed that this integration is achieved by transport systems, which exchange glycolytic intermediates across plastidial membranes. However, it is unknown whether plastidial and cytosolic pools of 3-phosphoglycerate (3-PGA) can equilibrate in non-photosynthetic tissues. To resolve this question, we employed Arabidopsis mutants of the plastidial glycolytic isoforms of glyceraldehyde-3-phosphate dehydrogenase (GAPCp)…

0106 biological sciences0301 basic medicineMutantArabidopsisDehydrogenasePlant ScienceGlyceric Acids01 natural sciences03 medical and health sciencesGeneticsGlycolysisPlastidsPlastidGlyceraldehyde 3-phosphate dehydrogenasebiologyArabidopsis ProteinsGlyceraldehyde-3-Phosphate DehydrogenasesCell BiologyMetabolismCytosol030104 developmental biologyBiochemistryTriose phosphate translocatorbiology.proteinGlycolysis010606 plant biology & botanyThe Plant journal : for cell and molecular biology
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An Arabidopsis Mutant Over-Expressing Subtilase SBT4.13 Uncovers the Role of Oxidative Stress in the Inhibition of Growth by Intracellular Acidificat…

2020

Intracellular acid stress inhibits plant growth by unknown mechanisms and it occurs in acidic soils and as consequence of other stresses. In order to identify mechanisms of acid toxicity, we screened activation-tagging lines of Arabidopsis thaliana for tolerance to intracellular acidification induced by organic acids. A dominant mutant, sbt4.13-1D, was isolated twice and shown to over-express subtilase SBT4.13, a protease secreted into endoplasmic reticulum. Activity measurements and immuno-detection indicate that the mutant contains less plasma membrane H+-ATPase (PMA) than wild type, explaining the small size, electrical depolarization and decreased cytosolic pH of the mutant but not orga…

0106 biological sciences0301 basic medicineMutantmedicine.disease_cause01 natural sciencesCatalysisInorganic Chemistrylcsh:ChemistryH<sup>+</sup>-ATPase03 medical and health sciencesorganic acidsmedicinePhysical and Theoretical ChemistryMolecular Biologylcsh:QH301-705.5Spectroscopychemistry.chemical_classificationReactive oxygen speciesNADPH oxidasebiologyNADPH oxidaseEndoplasmic reticulumOrganic ChemistryWild typeROSGeneral MedicineComputer Science ApplicationsCell biology030104 developmental biologychemistrylcsh:Biology (General)lcsh:QD1-999biology.proteinactivation-taggingIntracellularOxidative stress010606 plant biology & botanyOrganic acidInternational Journal of Molecular Sciences
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Evolutionary diversification of type-2 HDAC structure, function and regulation in Nicotiana tabacum

2018

Ministère de l'Education Nationale et de la Recherche ; Conseil Régional de Bourgogne (PARI AGRALE8) ; Association pour la Recherche sur les Nicotianacées ; Conseil Régional de Bourgogne; International audience; Type-2 HDACs (HD2s) are plant-specific histone deacetylases that play diverse roles during development and in responses to biotic and abiotic stresses. In this study we characterized the six tobacco genes encoding HD2s that mainly differ by the presence or the absence of a typical zinc finger in their C-terminal part. Of particular interest, these HD2 genes exhibit a highly conserved intron/exon structure. We then further investigated the phylogenetic relationships among the HD2 gen…

0106 biological sciences0301 basic medicineNicotiana tabacumPlant Science01 natural sciencesEvolution MolecularType-2 HDAC (HD2)03 medical and health sciencesPhylogeneticsZinc fingerTobaccoGeneticsArabidopsis thalianaGene family[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAmino Acid SequenceGenePhylogenySolanaceaePlant ProteinsZinc fingerGeneticsbiologyModels GeneticIntronZinc FingersGeneral MedicineSalt Tolerancebiology.organism_classificationSalt stress responseComplementation030104 developmental biologyHistone DeACetylase (HDAC)Agronomy and Crop ScienceSequence Alignment010606 plant biology & botany
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The specific role of plastidial glycolysis in photosynthetic and heterotrophic cells under scrutiny through the study of glyceraldehyde-3-phosphate d…

2016

The cellular compartmentalization of metabolic processes is an important feature in plants where the same pathways could be simultaneously active in different compartments. Plant glycolysis occurs in the cytosol and plastids of green and non-green cells in which the requirements of energy and precursors may be completely different. Because of this, the relevance of plastidial glycolysis could be very different depending on the cell type. In the associated study, we investigated the function of plastidial glycolysis in photosynthetic and heterotrophic cells by specifically driving the expression of plastidial glyceraldehyde-3-phosphate dehydrogenase (GAPCp) in a glyceraldehyde-3-phosphate de…

0106 biological sciences0301 basic medicineNitrogenArabidopsisDehydrogenasePlant Science01 natural sciencesPlant RootsSerine03 medical and health scienceschemistry.chemical_compoundBiosynthesisSerineGlycolysisPlastidsPlastidPhosphorylationPhotosynthesisGlyceraldehyde 3-phosphate dehydrogenasebiologyGlyceraldehyde-3-Phosphate DehydrogenasesCompartmentalization (fire protection)CarbonArticle AddendumCytosol030104 developmental biologychemistryBiochemistryMutationbiology.proteinGlycolysis010606 plant biology & botany
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The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism

2021

Abstract Because it is the precursor for various essential cellular components, the amino acid serine is indispensable for every living organism. In plants, serine is synthesized by two major pathways: photorespiration and the phosphorylated pathway of serine biosynthesis (PPSB). However, the importance of these pathways in providing serine for plant development is not fully understood. In this study, we examine the relative contributions of photorespiration and PPSB to providing serine for growth and metabolism in the C3 model plant Arabidopsis thaliana. Our analyses of cell proliferation and elongation reveal that PPSB-derived serine is indispensable for plant growth and its loss cannot b…

0106 biological sciences0301 basic medicineNitrogenPhysiologyNitrogen assimilationCell RespirationArabidopsisPlant DevelopmentPlant Science01 natural sciencesSerine03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsBiosynthesisGlutamine synthetaseSerineGeneticsPhosphorylationResearch ArticlesCell Proliferationchemistry.chemical_classificationbiologyChemistryMetabolismBiosynthetic PathwaysAmino acid030104 developmental biologyBiochemistrybiology.proteinPhotorespirationGlutamine oxoglutarate aminotransferase010606 plant biology & botanyPlant Physiology
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Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?

2016

Background Naturally growing populations of olive trees are found in the Mediterranean garrigue and maquis in Israel. Here, we used the Simple Sequence Repeat (SSR) genetic marker technique to investigate whether these represent wild var. sylvestris. Leaf samples were collected from a total of 205 trees at six sites of naturally growing olive populations in Israel. The genetic analysis included a multi-locus lineage (MLL) analysis, Rousset’s genetic distances, Fst values, private alleles, other diversity values and a Structure analysis. The analyses also included scions and suckers of old cultivated olive trees, for which the dominance of one clone in scions (MLL1) and a second in suckers (…

0106 biological sciences0301 basic medicineOleasterPopulationPlant ScienceBiology010603 evolutionary biology01 natural sciencesTreesGene flow03 medical and health sciencesHistorical agricultureOleaBotanyGenetic variationIsraeleducationAllelesPhylogenyPlant ProteinsGenetic diversityeducation.field_of_studyGraftingCultivated old olive treesvar. sylvestrisGenetic VariationGene flowSexual reproductionOlive trees030104 developmental biologyGenetic markerCrop domesticationGenetic structureResearch ArticleMicrosatellite RepeatsBMC Plant Biology
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