Search results for "Pairing"

showing 10 items of 173 documents

Seasonal cycle of benthic denitrification and DNRA in the aphotic coastal zone, northern Baltic Sea

2020

Current knowledge on the seasonality of benthic nitrate reduction pathways in the aphotic, density stratified coastal zone of the Baltic Sea is largely based on data from muddy sediments, neglecting the potential contribution of sandy sediments. To gain a more comprehensive understanding of seasonality in this part of the Baltic Sea coast, we measured rates of benthic denitrification, anammox and dissimilatory nitrate reduction to ammonium (DNRA) monthly in the ice-free period of 2016 in both sandy and muddy aphotic sediments, northwestern Gulf of Finland. No anammox was observed. The seasonal cycle of denitrification in both sediment types was related to the hydrography-driven development …

0106 biological sciencesDenitrification010504 meteorology & atmospheric sciencesMARINE-SEDIMENTSFIXED-NITROGENsedimentitANAMMOX01 natural scienceswater column density stratificationCoastal zoneorganic matterNUTRIENT FLUXESEcologykausivaihtelutnitraatitWater column density stratificationOceanographyBenthic zoneOrganic matterorgaaninen ainesSeasonal cycledenitrifikaatioSandy sedimentrannikkoalueetDISSIMILATORY NITRATE REDUCTIONNutrient fluxAquatic ScienceNITRIFICATIONNitrate reduction14. Life underwaterCoastal filter1172 Environmental sciencesEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesbenthic−pelagic coupling010604 marine biology & hydrobiologyGeomorphologyISOTOPE PAIRING TECHNIQUENorthern Gulf of FinlandBenthic-pelagic couplingAMMONIUMgeomorphologysandy sedimentESTUARINE SEDIMENTNITROGEN REMOVALnitrate reductionBaltic sea13. Climate actionAphotic zonecoastal filteraineiden kiertoEnvironmental scienceNitrificationMarine Ecology Progress Series
researchProduct

Assortative pairing for boldness and consequences for reproductive success in Montagu’s harrier

2021

Abstract Behavioural combination within pairs depending on personality and plasticity might influence reproductive success. However, studies testing this hypothesis are rare, especially in the case of monogamous species with bi-parental care in which the sexes exhibit different behavioural roles. In this study, we investigated the pairing patterns for both boldness and boldness plasticity in Montagu’s harriers (Circus pygargus), a species with sex-specific care, and the consequences for their reproductive success. We measured individual boldness and plasticity for both sexes, and we assessed the pairing pattern in the Montagu’s harrier population for these two traits. We calculated four ind…

0106 biological sciencesbehavioural similarityReproductive successbehavioural reaction normsBoldnessmedia_common.quotation_subject05 social sciencesZoologyBiology010603 evolutionary biology01 natural sciencesflight initiation distancepersonalityPairingplasticity[SDE]Environmental Sciencessexual selection0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyMontagu's harrierEcology Evolution Behavior and Systematicsmedia_common
researchProduct

Size-assortative pairing in Gammarus pulex (Crustacea: Amphipoda): a test of the prudent choice hypothesis.

2010

6 pages; International audience; Positive assortative mating is a widespread phenomenon in the animal kingdom. Several hypotheses have been proposed to explain this reproductive pattern in natural populations, but growing evidence suggests that assortative mating most often results from sexual mating preferences. Recently, conditiondependent mate choice in the face of costly competition for mates has been proposed to explain assortative mating in natural populations. Variation in competitive ability may generate variation in both the strength and the direction of mate preference, resulting in assortative mating with respect to individual quality if low-quality competitors are less choosy, o…

0106 biological sciencesmedia_common.quotation_subjectPopulationZoology010603 evolutionary biology01 natural sciencesCompetition (biology)Gammarus pulex[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosisprudent choicesexual selection0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyMatingeducationassortative pairingEcology Evolution Behavior and Systematicsmedia_commoneducation.field_of_study[ SDE.BE ] Environmental Sciences/Biodiversity and EcologybiologyEcology05 social sciencesAssortative matingbiology.organism_classificationMating preferencesGammarus pulexMate choiceSexual selectionAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
researchProduct

Influence of female moulting status on pairing decisions and size‐assortative mating in amphipods

2012

8 pages; International audience; Precopulatory mate guarding is a common strategy, which has evolved in species where the female receptivity (and thus egg fertilization) is predictable, but also limited to a short period. Although males are larger than females in many amphipods, the largest males pair with the largest females, leading to a positive sizeassortative pairing. Size-assortative pairing has received much attention but how moulting physiology could affect pairing decisions has rarely been studied. Here, we tested the hypothesis that the size-assortative pairing in the freshwater amphipod Gammarus pulex is closely related to the female moult cycle. We characterized moulting status …

0106 biological sciencesprecopulatory guardingsize-assortative pairingZoologyBiology010603 evolutionary biology01 natural sciencesmoultGammarus pulex[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisCuticle formationmate choiceEcology Evolution Behavior and Systematics[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMate guardingcrustaceansEcology010604 marine biology & hydrobiologyAssortative matingbiology.organism_classificationCrustaceanGammarus pulexMate choicePairingAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and EcologyMoulting[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisJournal of Zoology
researchProduct

New insights into the mechanism of action of pyrazolo[1,2-a]benzo[1,2,3,4]tetrazin-3-one derivatives endowed with anticancer potential

2018

Due to the scarce biological profile, the pyrazolo[1,2-a]benzo[1,2,3,4]tetrazine-3-one scaffold (PBT) has been recently explored as promising core for potential anticancer candidates. Several suitably decorated derivatives (PBTs) exhibited antiproliferative activity in the low-micromolar range associated with apoptosis induction and cell cycle arrest on S phase. Herein, we selected the most active derivatives and submitted them to further biological explorations to deepen the mechanism of action. At first, a DNA targeting is approached by means of flow Linear Dichroism experiments so as to evaluate how small planar molecules might interact with DNA, including the interference with the catal…

0301 basic medicineCell cycle checkpointPyrazolo[1TetrazolesBiochemistrychemistry.chemical_compound0302 clinical medicineSalmonAntiproliferative; DNA-interacting; Intercalation; Linear dichroism; Molecular docking; Pyrazolo[12-a]benzo[1234]tetrazin-3-one; Topoisomerase II; Biochemistry; Molecular MedicineDrug DiscoveryDNA-interactingBase PairingADMEbiologyIntercalating AgentsMolecular Docking Simulation030220 oncology & carcinogenesisMolecular Medicinemedicine.symptomtopoisomerase II3StereochemistryIn silico2Antineoplastic Agentslinear dichroism03 medical and health sciencesantiproliferativeintercalationmedicineAnimalsHumansDNA Cleavage2-a]benzo[1Pharmacology4]tetrazin-3-oneBinding SitesTopoisomeraseOrganic ChemistryDNAmolecular dockingSettore CHIM/08 - Chimica FarmaceuticaChemical spaceProtein Structure TertiaryDNA Topoisomerases Type II030104 developmental biologyMechanism of actionchemistryCatalytic cyclebiology.proteinpyrazolo[12-a]benzo[1234]tetrazin-3-oneDNAChemical Biology & Drug Design
researchProduct

Singlet Oxygen Attack on Guanine: Reactivity and Structural Signature within the B-DNA Helix

2016

International audience; Oxidatively generated DNA lesions are numerous and versatile, and have been the subject of intensive research since the discovery of 8-oxoguanine in 1984. Even for this prototypical lesion, the precise mechanism of formation remains elusive due to the inherent difficulties in characterizing high-energy intermediates. We have probed the stability of the guanine endoperoxide in B-DNA as a key intermediate and determined a unique activation free energy of around 6 kcal mol−1 for the formation of the first C−O covalent bond upon the attack of singlet molecular oxygen (1O2) on the central guanine of a solvated 13 base-pair poly(dG-dC), described by means of quantum mechan…

0301 basic medicineGuanineBase pairGuanineMolecular Dynamics Simulation010402 general chemistryPhotochemistry01 natural sciencesCatalysis03 medical and health sciencesMolecular dynamicschemistry.chemical_compoundPolydeoxyribonucleotidesReactivity (chemistry)Base PairingSinglet OxygenChemistrySinglet oxygenOrganic ChemistrySolvationGeneral Chemistry0104 chemical sciences030104 developmental biologyCovalent bondHelixDNA B-FormOxidation-Reduction[CHIM.RADIO]Chemical Sciences/Radiochemistry
researchProduct

Maternal Inheritance of a Recessive RBP4 Defect in Canine Congenital Eye Disease

2018

SUMMARY Maternally skewed transmission of traits has been associated with genomic imprinting and oocyte-derived mRNA. We report canine congenital eye malformations, caused by an amino acid deletion (K12del) near the N terminus of retinol-binding protein (RBP4). The disease is only expressed when both dam and offspring are deletion homozygotes. RBP carries vitamin A (retinol) from hepatic stores to peripheral tissues, including the placenta and developing eye, where it is required to synthesize retinoic acid. Gestational vitamin A deficiency is a known risk factor for ocular birth defects. The K12del mutation disrupts RBP folding in vivo, decreasing its secretion from hepatocytes to serum. T…

0301 basic medicineMaleNon-Mendelian inheritanceProtein Foldingcongenital eye defectEye Diseasesgenetic structuresNATIVE DISULFIDE BONDSMedical PhysiologyRetinoic acidReproductive health and childbirth413 Veterinary scienceMicrophthalmiavitamin Achemistry.chemical_compoundPlasmaA-vitamiini2.1 Biological and endogenous factorsMicrophthalmosPrealbuminCRYSTAL-STRUCTUREAetiologyBase Pairinglcsh:QH301-705.5Sequence DeletionPediatricwhole genome sequencingVITAMIN-A-DEFICIENCYANOPHTHALMIAPenetrancePedigreemedicine.anatomical_structurePhenotypeFemalemedicine.medical_specialtyGenotypeENDOPLASMIC-RETICULUMGenes RecessiveMETABOLISMBiologyGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesDogscanine geneticsInternal medicinePlacentaRETINOL-BINDING-PROTEINGeneticsmedicineAnimalsHumansRecessiveMALFORMATIONSBIOCHEMICAL BASISAmino Acid SequenceAlleleEye Disease and Disorders of VisionNutritiongenome-wide association study030102 biochemistry & molecular biologywestern blottingMUTATIONSta1184RBP4maternal inheritancemedicine.diseaseRetinol-Binding ProteinsRetinol binding proteinnuclear magnetic resonance030104 developmental biologyEndocrinologychemistryGeneslcsh:Biology (General)microphthalmiaGenetic LociHela Cells1182 Biochemistry cell and molecular biologyCongenital Structural Anomalies3111 BiomedicineBiochemistry and Cell BiologyDigestive DiseasesGenomic imprintingRetinol-Binding Proteins PlasmaHeLa Cells
researchProduct

Manganese Ions Individually Alter the Reverse Transcription Signature of Modified Ribonucleosides

2020

Reverse transcription of RNA templates containing modified ribonucleosides transfers modification-related information as misincorporations, arrest or nucleotide skipping events to the newly synthesized cDNA strand. The frequency and proportion of these events, merged from all sequenced cDNAs, yield a so-called RT signature, characteristic for the respective RNA modification and reverse transcriptase (RT). While known for DNA polymerases in so-called error-prone PCR, testing of four different RTs by replacing Mg2+ with Mn2+ in reaction buffer revealed the immense influence of manganese chloride on derived RT signatures, with arrest rates on m1A positions dropping from 82% down to 24%. Additi…

0301 basic medicinelcsh:QH426-470DNA polymerasechemistry.chemical_elementManganeseSaccharomyces cerevisiaeRT signature[SDV.BBM.BM] Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology01 natural sciencesArticle03 medical and health sciencesm1ARNA modificationsComplementary DNA[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]GeneticsNucleotidem<sup>1</sup>ABase PairingGenetics (clinical)PolymeraseComputingMilieux_MISCELLANEOUSchemistry.chemical_classificationIonsManganesebiology010405 organic chemistryRNARNA-Directed DNA Polymerase[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyreverse transcriptionMolecular biologyReverse transcriptase0104 chemical scienceslcsh:Genetics030104 developmental biologyTemplatechemistrybiology.proteinRNA[SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Ribonucleosidesmanganese chloride
researchProduct

Can copper(II) mediate Hoogsteen base-pairing in a left-handed DNA duplex? A pulse EPR study

2010

Pulse EPR spectroscopy is sued to investigate possible structural features of the copper(II) ion coordinated to poly(dG-dC) poly(dG-dC) in a frozen aqueous solution, and the structural change of the polynucleotide induced by the presence of the metal ion. Two different copper species were identified and their geometry explained by a molecular model. According to this model, one species is exclusively coordinated to a single guanine with the N7 nitrogen atom forming a coordinative bond with the copper. In the other species, a guanine and a cytosine form a ternary complex together with the copper ion. A copper crosslink between the N7 of guanine and N3 of cytosine is proposed as the most prob…

10120 Department of ChemistryCircular dichroismGuanineStereochemistryHoogsteen base pairrame strutture del DNA basi nucleotidiche EPR a impulsi risonanza paramagneticachemistry.chemical_elementTriple-stranded DNA3107 Atomic and Molecular Physics and OpticsNucleobasechemistry.chemical_compoundPolydeoxyribonucleotidesDNA structures540 ChemistryDNA Z-FormPhysical and Theoretical ChemistryBase PairingTernary complexCircular Dichroismstructure elucidationElectron Spin Resonance Spectroscopypulse EPIR spectroscopynucleobasesCopperSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Atomic and Molecular Physics and Opticschemistrycopper1606 Physical and Theoretical ChemistryCytosine
researchProduct

Brain responses of dysphoric and control participants during a self-esteem implicit association test.

2021

Previous studies have reported lowered implicit self-esteem at the behavioral level among depressed individuals. However, brain responses related to the lowered implicit self-esteem have not been investigated in people with depression. Here, event-related potentials were measured in 28 dysphoric participants (individuals with elevated amounts of depressive symptoms) and 30 control participants during performance of an implicit association task (IAT) suggested to reflect implicit self-esteem. Despite equivalent behavioral performance, differences in brain responses were observed between the dysphoric and the control groups in late positive component (LPC) within 400-1,000 ms poststimulus lat…

AdultMalemedicine.medical_specialtyAdolescentCognitive Neurosciencemedia_common.quotation_subjectExperimental and Cognitive PsychologyAudiologyDysphoria050105 experimental psychology03 medical and health sciencesYoung Adult0302 clinical medicineDevelopmental NeurosciencemedicineHumans0501 psychology and cognitive sciencesImplicit self-esteemAssociation (psychology)Late positive componentEvoked PotentialsBiological Psychiatrymedia_commonDepressive DisorderEndocrine and Autonomic SystemsDepressionGeneral Neuroscience05 social sciencesSelf-esteemImplicit-association testElectroencephalographySelf ConceptNeuropsychology and Physiological PsychologyNeurologyCategorizationPairingFemalemedicine.symptomPsychologypsychological phenomena and processes030217 neurology & neurosurgeryBiomarkersPsychophysiologyREFERENCES
researchProduct