Search results for "Photochemical"

showing 10 items of 108 documents

Synthesis of a potent photoreactive acidic γ-secretase modulator for target identification in cells.

2012

Supramolecular self-assembly of amyloidogenic peptides is closely associated with numerous pathological conditions. For instance, Alzheimer´s disease (AD) is characterized by abundant amyloid plaques originating from the proteolytic cleavage of the amyloid precursor protein (APP) by β- and γ-secretases. Compounds named γ-secretase modulators (GSMs) can shift the substrate cleavage specificity of γ-secretase toward the production of non-amyloidogenic, shorter Aβ fragments. Herein, we describe the synthesis of highly potent acidic GSMs, equipped with a photoreactive diazirine moiety for photoaffinity labeling. The probes labeled the N-terminal fragment of presenilin (the catalytic subunit of …

Models MolecularStereochemistryProtein subunitClinical BiochemistrySupramolecular chemistryPharmaceutical ScienceCHO CellsCleavage (embryo)BiochemistryPresenilinStructure-Activity Relationshipchemistry.chemical_compoundCricetinaeDrug DiscoveryAmyloid precursor proteinAnimalsMoietyMolecular BiologyDose-Response Relationship DrugMolecular StructurePhotoaffinity labelingbiologyAzirinesChemistryOrganic ChemistryPhotochemical ProcessesBiochemistryDiazirinebiology.proteinMolecular MedicineAmyloid Precursor Protein Secretases
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Chemistry and Photochemistry of 2,6-Bis(2-hydroxybenzilidene)cyclohexanone. An Example of a Compound Following the Anthocyanins Network of Chemical R…

2014

The kinetics and thermodynamics of the 2,6-bis(2-hydroxybenzilidene)cyclohexanone chemical reactions network was studied at different pH values using NMR, UV-vis, continuous irradiation, and flash photolysis. The chemical behavior of the system partially resembles anthocyanins and their analogue compounds. 2,6-Bis(2-hydroxybenzilidene)cyclohexanone exhibits a slow color change from yellow to red styrylflavylium under extreme acidic conditions. The rate constant for this process (5 × 10(-5) s(-1)) is pH independent and controlled by the cis-trans isomerization barrier. However, the interesting feature is the appearance of the colorless compound, 7,8-dihydro-6H-chromeno[3,2-d]xanthene, isolat…

Models MolecularXantheneMolecular StructureCyclohexanonesKineticsCyclohexanoneHydrogen-Ion ConcentrationPhotochemical ProcessesPhotochemistryChemical reactionAnthocyaninschemistry.chemical_compoundReaction rate constantchemistryBenzyl CompoundsProton NMRFlash photolysisPhysical and Theoretical Chemistryta116IsomerizationThe Journal of Physical Chemistry A
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Macroalgal responses to ocean acidification depend on nutrient and light levels

2015

Ocean acidification may benefit algae that are able to capitalize on increased carbon availability for photosynthesis, but it is expected to have adverse effects on calcified algae through dissolution. Shifts in dominance between primary producers will have knock-on effects on marine ecosystems and will likely vary regionally, depending on factors such as irradiance (light vs. shade) and nutrient levels (oligotrophic vs. eutrophic). Thus experiments are needed to evaluate interactive effects of combined stressors in the field. In this study, we investigated the physiological responses of macroalgae near a CO2 seep in oligotrophic waters off Vulcano (Italy). The algae were incubated in situ …

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityChlorophyll aFucoxanthininorganicAlkalinityPhotosynthetic efficiency standard errorChlorophyll cNitrogen content per dry mass standard errorLight saturation point standard errorPhenolics allTemperature waterCarbon inorganic dissolvedMacroalgaeCalculated using seacarb after Nisumaa et al 2010Carbon Nitrogen ratioAragonite saturation stateAlkalinity totalallCarbon per dry massSalinity standard errortotalCarbon content per dry mass standard errorPhenolics all standard errorCO2 ventChromistapHMaximum photochemical quantum yield of photosystem II standard errorTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedAntioxidant activity standard errorCarbonate ionMaximum photochemical quantum yield of photosystem IIPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Field experimentstandard errorNitrogen content per dry massElectron transport rate standard errorFucoxanthin standard errorEarth System ResearchViolaxanthinPhenolicsChlorophyll a standard errorCarbon dioxide standard errorPotentiometric titrationCalcite saturation stateCarbon/Nitrogen ratio standard errorNitrogenOchrophytaPotentiometricper dry masswaterChlorophyll c standard errorBenthosAlkalinity total standard errorAntioxidant activityElectron transport rateLight saturation pointOcean Acidification International Coordination Centre OA ICCMacro-nutrientsMediterranean SeaNitrogen per dry massBicarbonate ionTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)Primary production PhotosynthesisSpeciespH standard errorCalcite saturation state standard errorCystoseira compressaCalculated using CO2SYSNon photochemical quenchingCarbon content per dry massCarbonate system computation flagViolaxanthin standard errorPrimary production/PhotosynthesisFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonCarbon/Nitrogen ratioBiomass/Abundance/Elemental compositionTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airAragonite saturation state standard errorCarbon dioxideMacro nutrientsCarbonate ion standard errorSingle speciesFugacity of carbon dioxide water at sea surface temperature wet airPadina pavonicaBiomass Abundance Elemental compositionCoast and continental shelfPhotosynthetic efficiencyBicarbonate ion standard errorNon photochemical quenching standard error
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Seagrass ecosystem response to long-term high CO2 in a Mediterranean volcanic vent

2014

We examined the long-term effect of naturally acidified water on a Cymodocea nodosa meadow growing at a shallow volcanic CO2 vent in Vulcano Island (Italy). Seagrass and adjacent unvegetated habitats growing at a low pH station (pH = 7.65 ± 0.02) were compared with corresponding habitats at a control station (pH = 8.01 ± 0.01). Density and biomass showed a clear decreasing trend at the low pH station and the below- to above-ground biomass ratio was more than 10 times lower compared to the control. C content and delta 13C of leaves and epiphytes were significantly lower at the low pH station. Photosynthetic activity of C. nodosa was stimulated by low pH as seen by the significant increase in…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityChlorophyll ainorganicAlkalinityLight saturation point standard errorPhotosynthetic quantum efficiencyMediterranean Sea Acidification in a Changing Climate MedSeATemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010IrradianceRespiration rate carbonAragonite saturation stateBiomassAlkalinity totalIrradiance standard errortotalCO2 ventCymodocea nodosapHRespirationEpiphytes loadMaximum photochemical quantum yield of photosystem II standard errorNet community production of carbonTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedRespiration rate carbon standard errorCarbonate ionMaximum photochemical quantum yield of photosystem IIPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Net community production of carbon standard errorIlluminance standard errorSoft bottom communitystandard errorCarbon inorganic dissolved standard errorRespiration rateElectron transport rate standard errorEarth System Researchδ13CPhotosynthetic quantum efficiency standard errorField observationChlorophyll a standard errorGross primary production of carbonBiomass standard errorCalcium carbonatePotentiometric titrationCalcite saturation stateShoot densityPotentiometricwaterIlluminanceOxygen standard errorBenthosAlkalinity total standard errorMediterranean Sea Acidification in a Changing Climate (MedSeA)Electron transport rateLight saturation pointOcean Acidification International Coordination Centre OA ICCMediterranean SeaGross primary production of carbon standard errorBicarbonate ionSoft-bottom communityδ13C standard errorTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)Primary production PhotosynthesisSpeciespH standard errorCarbonate system computation flagloadPrimary production/PhotosynthesisFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonBiomass/Abundance/Elemental compositionTreatmentEpiphytes load standard errorOxygenPartial pressure of carbon dioxide water at sea surface temperature wet airEpiphytes loadCarbon dioxideCarbon standard errorEntire communityFugacity of carbon dioxide water at sea surface temperature wet airGroupBiomass Abundance Elemental compositionCoast and continental shelfEpiphytesShoot density standard errorCalcium carbonate standard error
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Chemical and photochemical properties of chloroharmine derivatives in aqueous solutions

2015

Thermal and photochemical stability (ΦR), room temperature UV-vis absorption and fluorescence spectra, fluorescence quantum yields (ΦF) and lifetimes (τF), quantum yields of hydrogen peroxide (ΦH2O2) and singlet oxygen (ΦΔ) production, and triplet lifetimes (τT) have been obtained for the neutral and protonated forms of 6-chloroharmine, 8-chloroharmine and 6,8-dichloroharmine, in aqueous media. When it was possible, the effect of pH and oxygen concentration was evaluated. The nature of electronic transitions of protonated and neutral species of the three investigated chloroharmines was established using Time-Dependent Density Functional Theory (TD-DFT) calculations. The impact of all the fo…

PHOTOCHEMICALGeneral Physics and Astronomychemistry.chemical_elementProtonationTriplet lifetime02 engineering and technology010402 general chemistryPhotochemistry01 natural sciencesOxygenFluorescence//purl.org/becyt/ford/1 [https]chemistry.chemical_compoundCHLOROHARMINE//purl.org/becyt/ford/1.4 [https]MoleculePhysical and Theoretical ChemistryAqueous solutionSINGLET OXYGENMolecular StructureChemistrySinglet oxygenPhotochemicalSinglet oxygenOtras Ciencias QuímicasTRIPLET LIFETIMECiencias QuímicasWaterHydrogen PeroxideQuímica021001 nanoscience & nanotechnologyPhotochemical Processes0104 chemical sciencesOxygenSolutionsHarmineSpectrometry FluorescenceAtomic electron transitionChloroharmineDensity functional theoryAbsorption (chemistry)0210 nano-technologyCIENCIAS NATURALES Y EXACTAS
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Acclimation Potential to High Irradiance of Two Cultivars of Watermelon

2000

The acclimation potential to high irradiance of two cultivars of watermelon, Reina de Corazones and Toro, calculated as the ratio of sun vs. shade activities of O2− and H2O2 scavenging enzymes and non-radiative energy dissipation, was similar. However, Reina de Corazones exhibited a higher capacity in absolute terms for photoprotection (harmless dissipation of absorbed light energy at PS 2 and ascorbate and O2− and H2O2 scavenging enzymes) suggesting a larger resistance of this cultivar to high irradiance. This could be seen as smaller decreases in fruit productivity and in lower oxidative injury as probed by malondialdehyde content in sun plants of Reina de Corazones than in Toro plants. A…

Photosystem IICitrullus lanatusbiologyChemistryNon-photochemical quenchingfungifood and beveragesPlant ScienceHorticulturebiology.organism_classificationAcclimatizationHorticulturechemistry.chemical_compoundChlorophyllPhotoprotectionBotanyCultivarShadingBiologia plantarum
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Retrieval of sun-induced fluorescence using advanced spectral fitting methods

2015

Abstract The FLuorescence EXplorer (FLEX) satellite mission, candidate of ESA's 8th Earth Explorer program, is explicitly optimized for detecting the sun-induced fluorescence emitted by plants. It will allow consistent measurements around the O2-B (687 nm) and O2-A (760 nm) bands, related to the red and far-red fluorescence emission peaks respectively, the photochemical reflectance index, and the structural-chemical state variables of the canopy. The sun-induced fluorescence signal, overlapped to the surface reflected radiance, can be accurately retrieved by employing the powerful spectral fitting technique. In this framework, a set of fluorescence retrieval algorithms optimized for FLEX ar…

PhysicsMETIS-314125Spectrometerbusiness.industryRetrieval algorithmSpectral fitting methodSoil ScienceGeologyFull fluorescence spectrumPhotochemical Reflectance IndexFluorescenceSpectral linen/a OA procedureFLEX missionOpticsSun-induced fluorescenceRadianceRadiative transferSatelliteComputers in Earth SciencesbusinessAbsorption (electromagnetic radiation)Remote sensing
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Porphyrin amino acids-amide coupling, redox and photophysical properties of bis(porphyrin) amides.

2013

New trans-AB2C meso-substituted porphyrin amino acid esters with meso-substituents of tunable electron withdrawing power (B = mesityl, 4-C6H4F, 4-C6H4CF3, C6F5) were prepared as free amines 3a-3d, as N-acetylated derivatives Ac-3a-Ac-3d and corresponding zinc(II) complexes Zn-Ac-3a-Zn-Ac-3d. Several amide-linked bis(porphyrins) with a tunable electron density at each porphyrin site were obtained from the amino porphyrin precursors by condensation reactions (4a-4d) and mono- and bis(zinc(II)) complexes Zn(2)-4d and Zn(1)Zn(2)-4d were prepared. The electronic interaction between individual porphyrin units in bis(porphyrins) 4 is probed by electrochemical experiments (CV, EPR), electronic abso…

PorphyrinsAbsorption spectroscopyMetalationchemistry.chemical_elementZincPhotochemistryRedoxlaw.inventionInorganic Chemistrychemistry.chemical_compoundlawAmidePolymer chemistryOrganometallic CompoundsAmino AcidsElectron paramagnetic resonanceMolecular StructureElectron Spin Resonance SpectroscopyCondensation reactionPhotochemical ProcessesPorphyrinAmidesZincchemistryQuantum TheoryOxidation-ReductionDalton transactions (Cambridge, England : 2003)
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On the Intrinsically Low Quantum Yields of Pyrimidine DNA Photodamages: Evaluating the Reactivity of the Corresponding Minimum Energy Crossing Points

2020

The low quantum yield of photoformation of cyclobutane pyrimidine dimers and pyrimidine-pyrimidone (6-4) adducts in DNA bases is usually associated with the presence of more favorable nonreactive decay paths and with the unlikeliness of exciting the system in a favorable conformation. Here, we prove that the ability of the reactive conical intersection to bring the system either back to the absorbing conformation or to the photoproduct must be considered as a fundamental factor in the low quantum yields of the mentioned photodamage. In support of the proposed model, the one order of magnitude difference in the quantum yield of formation of the cyclobutane thymine dimer with respect to the t…

PyrimidineUltraviolet RaysQuantum yieldPyrimidine dimer010402 general chemistryPhotochemistry01 natural sciencesNucleobaseAdductCyclobutanechemistry.chemical_compound0103 physical sciencesComputer SimulationGeneral Materials SciencePhysical and Theoretical Chemistry010304 chemical physicsChemistryDNAConical intersectionPhotochemical Processes0104 chemical sciences3. Good healthThymineEstructura químicaPyrimidine DimersFisicoquímica
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Pyrrolo[3,4-h]quinolinones a new class of photochemotherapeutic agents

2011

Abstract Pyrrolo[3,4- h ]quinolin-2-ones were synthesized as nitrogen isosters of the angular furocoumarin angelicin, with the aim of obtaining new photochemotherapeutic agents with increased antiproliferative activity and lower undesired toxic effects. A versatile synthetic pathway was approached to allow the isolation of derivatives of the new ring system with a good substitution pattern on the pyrrole moiety. Photobiological screenings of the new compounds revealed a potent phototoxic effect and a great UVA dose dependence, reaching IC 50 values at submicromolar level. The induced cellular photocytotoxicity was related to apoptosis with the involvement of mitochondria and lysosomes, alte…

Pyrrolo[3; 4-h]quinolinones; Angelicin heteroanalogues; Photochemotherapeutic agents; PhototoxicityStereochemistryClinical BiochemistryMembrane lipid peroxidationPharmaceutical ScienceHL-60 CellsPhosphatidylserinesQuinolonesMitochondrionBiochemistryPhototoxicityJurkat CellsStructure-Activity Relationshipchemistry.chemical_compoundPhotochemotherapeutic agentsAngelicinCell Line TumorDrug DiscoveryHumansMoietyFluorometryPyrrolesPyrrolo[3Molecular BiologyPyrrolePyrrolo[34-h]quinolinoneFurocoumarinCell CycleOrganic Chemistry4-h]quinolinonesDNAPhotochemical ProcessesSettore CHIM/08 - Chimica FarmaceuticaAngelicin heteroanaloguesPhotochemotherapeutic agentPhotochemotherapychemistryApoptosisMolecular MedicineLipid PeroxidationPhototoxicityAngelicin heteroanalogueSubcellular FractionsBioorganic & Medicinal Chemistry
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