Search results for "Photometry"

showing 10 items of 797 documents

Infrared Difference Spectroscopy of Proteins: From Bands to Bonds

2020

Infrared difference spectroscopy probes vibrational changes of proteins upon their perturbation. Compared with other spectroscopic methods, it stands out by its sensitivity to the protonation state, H-bonding, and the conformation of different groups in proteins, including the peptide backbone, amino acid side chains, internal water molecules, or cofactors. In particular, the detection of protonation and H-bonding changes in a time-resolved manner, not easily obtained by other techniques, is one of the most successful applications of IR difference spectroscopy. The present review deals with the use of perturbations designed to specifically change the protein between two (or more) functional…

Spectrophotometry Infrared010405 organic chemistryInfraredChemistryMembrane ProteinsWaterHydrogen BondingProtonationGeneral ChemistryNanosecond010402 general chemistryVibration01 natural sciences0104 chemical sciencesIsotopic labelingChemical physicsMutagenesis Site-DirectedSide chainAnimalsHumansMoleculeAmino AcidsSpectroscopyRotational–vibrational couplingChemical Reviews
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Rapid determination of baicalin and total baicalein content in Scutellariae radix by ATR-IR and NIR spectroscopy

2013

In this study methods for the quantification of baicalin and total baicalein in Scutellariae radix with near infrared (NIR) spectroscopy and attenuated-total-reflectance mid-infrared (ATR-IR) spectroscopy in hyphenation with multivariate analysis were developed and compared. The reference analysis was performed by high performance liquid chromatography coupled to diode array detection (HPLC-DAD). Different pretreatments like standard normal variate (SNV), multiplicative scatter correction (MSC), first and second derivative Savitzky-Golay were applied on the spectra to optimize the calibrations. A principal component analysis was performed with both spectroscopic methods to distinguish wild …

Spectrophotometry InfraredATR-IRAnalytical chemistryPlant RootsHigh-performance liquid chromatographyArticleAnalytical Chemistrychemistry.chemical_compoundScutellariae radixScutellariae radixBaicalinLeast-Squares AnalysisSpectroscopySecond derivativeFlavonoidsPrincipal Component AnalysisChromatographybiologyNear-infrared spectroscopyNIRBaicaleinbiology.organism_classificationBaicaleinchemistryFlavanonesScutellaria baicalensisBaicalinScutellaria baicalensisTalanta
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Potent Aroma Compounds of Two Red Wine Vinegars

2000

Gas chromatography olfactometry (GCO) was used to determine key aroma compounds of two red wine vinegars. Sensory analysis was performed to choose the best neutralization agent of acetic acid (NaOH or MgO) and to test representativeness of four extracts obtained by different methods (dichloromethane extraction, XAD-2, mixture of XAD-2 and XAD-7, and Extrelut resins extraction). Neutralization with NaOH followed by dichloromethane extraction was selected to extract volatile compounds of vinegars. Key odorant compounds were determined by GCO based on detection frequency with 13 people. In the two red wine vinegars, 13 odors were perceived by at least 70% of the panelists, and 8 compounds amon…

Spectrophotometry InfraredAcrylic ResinsWine01 natural sciencesGas Chromatography-Mass SpectrometryButyric acidAcetic acidchemistry.chemical_compound0404 agricultural biotechnology[SDV.IDA]Life Sciences [q-bio]/Food engineeringComputingMilieux_MISCELLANEOUSAromaAcetic AcidDichloromethaneWineChromatographybiology010401 analytical chemistryExtraction (chemistry)04 agricultural and veterinary sciencesGeneral Chemistry[SDV.IDA] Life Sciences [q-bio]/Food engineeringbiology.organism_classification040401 food science0104 chemical scienceschemistryOdorPolystyrenesIon Exchange ResinsGas chromatographyGeneral Agricultural and Biological SciencesJournal of Agricultural and Food Chemistry
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Gas phase infrared multiple photon dissociation spectra of positively charged sodium bis(2-ethylhexyl)sulfosuccinate reverse micelle-like aggregates

2011

The capability of infrared multiple photon dissociation (IRMPD) spectroscopy to gain structural information on surfactant-based supramolecular aggregates has been exploited to elucidate intermolecular interactions and local organization of positively charged sodium bis(2-ethylhexyl)sulfosuccinate (AOTNa) aggregates in the gas phase. A detailed analysis of the stretching modes of the AOTNa CO and SO(3)(-) head groups allows one to directly probe their interactions with sodium counterions and to gain insight in their organization within the aggregate. Similarities and differences of the IRMPD spectra as compared to the infrared absorption spectrum of micellized AOTNa in CCl(4) have been analy…

Spectrophotometry InfraredAnalytical chemistryInfrared spectroscopy010402 general chemistryPhotochemistry01 natural sciencesMicelleDissociation (chemistry)Fragmentation (mass spectrometry)IRMPD gas phase AOTMaterials ChemistryMoleculeInfrared multiphoton dissociationPhysical and Theoretical ChemistryMicellesSettore CHIM/02 - Chimica Fisicachemistry.chemical_classificationDioctyl Sulfosuccinic AcidPhotonsChemistryLasers010401 analytical chemistryIntermolecular force0104 chemical sciencesSurfaces Coatings and FilmsGasesCounterionThe journal of Physical Chemistry. B
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Pyrocoll, an Antibiotic, Antiparasitic and Antitumor Compound Produced by a Novel Alkaliphilic Streptomyces Strain

2003

A new secondary metabolite was detected in the culture extract of Streptomyces sp. AK 409 by HPLC-diode-array screening. The metabolite was identified as pyrocoll, which is known to be a constituent of cigarette smoke. Pyrocoll is known as a synthetic compound, but until now had not been isolated as a natural product from a microorganism. The compound showed biological activity against various Arthrobacter strains, filamentous fungi, several pathogenic protozoa, and some human tumor cell lines.

Spectrophotometry InfraredAntiparasiticmedicine.drug_classMetaboliteAntiprotozoal AgentsMicrobial Sensitivity TestsSecondary metaboliteStreptomycesMass SpectrometryMicrobiologyMicechemistry.chemical_compoundArthrobacterDrug DiscoverymedicineAnimalsHumansPyrrolesNuclear Magnetic Resonance BiomolecularChromatography High Pressure LiquidSoil MicrobiologyAntibacterial agentPharmacologyAntibiotics AntineoplasticbiologyStreptomycetaceaebiology.organism_classificationStreptomyceschemistryFermentationChromatography GelActinomycetalesDrug Screening Assays AntitumorHeLa Cellsmedicine.drugThe Journal of Antibiotics
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Metal complexes of the carbonic anhydrase inhibitor methazolamide (Hmacm). Crystal structure of the Zn(macm)2 (NH3)2. Anticonvulsant properties of th…

1995

Complexes of Co(II), Cu(II), and Zn(II) with deprotonated methazolamide and ammonia are synthesized and characterized. The complex Zn(macm)2(NH3)2 crystallizes in the monoclinic C2/c space group with a = 13.468(1), b = 6.759(1), c = 23.014(2) A, beta = 90.27(1), and Z = 4. The structure was refined to R = 0.049 (Rw = 0.053). The Zn(II) ion is coordinated to two deprotonated sulfonamido nitrogen atoms of the macm- ligand and two nitrogen atoms of the ammonia ligands in a distorted tetrahedron. The Zn(macm)2(NH3)2 complex is shown to be a simple model for the methazolamide inhibition of CA. EHMO calculations applied to fractional coordinates of the Zn(macm)2(NH3)2 complex indicate that the at…

Spectrophotometry InfraredCations DivalentInorganic chemistryMethazolamidechemistry.chemical_elementCrystal structureZincCrystallography X-RayBiochemistryInorganic ChemistryMetalDeprotonationmedicineAnimalsMethazolamideHOMO/LUMOMolecular StructureChemistryLigandElectron Spin Resonance SpectroscopyCobaltZincCrystallographyvisual_artvisual_art.visual_art_mediumAnticonvulsantsCoppermedicine.drugMonoclinic crystal systemJournal of Inorganic Biochemistry
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Theoretical calculation of the vibrational spectra of cis-cis-cyclooctadienes in the vapour phase.

2000

The theoretical infrared spectra of 1,3-cis-cis-cyclooctadiene (1,3-COD) and 1,5-cis-cis-cyclooctadiene (1,5-COD), were obtained by ab initio MO calculations at Hartree-Fock level. The results were compared with the available IR experimental spectra of 1,3- and 1,5-COD. The apparent agreement between theoretical and experimental data allows us to exploit two bands, found only in the case of the theoretical spectrum of 1,4-COD, as a tool for identifying 1,4-COD during its synthesis.

Spectrophotometry InfraredChemistryAnalytical chemistryAb initioInfrared spectroscopyCycloparaffinsAtomic and Molecular Physics and OpticsSpectral lineAnalytical ChemistryCyclooctanesModels ChemicalPhase (matter)Physical chemistryInstrumentationSpectroscopyVibrational spectraSpectrochimica acta. Part A, Molecular and biomolecular spectroscopy
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Isolated glyoxylic acid-water 1:1 complexes in low temperature argon matrices

2015

Abstract The 1:1 hydrogen bonded complexes between glyoxylic acid (GA) and water are studied in low temperature argon matrices. Four different complex structures were found in deposited matrices. The lowest energy conformer (T1) of GA was found to form complex, where the water molecule was attached to the opposite side of the intramolecular hydrogen bond in the molecule (T1B). Interestingly, this complex was estimated to be +8.0 kJ mol −1 higher in energy than the most stable structure (T1A), where the water is inserted into the internal hydrogen bond, and also found in solid argon but in smaller abundance. For the second-lowest energy conformer of GA (T2), the two lowest-energy complex str…

Spectrophotometry InfraredHydrogenMolecular Conformationconformerschemistry.chemical_elementVibrationkonformeeritAnalytical Chemistrychemistry.chemical_compoundIsomerismComputational chemistryglyoxylic acidMoleculematriisi isolaatioArgonvärähdysspektroskopiaInstrumentationConformational isomerismta116SpectroscopyGlyoxylic acidhydrogen bondArgonglyoksyylihappoHydrogen bondMatrix isolationGlyoxylatesWatermatrix isolationHydrogen Bondinglaskennallinen kemiacomputational chemistryAtomic and Molecular Physics and OpticsCold TemperatureCrystallographychemistryIntramolecular forcevetysidosSpectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
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Theoretical investigations of the IR spectroscopy of Ni(C(2)S(2)H(2))(2). A case study of the P_VMWCI(2) algorithm including anharmonic effects.

2010

The near infrared (NIR) spectra of bis(ethylene-1,2-dithiolato)nickel, Ni(C(2)S(2)H(2))(2) are fully interpreted here by applying a method developed for efficient automatic computation of both the infrared wave numbers and the intensities. The employed procedure uses parallel variational multiple window configuration interaction wave functions, the so-named P_VMWCI(2) algorithm, which incorporates both the mechanical and the electric anharmonic effects. It is shown that inclusion of anharmonicities is crucial for correctly assigning the fundamental, combination, and overtone vibrational frequencies in the infrared spectrum of the target system, for which conflicting assignments are found in…

Spectrophotometry InfraredInfraredChemistryOvertoneAnharmonicityNear-infrared spectroscopyGeneral Physics and AstronomyInfrared spectroscopyConfiguration interactionModels TheoreticalSpectral lineCoordination ComplexesNickelPhysics::Chemical PhysicsPhysical and Theoretical ChemistryWave functionAlgorithmAlgorithmsPhysical chemistry chemical physics : PCCP
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Magnetic Langmuir-Blodgett films of ferritin with different iron contents.

2006

Magnetic Langmuir-Blodgett films of four ferritin derivatives with different iron contents containing 4220, 3062, 2200, and 1200 iron atoms, respectively, have been prepared by using the adsorption properties of a 6/1 mixed monolayer of methyl stearate (SME) and dioctadecyldimethylammonium bromide (DODA). The molecular organization of the mixed SME/DODA monolayer is strongly affected by the presence of the water-soluble protein in the subphase as shown by pi-A isotherms, BAM images, and imaging ellipsometry at the water-air interface. BAM images reveal the heterogeneity of this mixed monolayer at the air-water interface. We propose that the ferritin is located under the mixed matrix in thos…

Spectrophotometry InfraredIronAnalytical chemistryMicroscopy Atomic ForceLangmuir–Blodgett filmMagnetizationchemistry.chemical_compoundMagneticsAdsorptionStearateEllipsometryMonolayerStearatesElectrochemistryAnimalsGeneral Materials ScienceHorsesSpectroscopybiologyMembranes ArtificialSurfaces and InterfacesCondensed Matter PhysicsFerritinQuaternary Ammonium CompoundschemistryFerritinsbiology.proteinSpectrophotometry UltravioletSuperparamagnetismLangmuir : the ACS journal of surfaces and colloids
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