Search results for "Polarizability"

showing 10 items of 240 documents

Theoretical Modeling on the Reaction Mechanism of p-Nitrophenylmethylphosphate Alkaline Hydrolysis and its Kinetic Isotope Effects

2015

We have studied the alkaline hydrolysis of p-nitrophenylmethylphosphate (p-NPmP) in aqueous solution by means of polarizable continuum models and by hybrid quantum-mechanical/molecular-mechanical (QM/MM) methods. The theoretical predictions of kinetic isotope effects (KIEs) are in very good agreement with the experimental data, confirming a concerted asynchronous molecular mechanism. In addition, comparison of high level DFT theory with semiempirical AM1/d Hamiltonian has allowed checking the reliability of the later to be used in modeling very large molecular models containing phosphorus atoms.

Reaction mechanismAqueous solutionMolecular modelChemistryThermodynamicsKinetic energyComputer Science Applicationssymbols.namesakePolarizabilityKinetic isotope effectPhysics::Atomic and Molecular ClustersMolecular mechanismsymbolsPhysics::Atomic PhysicsPhysical and Theoretical ChemistryHamiltonian (quantum mechanics)Journal of Chemical Theory and Computation
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Variation of polarizability in the [4n+2] annulene series: from [22]- to [66]-annulene.

2008

Using correlated ab initio methods, the polarizability of large [4n + 2]-annulenes is determined, showing that there exists an almost linear relation between the exaltation of magnetic susceptibility (a measure of aromaticity) and an equivalent enlargement of polarizability.

Series (mathematics)ChemistryAb initioGeneral Physics and AstronomyAromaticityAnnuleneMolecular physicsMagnetic susceptibilityMeasure (mathematics)Nuclear magnetic resonancePolarizabilityPhysics::Atomic and Molecular ClustersTheoretical chemistryPhysics::Atomic PhysicsPhysics::Chemical PhysicsPhysical and Theoretical ChemistryPhysical chemistry chemical physics : PCCP
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Host–guest complexes of conformationally flexible C-hexyl-2-bromoresorcinarene and aromatic N-oxides: solid-state, solution and computational studies

2018

Host–guest complexes of C-hexyl-2-bromoresorcinarene (BrC6) with twelve potential aromatic N-oxide guests were studied using single crystal X-ray diffraction analysis and 1H NMR spectroscopy. In the solid state, of the nine obtained X-ray crystal structures, eight were consistent with the formation of BrC6-N-oxide endo complexes. The lone exception was from the association between 4-phenylpyridine N-oxide and BrC6, in that case the host forms a self-inclusion complex. BrC6, as opposed to more rigid previously studied C-ethyl-2-bromoresorcinarene and C-propyl-2-bromoresorcinarene, undergoes remarkable cavity conformational changes to host different N-oxide guests through C–H···π(host) intera…

Solid-stateCrystal structure010402 general chemistry01 natural scienceslcsh:QD241-441lcsh:Organic chemistryPolarizabilitysupramolekulaarinen kemiaresorcinareneshost–guest chemistryHost–guest chemistrylcsh:Scienceta116Biochemistry Biophysics and Structural BiologyC–H···π Interactions010405 organic chemistryChemistryOrganic Chemistryendo/exo complexationSolution phaseditopic receptors0104 chemical sciencesaromatic N-oxidesChemistryCrystallographyProton NMRPolarlcsh:QSingle crystalBeilstein Journal of Organic Chemistry
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The influence of solvent on conformational properties of peptides with Aib residue—a DFT study

2017

The conformational propensities of the Aib residue on the example of two model peptides Ac-Aib-NHMe (1) and Ac-Aib-NMe2 (2), were studied by B3LYP and M06-2X functionals, in the gas phase and in the polar solvents. To verify the reliability of selected functionals, we also performed MP2 calculations for the tested molecules in vacuum. Polarizable continuum models (PCM and SMD) were used to estimate the solvent effect. Ramachandran maps were calculated to find all energy minima. Noncovalent intramolecular interactions due to hydrogen-bonds and dipole attractions between carbonyl groups are responsible for the relative stabilities of the conformers. In order to verify the theoretical results,…

Solvent effect010402 general chemistryDFT calculations01 natural sciencesCatalysisα-Aminoisobutyric acid residueInorganic ChemistryPolarizabilityMoleculePhysics::Chemical PhysicsPhysical and Theoretical ChemistryConformational isomerismX-ray crystallographyQuantitative Biology::BiomoleculesOriginal Paper010405 organic chemistryHydrogen bondChemistryOrganic ChemistryN-methylation0104 chemical sciencesComputer Science ApplicationsSolventCrystallographyConformational analysisComputational Theory and MathematicsIntramolecular forceSolvent effectsRamachandran plotJournal of Molecular Modeling
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Hyper-Rayleigh scattering and two-photon luminescence of phenylamine- indandione chromophores

2012

Based on results of quantum chemical (QC) screening, we put under research several phenylamine indane-1,3-dione derivatives including octupolar NLO chromophore A3BI. According to these calculations, molecular first hyperpolarizability (βHRS) should be enhanced upon replacement of methyl substituents with phenyl groups. Surprisingly, βHRS values obtained in our measurements by hyper-Rayleigh scattering (HRS) are much higher than one could expect from QC. Bearing in mind that two-photon luminescence (TPL) is usual cause for overestimation of βHRS in HRS measurements, we have accomplished investigations of TPL properties of these compounds. All investigated triphenylamine derivatives exhibit s…

StereochemistryChemistryScatteringTwo photon luminescenceHyperpolarizabilityChromophorePhotochemistryTriphenylamineSpectral linesymbols.namesakechemistry.chemical_compoundsymbolsRayleigh scatteringLuminescenceIOP Conference Series: Materials Science and Engineering
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Dinitrogen complexation with main group radicals

2011

In this report we present data from hyperfine sublevel correlation spectroscopy (HYSCORE), an electron paramagnetic resonance (EPR) spectroscopic technique, that reveals weak but distinct interactions between several main group element radicals and physically dissolved dinitrogen in solution. These interactions are the basis for a well-defined coordination of N2 to the paramagnetic centers. The complexes formed are primarily of the van der Waals-type but also feature a non-negligible orbital overlap between dinitrogen and the radicals' SOMO. Our spectroscopic findings are strongly supported by experiments with isotope-labeled 15N2, spectral simulations and quantum chemical and density funct…

Steric effectsChemistryGeneral ChemistryOrbital overlapPhotochemistrylaw.inventionsymbols.namesakeMain group elementComputational chemistryPolarizabilitylawsymbolsDensity functional theoryPhysics::Chemical Physicsvan der Waals forceElectron paramagnetic resonanceHyperfine structureChem. Sci.
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A density functional theory study of uranium(VI) nitrate monoamide complexes.

2011

Density functional theory calculations were performed on uranyl complexed with nitrate and monoamide ligands (L) [UO(2)(NO(3))(2)·2L]. The obtained results show that the complex stability is mainly governed by two factors: (i) the maximization of the polarizability of the coordinating ligand and (ii) the minimization of the steric hindrance effects. Furthermore, the electrostatic interaction between ligands and uranium(vi) was found to be a crucial parameter for the complex stability. These results pave the way to the definition of (quantitative) property/structure relationships for the in silico screening of monoamide ligands with improved extraction efficiency of uranium(vi) in nitrate ac…

Steric effectsLigandExtraction (chemistry)Inorganic chemistryGeneral Physics and Astronomychemistry.chemical_elementUraniumUranylUranium complexes DFT nitrate acidic solutionchemistry.chemical_compoundchemistryNitrateComputational chemistryPolarizabilitySettore CHIM/03 - Chimica Generale E InorganicaDensity functional theoryPhysical and Theoretical ChemistryPhysical chemistry chemical physics : PCCP
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Polarization Force Fields for Peptides Implemented in ECEPP2 and MM2

2000

Abstract The empirical conformational energy program for peptides (ECEPP2) and molecular mechanics (MM2) have been used for the simulation of the For-Gly-NH2 backbone. I propose two different methods for the calculation of the polarization energy term: the polarization procedure by non-interacting induced dipoles (NID) which assumes scalar isotropic point polarizabilities and the polarization scheme by interacting induced dipoles (ID) which calculates tensor effective anisotropic point polarizabilities (method of Applequist). I present a comparative study of ECEPP2 and MM2 + polarization. I discuss molecular mechanics results including the total energy differences, partitional analyses of t…

Steric effectsQuantitative Biology::BiomoleculesChemistryGeneral Chemical EngineeringGeneral ChemistryDihedral angleCondensed Matter PhysicsPolarization (waves)Molecular physicsMaxima and minimaDipoleComputational chemistryPolarizabilityModeling and SimulationIntramolecular forceGeneral Materials ScienceAnisotropyInformation SystemsMolecular Simulation
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Triphenyl moieties as building blocks for obtaining molecular glasses with nonlinear optical activity

2012

The incorporation of trityl and triphenylsilyl groups into low molecular weight molecules allows the formation of stable molecular glasses. A series of materials based on the N-phenyldiethanolamine core was synthesized bearing different azobenzenes and benzylydene-1,3-indandione as active chromophores. Molecular hyperpolarizability of the synthesized compounds was calculated by a restricted Hartree–Fock method with basis 6-31G(d,p) and measured in solutions by hyper-Rayleigh scattering. Non-linear optical (NLO) activity of the thin glassy films was confirmed after a corona poling procedure. Thermal sustainability of the NLO response of up to 85 °C was achieved. Quantum chemical calculations…

Steric effectsScatteringChemistryMaterials ChemistryHyperpolarizabilityMoietyMoleculeOrganic chemistryPhysical chemistryGeneral ChemistryChromophoreGlass transitionCorona polingJournal of Materials Chemistry
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Static dielectric constant, viscosity, and structure of pure isomeric pentanols

1981

Static dielectric constants, viscosities, densitites and refractive indices of 2-pentanol, 3-pentanol, 2-methyl-1-butanol, 3-methyl-1-butanol and 2-methyl-2-butanol were measured at 15, 25, 35 and 45°C. These results together with the previous data on n-pentanol have been analyzed in terms of the Kirkwood correlation factor g k and of the energy of activiation for viscous flow. With the exception of 2-methyl-2-butanol, g k was found to be greater than unity. These results show that the monomeric units of isomeric pentanols interact by means of hydrogen bonding to form dynamic structures essentially of two types: linear chains where co-association raises the total polarizability and cyclic d…

Steric effectschemistry.chemical_classificationChemistryHydrogen bondBiophysicsThermodynamicsDielectricBiochemistryDipoleViscosityPolarizabilityComputational chemistryMoleculePhysical and Theoretical ChemistryMolecular BiologyAlkylJournal of Solution Chemistry
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