Search results for "Polynucleotides"

showing 5 items of 15 documents

Surface-Enhanced Raman Study of the Interactions between Tripodal Cationic Polyamines and Polynucleotides

2011

Raman and surface-enhanced Raman spectra of new DNA/RNA-binding compounds consisting of three imidazole (Im) and three pyridine (Py) rings connected by tripodal polyaminomethylene linkages were obtained by the near-infrared excitation at 1064 nm. Study of interactions of Im and Py polyamines with single-stranded RNA polynucleotides (poly A, poly G, poly C, poly U), double-stranded DNA polynucleotides (poly dAdT-poly dAdT, poly dGdC-poly dGdC) and calf thymus DNA (ct-DNA) by surface-enhanced Raman spectroscopy (SERS) reveals unambiguous enhancement of the Raman scattering from the small molecules as well as appearance of new bands in spectra associated mainly with nucleobases. The SERS exper…

PyrimidinePyridinesStereochemistryGuaninePolynucleotidesSpectrum Analysis RamanBiochemistryAnalytical ChemistryNucleobasechemistry.chemical_compoundsymbols.namesakePolyaminesElectrochemistryAnimalsEnvironmental ChemistryImidazoleSpectroscopyImidazolesAromaticityDNAsurface-enhanced Raman spectroscopy ; polyamines ; polynucleotides ; DNAchemistryPolynucleotidesymbolsRNACattleRaman spectroscopyDNA
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Ribonuclease H levels in herpes simplex virus-infected cells.

1980

Two forms of ribonuclease H (RNase H) have been identified both in uninfected and Herpes Simplex virus (HSV-)infected BHK cells. Identical RNase H species were detected in control- as well as in infected cells. RNase H I and II have not been found to be associated both with host cell DNA polymerase alpha and beta and HSV-induced DNA polymerase. Infection of BHK cells with HSV type 1 does not lead to a pronounced alteration of RNase H II activity but to an increase (3-fold) of the extractable RNase H I activity. RNase H I activity increases to a maximum between 8-10 hours p.i.; the bulk of HSV-DNA synthesis occurs between 6-8 hours p.i. From these experiments we draw the preliminary conclusi…

Simplexvirusfood.ingredientDNA polymerasevirusesPolynucleotidesmedicine.disease_causeKidneyIsozymeCell LineSubstrate SpecificityfoodRibonucleasesVirologyCricetinaeBaby hamster kidney cellmedicineAnimalsSimplexvirusRNase HbiologyGeneral MedicineVirologyMolecular biologyIsoenzymesMolecular WeightHerpes simplex virusCell culturePolynucleotideEthylmaleimideDNA Viralbiology.proteinArchives of virology
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Polynucleotide differentiation using hybrid solid-state nanopore functionalizing with α-hemolysin

2019

We report results from full atomistic molecular dynamics simulations on the properties of biomimetic nanopores. This latter result was obtained through the direct insertion of an α-hemolysin protein inside a hydrophobic solid-state nanopore. Upon translocation of different DNA strands, we demonstrate here that the theoretical system presents the same discrimination properties as the experimental one obtained previously. This opens an interesting way to promote the stability of a specific protein inside a solid nanopore to develop further biomimetic applications for DNA or protein sequencing.

Specific proteinPolynucleotidesSolid-state02 engineering and technologyMolecular Dynamics Simulation010402 general chemistry01 natural sciencesHemolysin ProteinsNanoporesMolecular dynamicschemistry.chemical_compoundProtein sequencingBiomimeticsAmino Acid SequenceChemistryHemolysinDNAGeneral Chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics0104 chemical sciencesNanoporePolynucleotideBiophysics0210 nano-technologyHydrophobic and Hydrophilic InteractionsDNASoft Matter
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RNA dependent DNA polymerase in cells of xeroderma pigmentosum

1971

Abstract Cells from X.P. ∗ skin contain an RNA dependent DNA polymerase, while in cells from normal skin this enzyme is lacking. This finding stimulates the thought that carcinogenesis in X.P. cells is due to an infection with an oncogenic RNA virus.

Xeroderma pigmentosumHepatitis B virus DNA polymeraseDNA polymeraseDNA polymerase IIDeoxyribonucleotidesPolynucleotidesBiophysicsRNA-dependent RNA polymeraseTritiummedicine.disease_causeRauscher VirusBiochemistryMicemedicineAnimalsChemical PrecipitationHumansMolecular BiologySkinchemistry.chemical_classificationXeroderma Pigmentosumintegumentary systembiologyRNA virusDNATemplates GeneticCell BiologyRibonucleotidesmedicine.diseasebiology.organism_classificationVirologyMolecular biologyStimulation ChemicalEnzymechemistryAmmonium SulfateDNA Nucleotidyltransferasesbiology.proteinRNAFemaleGuanosine TriphosphateCarcinogenesisBiochemical and Biophysical Research Communications
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The CdCl2 effects on synthetic DNAs encaged in the nanodomains of a cationic water-in-oil microemulsion

2011

The present work is dedicated to the study of the interactions of CdCl(2) with the synthetic polynucleotides polyAT and polyGC confined in the nanoscopic aqueous compartment of the water-in-oil microemulsion CTAB/pentanol/hexane/water, with the goal to mimic in vitro the situation met by the nucleic acids in vivo. In biological structures, in fact, very long strings of nucleic acids are segregated into very small compartments having a radius exceedingly smaller than the length of the encapsulated macromolecule. For comparison, the behaviour of polyGC was also studied in aqueous solutions of matched composition. The conformational and thermal stabilities of both polynucleotides enclosed in t…

inorganic chemicalsnanodomaincadmiumPolynucleotideswater-in-oil microemulsion; cadmium; model polynucleotidesGeneral Physics and AstronomyDissociation (chemistry)model polynucleotideschemistry.chemical_compoundCadmium ChlorideHexanesOrganic chemistryMicroemulsionPhysical and Theoretical ChemistryAqueous solutionconformational transitionCetrimoniumChemistryCationic polymerizationWaterDNAHexaneUV and CD spectroscopiesreverse micelleChemical engineeringwater-in-oil microemulsionPolynucleotideCetrimonium CompoundsNucleic acidCationic w/o microemulsionEmulsionssynthetic polynucleotideOilsMacromolecule
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