Search results for "Populus"

showing 10 items of 23 documents

Transcriptome analysis of the Populus trichocarpa–Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under N…

2017

Nutrient transfer is a key feature of the arbuscular mycorrhizal (AM) symbiosis. Valuable mineral nutrients are transferred from the AM fungus to the plant, increasing its fitness and productivity, and, in exchange, the AM fungus receives carbohydrates as an energy source from the plant. Here, we analyzed the transcriptome of the Populus trichocarpa-Rhizophagus irregularis symbiosis using RNA-sequencing of non-mycorrhizal or mycorrhizal fine roots, with a focus on the effect of nitrogen (N) starvation. In R. irregularis, we identified 1,015 differentially expressed genes, whereby N starvation led to a general induction of gene expression. Genes of the functional classes of cell growth, memb…

0106 biological sciences0301 basic medicineRhizophagus irregularisMICROBE INTERACTIONSPhysiologyarbuscule[SDV]Life Sciences [q-bio]racine finePlant Science01 natural sciencesnitrogenTranscriptomeGene Expression Regulation PlantMycorrhizaeLOTUS-JAPONICUSGLOMUS-INTRARADICESPlant ProteinsGENE-EXPRESSION2. Zero hungerazotePHOSPHATE TRANSPORTERAMMONIUM TRANSPORTERSorgan transplantationGeneral Medicinefood shortageMedicago truncatulaArbuscular mycorrhizasymbiose mycorhiziennePopulusfamineEnergy sourceARBUSCULAR MYCORRHIZABiologySULFUR STARVATION03 medical and health sciencesPHOSPHORUS ACQUISITIONSymbiosistransport de nutrimentsBotanySymbiosisGene Expression Profilingblack cottonwoodCell Biologybiology.organism_classificationMEDICAGO-TRUNCATULATransplantationpopulus trichocarpa030104 developmental biologyMembrane biogenesis010606 plant biology & botanytransplantation
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Landscape structure influences browsing on a keystone tree species in conservation areas

2020

Aspen is a keystone species in boreal forests. The future of aspen in many conservation areas is threatened by ungulate browsing. Our aim was to study the effect of browsing on aspen regeneration and population structure in conservation areas in Central Finland, and the effect of surrounding landscape structure on browsing. Aspen density varied greatly among and within conservation areas. In about half of the conservation areas, middle-sized aspens were scarce or missing, which indicates heavy browsing in the recent past. In addition, the number of dead, large aspens in advanced decay stages were rare. Browsing pressure varied greatly among the areas, but on average, a bit more than half of…

0106 biological sciencesAlces alcesUngulatehirvihaapaBiodiversityManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciencespuulajitmaisemaboreal forestRegeneration (ecology)Keystone specieslahopuutPopulus tremulaNature and Landscape ConservationbiodiversitydisturbancebiologyEcologyTaigaForestrylandscapebiology.organism_classificationmetsätbiodiversiteettimetsiensuojeluGeographyboreaalinen vyöhykeDisturbance (ecology)Local extinctionThreatened species010606 plant biology & botany
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Lichen communities on Populus   tremula are affected by the density of Picea   abies

2021

Questions Aspen (Populus tremula) is declining in the old‐growth forests of boreal Fennoscandia. This threatens the numerous taxa that are dependent on old aspens, including many epiphytic lichens. Potential methods to aid epiphytic lichens on aspen are centered around treatments which affect the density of Norway spruce (Picea abies). In this study, we investigated how epiphytic lichen communities on aspen are affected by the variation of spruce density in the immediate vicinity of the focal aspen. Location Southern boreal forests in Finland. Methods We recorded the occurrence of lichens from 120 aspens in 12 semi‐natural forest sites. We used spruce basal area as the measure for spruce de…

0106 biological scienceshaapaBiodiversityEcological succession01 natural sciencestiheysvanhat metsätboreal forestsLichenFinlandbiodiversitysienitiededensitygeography.geographical_feature_categoryEcologybiologyjäkälätEcologyTaigaesiintyminenOld-growth forestekologiasuccessionold growth forestsboreaalinen vyöhykeEuropean aspenNorway spruceboreal zoneold-growth forestsvuorovaikutuslichen communitiesEcology (disciplines)epiphytic lichenscyanolichensinteractionManagement Monitoring Policy and Lawlichen010603 evolutionary biologyred‐listed speciessuojelualueetoccurenceSouthern FinlandPopulus tremulaNature and Landscape ConservationgeographyCommunityPicea abiesPicea abies15. Life on landbiology.organism_classificationbiodiversiteettimycologyprotected areasmetsäkuusired-listed speciescommunity ecology010606 plant biology & botanyApplied Vegetation Science
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Bacterial diversity associated with poplar trees grown on a Hg-contaminated site: Community characterization and isolation of Hg-resistant plant grow…

2018

International audience; Industrial waste dumps are rarely colonized by vegetation after they have been abandoned, indicating biological infertility. Revegetation of industrial tailings dumps is thus necessary to prevent wind erosion, metal leaching and has been shown to restore soil functions and ecosystem services. However, little is known about the microbial colonization and community structure of vegetated tailings following the application of restoration technologies. In this study, we investigated the rhizosphere and phyllosphere bacterial communities of a poplar tree plantation within a phytomanagement-based restoration program of a Hg-contaminated site. We used Illumina-based sequenc…

0301 basic medicineEnvironmental EngineeringMercury-resistant bacteriaMicroorganismPlant DevelopmentBiology03 medical and health sciencesBotanySoil PollutantsEnvironmental ChemistryRevegetationWaste Management and DisposalMicrobial inoculantSoil MicrobiologyPoplar habitatsPhytomanagement[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hungerTrace elementsBiomass (ecology)RhizosphereBacteriaMercury15. Life on landPlant growth-promoting bacteriaPollutionTailingsBiodegradation EnvironmentalPopulus030104 developmental biologyRhizosphere[SDE.BE]Environmental Sciences/Biodiversity and EcologyPhyllosphereSoil microbiologyEnvironmental MonitoringScience of The Total Environment
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Environmental metabarcoding reveals contrasting microbial communities at two poplar phytomanagement sites

2016

The aim of the present study is to deepen the current understanding of the microbial communities at two poplar phytomanagement sites to reveal the environmental factors that drive the abundance, diversity and composition of microbial communities. A soil analysis revealed that the two soils displayed contrasting physico-chemical characteristics, with significant lower pH and higher Cd, Zn and Mn CaCl2-extractable fractions at Leforest site, compared with Pierrelaye site. The fungal and bacterial community profiles in the poplar roots and soils were assessed through Illumina MiSeq sequencing. Diversity indices and β-diversity measures illustrated that the root microbial communities were well …

0301 basic medicineEnvironmental EngineeringSoil test030106 microbiologyBiologyActinobacteria[ SDV.EE ] Life Sciences [q-bio]/Ecology environment03 medical and health sciencesDiversity indexMycorrhizaeBotanyEnvironmental ChemistryDominance (ecology)DNA Barcoding TaxonomicWaste Management and DisposalSoil MicrobiologyComputingMilieux_MISCELLANEOUS[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hungerAscomycotaBacteriaEcologyMicrobiotaAlphaproteobacteriaFungi15. Life on landbiology.organism_classificationPollutionWaste Disposal Facilities030104 developmental biologyBiodegradation EnvironmentalPopulusSoil waterFranceAcidobacteria
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Impact of poplar-based phytomanagement on soil properties and microbial communities in a metal-contaminated site

2016

Despite a long history of use in phytomanagement strategies, the impacts of poplar trees on the structure and function of microbial communities that live in the soil remain largely unknown. The current study combined fungal and bacterial community analyses from different management regimes using Illumina-based sequencing with soil analysis. The poplar phytomanagement regimes led to a significant increase in soil fertility and a decreased bioavailability of Zn and Cd, in concert with changes in the microbial communities. The most notable changes in the relative abundance of taxa and operational taxonomic units unsurprisingly indicated that root and soil constitute distinct ecological microbi…

0301 basic medicineSoil testMicrobial ConsortiaEnvironmentPlant RootsApplied Microbiology and BiotechnologyMicrobiology[ SDV.EE ] Life Sciences [q-bio]/Ecology environmentSoil03 medical and health sciencesMicrobial ecologyMycorrhizaeSoil PollutantsDominance (ecology)Relative species abundanceComputingMilieux_MISCELLANEOUSEcosystemSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hungerLaccariaEcologybiologyEcologyfungiHigh-Throughput Nucleotide Sequencingfood and beverages15. Life on landbiology.organism_classificationBiodegradation EnvironmentalPopulus030104 developmental biologyAgronomyHabitatPenicillium canescensMetalsSoil fertilityFEMS Microbiology Ecology
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Effect of mycorrhizal inoculation on metal accumulation by poplar leaves at phytomanaged sites

2017

Abstract Phytotechnologies for the management of lands contaminated with potentially toxic elements (PTEs) are considered as gentle alternatives to conventional remediation techniques. During the last few years, phytotechnologies have progressively shifted to phytomanagement, a concept that includes the valorization of the plant biomass produced on the contaminated site. This study aimed at evaluating the mid-term effect of ecto- and endomycorrhizal inoculation on the reduction of PTE mobility in soils and foliar accumulation by two poplar clones, Skado ( Populus trichocarpa x P. maximowiczii ) and I-214 ( P. deltoides x P. nigra ), dedicated to bioenergy purposes. The effects of inoculatio…

2. Zero hunger0106 biological sciencesPopulus trichocarpa[SDV.EE]Life Sciences [q-bio]/Ecology environmentbiologyEnvironmental remediationChemistryInoculationGrowing seasonBiomassPlant Science15. Life on land010501 environmental sciencesbiology.organism_classification01 natural sciencesAbscissionAgronomySoil waterCultivarAgronomy and Crop ScienceEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS010606 plant biology & botany0105 earth and related environmental sciences
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Distribution, floristic structure and habitat requirements of the riparian forest community Populetum talassicae ass. nova in the Central Pamir-Alai …

2013

This paper discusses the floristic structure, distribution and habitat requirements of a new forest syntaxon, <em>Populetum talassicae </em>ass. nova. The potential range of the <em>Populetum talassicae </em>association comprises the central Pamir-Alai and Tian-Shan Mountains in Middle Asia. The biotope of this community comprises high mountain river valleys and shore zones of mountain lakes situ- ated at elevations between 2200 and 2750 m. Phytocoenoses of the <em>Populetum talassicae </em>association are characterized by a clear predominance in the tree layer of a characteristic species of the association ‒ <em>Populus talassica</em>. Shrubs…

BiotopeMiddle AsiageographyMarshgeography.geographical_feature_categoryforest vegetationbiologyEcologyRange (biology)Populus talassicaalpine vegetationPlant Sciencenew plant associationbiology.organism_classificationFloristicslcsh:QK1-989HabitatJuniperus semiglobosalcsh:BotanyRiparian forestsyntaxonomyUndergrowthActa Societatis Botanicorum Poloniae
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3D spectral imaging with synchrotron Fourier transform infrared spectro-microtomography

2013

We report Fourier transform infrared spectro-microtomography, a nondestructive three-dimensional imaging approach that reveals the distribution of distinctive chemical compositions throughout an intact biological or materials sample. The method combines mid-infrared absorption contrast with computed tomographic data acquisition and reconstruction to enhance chemical and morphological localization by determining a complete infrared spectrum for every voxel (millions of spectra determined per sample).

Chemical imagingmedicine.medical_specialtyMaterials scienceInfrared spectroscopyBiochemistryFourier transform spectroscopyPhysics::GeophysicsMicesymbols.namesakeImaging Three-DimensionalOpticsSpectroscopy Fourier Transform InfraredMicroscopyImage Processing Computer-AssistedmedicineAnimalsHumansFourier transform infrared spectroscopyMolecular BiologyEmbryonic Stem Cellsbusiness.industryX-Ray MicrotomographyCell BiologyWoodSpectral imagingPopulusFourier transformsymbolsbusinessChemical fingerprintingSynchrotronsHairBiotechnologyNature Methods
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Poplar rotation coppice at a trace element-contaminated phytomanagement site: A 10-year study revealing biomass production, element export and impact…

2019

Abstract Growing lignocellulosic crops on marginal lands could compose a substantial proportion of future energy resources. The potential of poplar was explored, by devising a field trial of two hectares in 2007 in a metal-contaminated site to quantify the genotypic variation in the growth traits of 14 poplar genotypes grown in short-rotation coppice and to assess element transfer and export by individual genotypes. Our data led us to conclusions about the genotypic variations in poplar growth on a moderately contaminated site, with the Vesten genotype being the most productive. This genotype also accumulated the least amounts of trace elements, whereas the Trichobel genotype accumulated up…

Crops AgriculturalEnvironmental EngineeringRotation010504 meteorology & atmospheric sciencesRange (biology)Biomass010501 environmental sciencesBiology01 natural sciencesTreesSoilCoppicingNutrientSoil PollutantsEnvironmental ChemistryBiomassWaste Management and DisposalHectareComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences2. Zero hunger[SDV.EE]Life Sciences [q-bio]/Ecology environmentTrace elementSalix15. Life on landWoodPollutionTrace ElementsPlant LeavesBiodegradation EnvironmentalPopulusAgronomyMetalsvisual_artField trial[SDE]Environmental Sciencesvisual_art.visual_art_mediumBark
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