Search results for "Pori"

showing 10 items of 761 documents

Molecular cloning and primary structure of a Rhesus (Rh)-like protein from the marine sponge Geodia cydonium

1997

In humans, the 30,000 M(r) Rhesus (Rh) polypeptide D (RhD) is a dominant antigen (Ag) of the Rh blood group system. To date, an Rh-like protein has been found in chimpanzees, gorillas, gibbons, and rhesus monkeys. Related to the 30,000 M(r) Rh Ag protein are two polypeptides of 50,000 M(r), the human 50,000 M(r) Rh Ag and the RhD-like protein from Caenorhabditis elegans. The function of all these proteins is not sufficiently known. Here we characterize a cDNA clone (GCRH) encoding a putative 57,000 M(r) polypeptide from the marine sponge Geodia cydonium, which shares sequence similarity both to the RhD Ag and the Rh50 glycoprotein. The sponge Rh-like protein comprises 523 aa residues; hydro…

Signal peptideDNA ComplementaryMolecular Sequence DataImmunologyMolecular cloningGeneticsAnimalsHumansAmino Acid SequenceCloning MolecularCaenorhabditis elegansGlycoproteinschemistry.chemical_classificationRh-Hr Blood-Group SystemBase SequenceSequence Homology Amino AcidbiologyProtein primary structurebiology.organism_classificationMolecular biologyPoriferaSpongeTransmembrane domainchemistryGlycoproteinRh blood group systemImmunogenetics
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Sponges (Porifera) as living metazoan witnesses from the Neoproterozoic: biomineralization and the concept of their evolutionary success

2010

Terra Nova, 22, 1–11, 2010 Abstract The emergence of the Metazoa can be dated back to the Neoproterozoic Era which comprises the Cryogenian Period during which two major glaciations occurred, the Sturtian and the Varanger-Marinoan. At that time, the phylum Porifera (sponges) evolved as the first animals and developed a hard skeleton. The two classes of siliceous sponges, the Hexactinellida and the Demospongiae, are already provided with the major genetic repertoire and gene regulatory networks that also exist in modern multicellular animals. Besides these metazoan innovations, the siliceous sponges display one autapomorphic character, silicatein, an enzyme which mediates bio-silica formatio…

Siliceous spongeAutapomorphyPhylum PoriferaEvolutionary biologyEcologyMulticellular animalsPeriod (geology)GeologyBurgess ShaleBiologyBiomineralizationTerra Nova
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Isolation and characterization of two T-box genes from sponges, the phylogenetically oldest metazoan taxon

2003

It is now well established that all metazoan phyla derived from one common ancestor, the hypothetical Urmetazoa. Due to the basal position of Porifera (Demospongiae) in the phylogenetic tree of Metazoa, studies on the mechanisms controlling the development of these animals can provide clues on the understanding of the origin of multicellular animals and on how the first organization of the body plan evolved. In this report we describe the isolation and genomic characterization of two T-box genes from the siliceous sponge Suberites domuncula. The phylogenetic analysis classifies one into the subfamily of Brachyury, Sd-Bra, and the second into the Tbx2 subfamily, Sd-Tbx2. Analyses of the Sd-B…

Siliceous spongeBrachyuryDNA ComplementarySubfamilyMolecular Sequence DataMolecular evolutionPhylogeneticsGeneticsAnimalsProtein IsoformsElectrophoresis Gel Two-DimensionalAmino Acid SequencePhylogenyBase SequencebiologyPhylogenetic treeSequence Analysis DNAAnatomybiology.organism_classificationPoriferaSuberites domunculaAlternative SplicingBody planEvolutionary biologyT-Box Domain ProteinsProtein Processing Post-TranslationalDevelopmental BiologyDevelopment Genes and Evolution
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Formation of silicones mediated by the sponge enzyme silicatein-α

2010

The sponge-restricted enzyme silicatein-α catalyzes in vivo silica formation from monomeric silicon compounds from sea water (i.e. silicic acid) and plays the pivotal role during synthesis of the siliceous sponge spicules. Recombinant silicatein-α, which was cloned from the demosponge Suberites domuncula (phylum Porifera), is shown to catalyze in vitro condensation of alkoxy silanes during a phase transfer reaction at neutral pH and ambient temperature to yield silicones like the straight-chained polydimethylsiloxane (PDMS). The reported condensation reaction is considered to be the first description of an enzymatically enhanced organometallic condensation reaction.

Siliceous spongeMagnetic Resonance SpectroscopySilanesPolydimethylsiloxanebiologyStereochemistrySiliconesSilanesCondensation reactionbiology.organism_classificationCathepsinsRecombinant ProteinsPoriferaInorganic ChemistrySuberites domunculachemistry.chemical_compoundSpongechemistryBiocatalysisAlkoxy groupAnimalsDimethylpolysiloxanesSilicic acidDalton Transactions
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Oxacyclododecindione, a Novel Inhibitor of IL-4 Signaling from Exserohilum rostratum

2008

In a screening program for new metabolites from fungi inhibiting the IL-4 mediated signal transduction, a novel chlorinated macrocyclic lactone, designated as oxacyclododecindione, was isolated from fermentations of the imperfect fungus Exserohilum rostratum. The structure was determined by a combination of spectroscopic techniques. Oxacyclododecindione inhibits the IL-4 induced expression of the reporter gene secreted alkaline phosphatase (SEAP) in transiently transfected HepG2 cells with IC50 values of 20-25 ng/ml (54-67.5 nM). Studies on the mode of action of the compound revealed that the inhibition of the IL-4 dependent signaling pathway is caused by blocking the binding of the activat…

Spectrometry Mass Electrospray IonizationMacrocyclic CompoundsMagnetic Resonance Spectroscopyfood.ingredientBlotting WesternGene ExpressionBiologyTransfectionStructure-Activity Relationshipchemistry.chemical_compoundfoodCell Line TumorDrug DiscoveryHumansTranscription factorSTAT6PharmacologyReporter geneTyrosine phosphorylationTransfectionMolecular biologyExserohilumDNA binding sitechemistryBiochemistryFermentationInterleukin-4Mitosporic FungiSignal transductionSTAT6 Transcription FactorSignal TransductionThe Journal of Antibiotics
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Sulfuric acid caves of Italy: A review

2019

Abstract In Italy, especially along the Apennine Chain, numerous active and inactive sulfuric acid speleogenetic (SAS) caves have been documented in the last two decades. Here we present an overview of these peculiar hypogene systems, illustrating their main geomorphological and mineralogical features, and the microbial signatures observed in the active underground environment. SAS caves are widely distributed in the northern and central Apennines, whereas they are less abundant in the southern Apennines, in the Apulian foreland, in Sicily and in Sardinia. Their location is significantly influenced by lithological and structural rock properties, as they occur in carbonate areas where acidic…

SpeleogenesigeographyCave sulfategeography.geographical_feature_category010504 meteorology & atmospheric sciencesEvaporiteHypogeneSettore GEO/04 - Geografia Fisica E GeomorfologiaGeochemistryKarst010502 geochemistry & geophysicsKarstAlunite01 natural scienceschemistry.chemical_compoundHypogene caveCavechemistryCarbonateSpeleogenesisHypogene caves Speleogenesis Karst Cave sulfatesForeland basinGeology0105 earth and related environmental sciencesEarth-Surface Processes
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Hardening of bio-silica in sponge spicules involves an aging process after its enzymatic polycondensation: evidence for an aquaporin-mediated water a…

2011

Abstract Background Spicules, the siliceous skeletal elements of the siliceous sponges, are synthesized enzymatically via silicatein. The product formed, bio-silica, constitutes their inorganic matrix. It remained unexplored which reactions are involved in molding of the amorphous bio-silica and formation of a solid and rigid biomaterial. Methods Cell and molecular biological techniques have been applied to analyze processes resulting in the hardening of the enzymatically synthesized bio-silica. The demosponge Suberites domuncula has been used for the studies. Results Cell aggregates (primmorphs) from the sponge S . domuncula , grown in the presence of Mn-sulfate, form spicules that compris…

SpiculeAbsorption of waterTime FactorsMolecular Sequence DataBiophysicsMineralogyFluorescent Antibody TechniqueGene Expression02 engineering and technologyAquaporinsBiochemistryPhase TransitionAbsorption03 medical and health sciencesMagnesium SulfateSponge spiculeDemospongeAnimalsAmino Acid SequenceMolecular BiologyPhylogeny030304 developmental biology0303 health sciencesSyneresisbiologySequence Homology Amino AcidChemistryReverse Transcriptase Polymerase Chain ReactionBiomaterialSpectrometry X-Ray EmissionWater021001 nanoscience & nanotechnologybiology.organism_classificationSilicon DioxideCathepsinsSuberites domunculaSpongeChemical engineeringMicroscopy Electron Scanning0210 nano-technologySuberitesBiochimica et biophysica acta
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Sponge biosilica formation involves syneresis following polycondensation in vivo.

2011

Syneresis is a process observed during the maturation/aging of silica gels obtained by sol-gel synthesis that results in shrinkage and expulsion of water due to a rearrangement and increase in the number of bridging siloxane bonds. Here we describe how the process of biosilica deposition during spicule ("biosilica" skeleton of the siliceous sponges) formation involves a phase of syneresis that occurs after the enzyme-mediated polycondensation reaction. Primmorphs from the demosponge Suberites domuncula were used to study syneresis and the inhibition of this mechanism. We showed by scanning electron microscopy that spicules added to primmorphs that have been incubated with manganese sulfate …

SpiculeAquaporin02 engineering and technologyAquaporinsBiochemistry03 medical and health scienceschemistry.chemical_compoundDemospongeSponge spiculeSpectroscopy Fourier Transform InfraredAnimalsMolecular Biology030304 developmental biology0303 health sciencesbiologySyneresisSulfatesOrganic ChemistryWater021001 nanoscience & nanotechnologybiology.organism_classificationSilicon DioxideCathepsinsSilicateSuberites domunculaSpongeBiochemistrychemistryGene Expression RegulationManganese CompoundsThermogravimetryBiophysicsMolecular Medicine0210 nano-technologySuberitesChembiochem : a European journal of chemical biology
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Evagination of Cells Controls Bio-Silica Formation and Maturation during Spicule Formation in Sponges

2011

The enzymatic-silicatein mediated formation of the skeletal elements, the spicules of siliceous sponges starts intracellularly and is completed extracellularly. With Suberites domuncula we show that the axial growth of the spicules proceeds in three phases: (I) formation of an axial canal; (II) evagination of a cell process into the axial canal, and (III) assembly of the axial filament composed of silicatein. During these phases the core part of the spicule is synthesized. Silicatein and its substrate silicate are stored in silicasomes, found both inside and outside of the cellular extension within the axial canal, as well as all around the spicule. The membranes of the silicasomes are inte…

SpiculeHistologyMaterials ScienceAquaporinlcsh:MedicineMarine BiologyCytoplasmic GranulesModels BiologicalInorganic ChemistryNatural Materials03 medical and health sciencesSponge spiculeMicroscopy Electron TransmissionAnimal PhysiologyNanotechnologyAnimalslcsh:ScienceBiologyBioinorganic Chemistry030304 developmental biologyNanomaterials0303 health sciencesMultidisciplinarybiologyChemistryVesicleSilicates030302 biochemistry & molecular biologylcsh:RCytoplasmic VesiclesSpectrometry X-Ray EmissionAnatomyMarine TechnologyBiogeochemistrybiology.organism_classificationSilicon DioxideCathepsinsImmunohistochemistrySuberites domunculaChemistryMembraneGeochemistryEvaginationBiophysicslcsh:QSuberitesZoologySuberitesResearch ArticlePLoS ONE
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Localization and Characterization of Ferritin in Demospongiae: A Possible Role on Spiculogenesis

2014

Iron, as inorganic ion or as oxide, is widely used by biological systems in a myriad of biological functions (e.g., enzymatic, gene activation and/or regulation). In particular, marine organisms containing silica structures—diatoms and sponges—grow preferentially in the presence of iron. Using primary sponge cell culture from S. domuncula–primmorphs—as an in vitro model to study the Demospongiae spiculogenesis, we found the presence of agglomerates 50 nm in diameter exclusively inside sponge specialized cells called sclerocytes. A clear phase/material separation is observed between the agglomerates and the initial stages of intracellular spicule formation. STEM-HRTEM-EDX analysis of the agg…

SpiculeIronIron oxidePharmaceutical ScienceNanotechnologyFerric CompoundsArticle<i>Suberites domuncula</i>; primmorphs; iron; ferritin; spiculogenesischemistry.chemical_compoundprimmorphsDrug DiscoveryAnimalslcsh:QH301-705.5Pharmacology Toxicology and Pharmaceutics (miscellaneous)Cells CulturedSclerocyteDiatomsbiologyferritinHematitebiology.organism_classificationSilicon DioxideSuberites domunculaspiculogenesisPoriferaFerritinSuberites domunculaSpongelcsh:Biology (General)chemistryvisual_artFerritinsbiology.proteinBiophysicsvisual_art.visual_art_mediumSuberitesSuberitesMarine Drugs
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