Search results for "Proton"

showing 10 items of 5886 documents

Macrocyclic oligoureas with xanthene and diphenyl ether units

2009

Two cyclic oligoureas with 64- and 80-membered rings in which two sets of three or four rigid xanthene (X) units are connected via flexible diphenyl ether (D) units were synthesized by a stepwise fragment condensation. The compounds were characterized by (1)H NMR and ESI mass spectrometry. The structure of the cyclic octamer (XXXDXXXD) was additionally confirmed by single crystal X-ray analysis. The molecule assumes a strongly folded conformation with distorted C(2)-symmetry, stabilized by intramolecular hydrogen bonds. Surprisingly, intermolecular hydrogen bonds between the macrocycles were not observed. (1)H NMR spectra suggest a C(2) symmetrical conformation of the octamer in solution al…

Models MolecularXantheneMacrocyclic CompoundsMagnetic Resonance SpectroscopyPolymersHydrogen bondChemistryStereochemistryPhenyl EthersOrganic ChemistryDiphenyl etherIntermolecular forceMolecular ConformationCrystallography X-RayBiochemistryCrystallographychemistry.chemical_compoundXanthenesIntramolecular forceProton NMRMoleculeHistone octamerPhysical and Theoretical ChemistryOrganic & Biomolecular Chemistry
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Chemistry and Photochemistry of 2,6-Bis(2-hydroxybenzilidene)cyclohexanone. An Example of a Compound Following the Anthocyanins Network of Chemical R…

2014

The kinetics and thermodynamics of the 2,6-bis(2-hydroxybenzilidene)cyclohexanone chemical reactions network was studied at different pH values using NMR, UV-vis, continuous irradiation, and flash photolysis. The chemical behavior of the system partially resembles anthocyanins and their analogue compounds. 2,6-Bis(2-hydroxybenzilidene)cyclohexanone exhibits a slow color change from yellow to red styrylflavylium under extreme acidic conditions. The rate constant for this process (5 × 10(-5) s(-1)) is pH independent and controlled by the cis-trans isomerization barrier. However, the interesting feature is the appearance of the colorless compound, 7,8-dihydro-6H-chromeno[3,2-d]xanthene, isolat…

Models MolecularXantheneMolecular StructureCyclohexanonesKineticsCyclohexanoneHydrogen-Ion ConcentrationPhotochemical ProcessesPhotochemistryChemical reactionAnthocyaninschemistry.chemical_compoundReaction rate constantchemistryBenzyl CompoundsProton NMRFlash photolysisPhysical and Theoretical Chemistryta116IsomerizationThe Journal of Physical Chemistry A
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Equilibrium, Kinetic, and Computational Studies on the Formation of Cu2+ and Zn2+ Complexes with an Indazole-Containing Azamacrocyclic Scorpiand: Evi…

2015

Cu(2+) and Zn(2+) coordination chemistry of a new member of the family of scorpiand-like macrocyclic ligands derived from tris(2-aminoethyl)amine (tren) is reported. The new ligand (L1) contains in its pendant arm not only the amine group derived from tren but also a 6-indazole ring. Potentiometric studies allow the determination of four protonation constants. UV-vis and fluorescence data support that the last protonation step occurs on the indazole group. Equilibrium measurements in the presence of Cu(2+) and Zn(2+) reveal the formation of stable [ML1](2+), [MHL1](3+), and [ML1(OH)](+) complexes. Kinetic studies on the acid-promoted decomposition of the metal complexes were carried out usi…

Models Molecularchemistry.chemical_classificationAza CompoundsIndazoleIndazolesMacrocyclic CompoundsMolecular StructureLigandPotentiometric titrationProtonationPhotochemistryMedicinal chemistryTautomerCoordination complexInorganic ChemistryKineticsZincchemistry.chemical_compoundchemistryOrganometallic CompoundsQuantum TheoryMoleculeAmine gas treatingPhysical and Theoretical ChemistryCopper
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The Low Barrier Hydrogen Bond in the Photoactive Yellow Protein: A Vacuum Artifact Absent in the Crystal and Solution

2016

Journal of the American Chemical Society 138(51), 16620 - 16631 (2016). doi:10.1021/jacs.6b05609

Models Molecularphotoactive yellow proteinlow-barrier hydrogen bondVacuumHydrogenProtein ConformationLow-barrier hydrogen bondNeutron diffractionchemistry.chemical_elementProtonationCrystallography X-RayPhotoreceptors Microbial010402 general chemistry01 natural sciencesBiochemistryCatalysisColloid and Surface ChemistryProtein structureBacterial Proteins0103 physical sciencesta116Photoactive yellow proteinvetysidokset010304 chemical physicsHydrogen bondChemistryHydrogen BondingGeneral Chemistry5400104 chemical sciencesSolutionsCrystallographyhydrogen bondsddc:540Proton NMRArtifactsJournal of the American Chemical Society
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Toward engineering efficient peptidomimetics. Screening conformational landscape of two modified dehydroaminoacids

2013

Effective peptidomimetics should posses structural rigidity and appropriate interaction pattern leading to potential spatial and electronic matching to the target receptor site. Rational design of such small bioactive molecules could push chemical synthesis and molecular modeling toward faster progress in medicinal chemistry. Conformational properties of N-t-butoxycarbonyl-glycine-(E/Z)-dehydrophenylalanine N′,N′-dimethylamides (Boc-Gly-(E/Z)-ΔPhe-NMe2) in chloroform were studied by NMR and IR spectroscopy. The experimental findings were supported by extensive calculations at DFT(B3LYP, M06-2X) and MP2 levels of theory and the β-turn tendency for both isomers of the studied dipeptide were d…

Models MolecularspectroscopyMagnetic Resonance SpectroscopyMolecular modelProtein ConformationBiophysicsInfrared spectroscopydehydrophenylalanineBiochemistryBiomaterialschemistry.chemical_compoundComputational chemistryAmideStructural rigidityE isomersDipeptideOrganic Chemistryconformational analysisß-turn tendencyRational designGeneral MedicineCarbon-13 NMRSolutionschemistryDFT-GIAO calculationsIRProton NMRPeptidomimeticsPeptides13 C-NMRH-NMRZBiopolymers
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Dynamical Properties of Self-Assembled Surfactant-Based Mixtures: Triggering of One-Dimensional Anomalous Diffusion in Bis(2-ethylhexyl)phosphoric Ac…

2013

The dynamic features of bis(2-ethylhexyl)phosphoric acid (HDEHP)/n-octylamine (NOA) mixtures have been investigated as a function of the NOA mole fraction and temperature by (1)H NMR spectroscopy and rheometry. All data consistently suggest a composition-induced glass-forming behavior. The microscopic factors responsible for this behavior have been highlighted and have been explained in terms of driving forces given by HDEHP-to-NOA proton transfer, the tendency of the resulting species to establish H bonds and to spatially segregate the alkyl chains. The study sheds light on the molecular mechanism responsible for the peculiar behavior of transport properties in such systems and furnishes b…

Models Molecularsurfactant mixtures self-assembly dynamical propertiesProtonAnomalous diffusionMole fractionSelf assembledDiffusionSurface-Active Agentschemistry.chemical_compoundPulmonary surfactantElectrochemistryOrganic chemistryGeneral Materials ScienceAminesPhosphoric acidSpectroscopyAlkylSettore CHIM/02 - Chimica Fisicachemistry.chemical_classificationMolecular StructureRheometryChemistrySurfaces and InterfacesCondensed Matter PhysicsOrganophosphatesThermodynamicsPhysical chemistryRheologyLangmuir
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Nebenreaktionen der radikalisch ausgelösten Cyclisierung von 2,2′-Methylen-bis(4-methyl-1,2-phenylen)-dimethacrylat

1979

2,2′-Methylene-bis(4-methyl-1,2-phenylene) dimethacrylate (1) was reacted with an excess of 2,2′-azoiso-butyronitrile (mole ratio 1:15) highly diluted in boiling benzene. The reaction products were separated by column chromatography. It was found that the 1-cyano-1-methylethyl radical induced the cyclization of 1 to yield the product of a head to tail addition (2) in 55% yield. In addition, the product of a head to head addition (3) was isolated in 4% yield. 35% of 1 reacted in the same way as it has already been observed as suppression of polymerization in the case of p-tolyl methacrylate to give the products 4 and 5. The structures of the products were confirmed by elemental analyses, by …

Mole ratioPolymers and PlasticsChemistryHead to headMethacrylateMedicinal chemistrychemistry.chemical_compoundColloid and Surface ChemistryColumn chromatographyPolymerizationYield (chemistry)Polymer chemistryMaterials ChemistryProton NMRPhysical and Theoretical ChemistryBenzeneColloid and Polymer Science
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Enantioselective Synthesis of Tetrahydroprotoberberines and Bisbenzylisoquinoline Alkaloids from a Deprotonated α-Aminonitrile

2011

Under controlled conditions, 6,7-dimethoxy-1,2,3,4-tetrahydroisoquinoline-1-carbonitrile can be quantitatively deprotonated in the α-position. Its alkylation directly furnishes 3,4-dihydroisoquinolines which can serve as starting materials for the preparation of various alkaloids. Here, the preparation of the benzylisoquinolines (+)-laudanidine, (+)-armepavine, and (+)-laudanosine as well as the tetrahydroprotoberberines (-)-corytenchine and (-)-tetrahydropseudoepiberberine using Noyori's asymmetric transfer hydrogenation are described. The dimeric alkaloids (+)-O-methylthalibrine and (+)-tetramethylmagnolamine were obtained from nonracemic precursors in Ullmann diaryl ether syntheses.

Molecular StructureChemistryBerberine AlkaloidsOrganic ChemistryEnantioselective synthesisStereoisomerismStereoisomerismAlkylationTransfer hydrogenationBenzylisoquinolinesAlkaloidsDeprotonationNitrilesMoleculeOrganic chemistryBenzylisoquinolinesBerberine AlkaloidsThe Journal of Organic Chemistry
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Catalytic Asymmetric Addition of Dimethylzinc to α-Ketoesters, Using Mandelamides as Ligands

2006

[reaction: see text] A strategy based on the control of the electron-donating capabilities of the coordinating groups of the ligand has been applied in the catalytic asymmetric addition of organometallic reagents to ketoesters. Mandelamides having deprotonated alcohol and carboxyamido groups catalyzed the addition of dimethylzinc to alpha-ketoesters with good yields and ee (up to 90%).

Molecular StructureChemistryLigandOrganic ChemistryDimethylzincEstersStereoisomerismAlcoholGeneral MedicineLigandsBiochemistryCombinatorial chemistryCatalysisCatalysisZincchemistry.chemical_compoundDeprotonationReagentMandelic AcidsOrganic chemistryPhysical and Theoretical ChemistryOrganic Letters
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Diatropicity of tetraazanaphthalenes

2006

Tetraazanaphthalenes are diatropic molecules, whose magnetic response to a magnetic field perpendicular to the molecular plane closely resembles that of naphthalene. The out-of-plane component of the magnetic susceptibility tensor and its strong anisotropy can be used as quantifiers of magnetic aromaticity. Maps showing streamlines and modulus of the current density field provide clear evidence for diatropicity of these systems. They also explain the strong anisotropy of carbon and nitrogen magnetic shielding, which is determined by the big out-of-plane component of the nuclear shielding tensor. The electronic ring currents observed in the map deshield the nuclei of ring hydrogens by enforc…

Molecular StructureField (physics)ProtonCondensed matter physicsChemistryChemical shiftStereoisomerismGeneral ChemistryNaphthalenesMagnetic susceptibilityMagnetic fieldMagneticsComputational MathematicsNuclear magnetic resonanceModels ChemicalElectromagnetic shieldingAnisotropyComputer SimulationTensorAnisotropyDiatropicity; tetraazanaphthalenesJournal of Computational Chemistry
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