Search results for "RATES"

showing 10 items of 1636 documents

The stable isotope composition of organic and inorganic fossils in lake sediment records: current understanding, challenges, and future directions

2018

This paper provides an overview of stable isotope analysis (H, C, N, O, Si) of the macro- and microscopic remains from aquatic organisms found in lake sediment records and their application in (palaeo)environmental science. Aquatic organisms, including diatoms, macrophytes, invertebrates, and fish, can produce sufficiently robust remains that preserve well as fossils and can be identified in lake sediment records. Stable isotope analyses of these remains can then provide valuable insights into habitat-specific biogeochemistry, feeding ecology, but also on climatic and hydrological changes in and around lakes. Since these analyses focus on the remains of known and identified organisms, they …

010506 paleontologyArcheologyTaphonomy010504 meteorology & atmospheric sciencesorganic remainsstable isotopessedimentit580 Plants (Botany)01 natural sciencesInorganic remainsäyriäisetIsotope fractionationpiilevätEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesIsotope analysisStable isotopesDiatomsGlobal and Planetary Changeinorganic remainsisotoopitEcologyStable isotope ratioLake ecosystemBiogeochemistryOstracodsGeologyselkärangattomatInvertebratespaleolimnologiaMacrophytelake sedimentLake sedimentostracodsOrganic remainsPaleoecologyEnvironmental science
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The Valanginian isotope event: a complex suite of palaeoenvironmental perturbations.

2011

17 pages; International audience; The Valanginian records a severe crisis of carbonate systems, both on platforms and in the pelagic realm. This crisis is roughly concomitant with the Weissert Event, characterized by a positive δ13C excursion of about 2‰in marine carbonates. However, it is unclear if the response of these two carbonate systems to the global perturbations is contemporaneous, or if they react differently. For this purpose, accumulation rates of pelagic carbonates produced by nannofossils and of platform-derived carbonates have been quantified in a hemipelagic environment (the Vocontian Basin, SE France) that has the potential to record the reaction of both shallow-water and p…

010506 paleontology[SDE.MCG]Environmental Sciences/Global ChangesGeochemistryClimate changeWeathering[ SDU.STU.ST ] Sciences of the Universe [physics]/Earth Sciences/Stratigraphy010502 geochemistry & geophysicsOceanography01 natural sciencesCarbon cyclePaleontologychemistry.chemical_compound[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/GeochemistryClimate changeCarbonate production crisis14. Life underwaterEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesEarth-Surface Processesδ13CExcursionPaleontologyPelagic zoneAccumulation ratesCyclostratigraphy[ SDU.STU.GC ] Sciences of the Universe [physics]/Earth Sciences/Geochemistry[ SDE.MCG ] Environmental Sciences/Global Changeschemistry13. Climate actionValanginian[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyCarbonateGeologyδ13C Weissert Event
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Invertebrate communities of the High Arctic ponds in Hornsund

2016

How environmental conditions influence current distributions of organisms at the local scale in sensitive high Arctic freshwaters is essential to understand in order to better comprehend the cascading consequences of the ongoing climate change. This knowledge is also important background data for paleolimnological assessments of long-term limnoecological changes and in describing the range of environmental variability. We sampled five limnologically different freshwater sites from the Fuglebergsletta marine terrace in Hornsund, southern Svalbard, for aquatic invertebrates. The invertebrate communities were tested against non-climatic environmental drivers (limnological and catchment variabl…

0106 biological sciences010504 meteorology & atmospheric sciencesEcologyEcology010604 marine biology & hydrobiologyaquatic invertebrateslcsh:QE1-996.5Climate change15. Life on landBiology01 natural scienceslcsh:GeologyArcticclimate changeArctic13. Climate action1181 Ecology evolutionary biologypolar lakes14. Life underwaterbird impactEcology Evolution Behavior and Systematics1172 Environmental sciences0105 earth and related environmental sciencesInvertebratePolish Polar Research
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Flore turonienne des silex fossilifères de Châtellerault (Ouest de la France)

2018

International audience; Three new localities yielding fossiliferous flints are reported from the Châtellerault area (Vienne, western France). They include one archaeological site (La Grande Vallée) and two zones with alterite deposits (L’Aunas and Les Bariollières). Broken surfaces of flint nodules show co-occurrence of marine invertebrates such as bryozoans, echinoids (Micraster Agassiz, Orthopsis Cotteau), gastropods (Acteonella d’Orbigny), rudists, and sponges. The association of Acteonella, Micraster and Orthopsis confirms the Turonian age (Upper Cretaceous) of the fossil assemblage. The marine invertebrates co-occur with plant macroremains including fragments of conifer leafy axes such…

0106 biological sciences010506 paleontologyFloraAngiosperms[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryPlantes010603 evolutionary biology01 natural sciencesBrachyphyllumPaleontologyAssemblage (archaeology)Invertébrés marins14. Life underwaterCrétacé supérieur0105 earth and related environmental sciencesInvertebrateMarinebiologyGeneral EngineeringMarine invertebratesPlantes Conifères Angiospermes Invertébrés marins Silex Crétacé supérieur ViennePlants15. Life on landinvertebratesbiology.organism_classificationCretaceousConifèresConifersSilexVienne[ SHS.ARCHEO ] Humanities and Social Sciences/Archaeology and PrehistoryRudistsAngiospermesUpper CretaceousMicrasterPlants Conifers Angiosperms Marine invertebrates Flints Upper Cretaceous VienneFlintsGeologyComptes Rendus Palevol
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Functional assessment of morphological homoplasy in stem-gnathostomes

2021

Osteostraci and Galeaspida are stem-gnathostomes, occupying a key phylogenetic position for resolving the nature of the jawless ancestor from which jawed vertebrates evolved more than 400 million years ago. Both groups are characterized by the presence of rigid headshields that share a number of common morphological traits, in some cases hindering the resolution of their interrelationships and the exact nature of their affinities with jawed vertebrates. Here, we explore the morphological and functional diversity of osteostracan and galeaspid headshields using an innovative approach that combines geometric morphometrics and computational fluid dynamics, thereby constraining the underlying fa…

0106 biological sciences010506 paleontologycomputational fluid dynamicsPaleontologia010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyAnimalsgeometric morphometricsPhylogeny0105 earth and related environmental sciencesGeneral Environmental ScienceAncestorGeneral Immunology and MicrobiologybiologyPhylogenetic treehomoplasyGeneral Medicinebiology.organism_classificationBiological EvolutionGaleaspidaOsteostraciJawPalaeobiologyEvolutionary biologyVertebratesvertebratesGeneral Agricultural and Biological Sciencesstem-gnathostomes
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Ocean acidification at a coastal CO2 vent induces expression of stress-related transcripts and transposable elements in the sea anemone Anemonia viri…

2019

Published version, available at: https://doi.org/10.1371/journal.pone.0210358 Ocean acidification threatens to disrupt interactions between organisms throughout marine ecosystems. The diversity of reef-building organisms decreases as seawater CO2 increases along natural gradients, yet soft-bodied animals, such as sea anemones, are often resilient. We sequenced the polyA-enriched transcriptome of adult sea anemone Anemonia viridis and its dinoflagellate symbiont sampled along a natural CO2 gradient in Italy to assess stress levels in these organisms. We found that about 1.4% of the anemone transcripts, but only ~0.5% of the Symbiodinium sp. transcripts were differentially expressed. Processe…

0106 biological sciences0301 basic medicineAtmospheric ScienceMolecular biologyMarine and Aquatic SciencesGene ExpressionRetrotransposonSea anemone01 natural sciencesAnemoniaSequencing techniquesMobile Genetic ElementsMultidisciplinarybiologyQREukaryotaOcean acidificationAnemoneRNA sequencingGenomicsChemistryRetrotransposonsPhysical SciencesMedicineTranscriptome AnalysisResearch ArticleScienceZoology010603 evolutionary biology03 medical and health sciencesGreenhouse GasesCnidariaGenetic ElementsSea WaterGeneticsVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470Environmental ChemistryAnimalsMarine ecosystemBiology and life sciencesEcology and Environmental SciencesDinoflagellateChemical CompoundsOrganismsTransposable ElementsCorrectionAquatic EnvironmentsComputational BiologyCarbon Dioxidebiology.organism_classificationGenome AnalysisMarine EnvironmentsInvertebratesVDP::Mathematics and natural science: 400::Basic biosciences: 470Research and analysis methods:Genetikk og genomikk: 474 VDP::Marinbiologi:497 VDP::Økologi:488 [VDP]030104 developmental biologySea AnemonesMolecular biology techniquesAtmospheric ChemistryEarth SciencesSeawater
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Survival and gene expression under different temperature and humidity regimes in ants

2017

Short term variation in environmental conditions requires individuals to adapt via changes in behavior and/or physiology. In particular variation in temperature and humidity are common, and the physiological adaptation to changes in temperature and humidity often involves alterations in gene expression, in particular that of heat-shock proteins. However, not only traits involved in the resistance to environmental stresses, but also other traits, such as immune defenses, may be influenced indirectly by changes in temperature and humidity. Here we investigated the response of the ant F. exsecta to two temperature regimes (20 degrees C & 25 degrees C), and two humidity regimes (50% & 75%), for…

0106 biological sciences0301 basic medicineAtmospheric ScienceympäristöAcclimatizationGene Expressionlcsh:MedicinemuutosALFALFA LEAFCUTTING BEEBiochemistryImmune Receptors01 natural sciencesEndocrinologyACCLIMATIONmuurahaisetGene expressionMedicine and Health SciencesIMMUNE-RESPONSEInsulinTRANSCRIPTIONgeeniekspressiolcsh:SciencePOPULATIONHeat-Shock ProteinsProtein MetabolismsopeutuminenPrincipal Component Analysiseducation.field_of_studyImmune System ProteinsMultidisciplinaryBehavior AnimalEcologyolosuhteetTemperaturefood and beveragesANThumanitiesInsectsimmuunijärjestelmä1181 Ecology evolutionary biologyPhysical SciencesMEGACHILE-ROTUNDATAlämpötilaympäristönmuutoksetResearch ArticleNutrient and Storage ProteinsSignal TransductionArthropodaImmunologyPopulationZoologyBiology010603 evolutionary biologyAcclimatization03 medical and health sciencesMeteorologyTwo temperatureStress PhysiologicalGeneticsAnimalseducationGeneProportional Hazards ModelsDiabetic EndocrinologyAntsBEAUVERIA-BASSIANAGene Expression Profilinglcsh:ROrganismshumidityBiology and Life SciencesProteinsHumiditytemperatureHumidityEigenvaluesCell BiologyDESICCATIONInvertebratesHymenopteraHormonesMetabolismAlgebra030104 developmental biologyGene Expression RegulationLinear AlgebraDROSOPHILA-MELANOGASTERkosteusEarth Sciencesgene expressionta1181lcsh:QFormica exsectaDesiccationRESISTANCEMathematics
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Essentiality Is a Strong Determinant of Protein Rates of Evolution during Mutation Accumulation Experiments in Escherichia coli

2016

[EN] The Neutral Theory of Molecular Evolution is considered the most powerful theory to understand the evolutionary behavior of proteins. One of the main predictions of this theory is that essential proteins should evolve slower than dispensable ones owing to increased selective constraints. Comparison of genomes of different species, however, has revealed only small differences between the rates of evolution ofessential and nonessential proteins. In some analyses, these differences vanish once confounding factors are controlled for, whereas in other cases essentiality seems to have an independent, albeit small, effect. It has been argued that comparing relatively distant genomes may entai…

0106 biological sciences0301 basic medicineBiologymedicine.disease_cause010603 evolutionary biology01 natural sciencesGenomeProtein evolutionEvolution Molecular03 medical and health sciencesGeneticsmedicineEscherichia colidN/dSProtein lengthEscherichia coliGeneEcology Evolution Behavior and Systematics2. Zero hungerGeneticsExperimental evolutionGenes EssentialModels GeneticEscherichia coli ProteinsGene Expression Regulation BacterialRates of evolutionMutation AccumulationNeutral theoryEssentiality030104 developmental biologyExperimental evolutionMutationNeutral theory of molecular evolutionGenome BacterialResearch Article
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Hormonal and carbohydrate control of fruit set in avocado ‘Lamb Hass’. A question of the type of inflorescence?

2021

[EN] The avocado tree (Persea americana Mill.) has two types of shoots, indeterminate, which maintain vegetative development from an apical bud, and determinate, which do not have vegetative growth. Indeterminate shoots set fewer fruits than determinate ones, and significantly hasten physiological fruitlet abscission. The competition between vegetative and flower development is accepted as the most reasonable hypothesis to explain the differences. However, our results show that from anthesis until fruit set flowers of indeterminate inflorescences, both those remaining on the tree and those abscised, had a higher sucrose and C6 carbohydrate content than flowers of determinate ones and no dif…

0106 biological sciences0301 basic medicineCarbohydratePerseaCytokininsVegetative reproductionApical dominanceCytokininCarbohydratesHorticulture01 natural sciences03 medical and health sciencesAbscissionAnthesisPRODUCCION VEGETALAuxinFruitingGibberellinbiologyfood and beveragesFlowering shootsbiology.organism_classificationGibberellinsHorticulture030104 developmental biologyInflorescenceFlowering shootPersea americanaShootGibberellin010606 plant biology & botanyScientia Horticulturae
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Comparative Mitogenomics of Leeches (Annelida: Clitellata): Genome Conservation and Placobdella-Specific trnD Gene Duplication.

2015

Mitochondrial DNA sequences, often in combination with nuclear markers and morphological data, are frequently used to unravel the phylogenetic relationships, population dynamics and biogeographic histories of a plethora of organisms. The information provided by examining complete mitochondrial genomes also enables investigation of other evolutionary events such as gene rearrangements, gene duplication and gene loss. Despite efforts to generate information to represent most of the currently recognized groups, some taxa are underrepresented in mitochondrial genomic databases. One such group is leeches (Annelida: Hirudinea: Clitellata). Herein, we expand our knowledge concerning leech mitochon…

0106 biological sciences0301 basic medicineClitellatalcsh:MedicineBiochemistry01 natural sciencesGenomeDatabase and Informatics MethodsRNA TransferGene DuplicationGene OrderInvertebrate GenomicsGene duplicationAnnelidslcsh:SciencePhylogenyEnergy-Producing OrganellesData ManagementGeneticseducation.field_of_studyMultidisciplinaryPhylogenetic treePhylogenetic AnalysisGenomicsGenomic DatabasesMitochondriaNucleic acidsPhylogeneticsGenes MitochondrialPlacobdella parasiticaCellular Structures and OrganellesTransfer RNAResearch ArticleComputer and Information SciencesMitochondrial DNAPopulationBioenergeticsBiologyResearch and Analysis Methods010603 evolutionary biologyEvolution MolecularOpen Reading Frames03 medical and health sciencesPhylogeneticsLeechesGeneticsAnimalsEvolutionary Systematics14. Life underwaterCodonMolecular Biology TechniquesNon-coding RNAeducationMolecular BiologyTaxonomyMolecular Biology Assays and Analysis TechniquesEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesComputational BiologyCell BiologyGenome Analysisbiology.organism_classificationInvertebratesBiological Databases030104 developmental biologyAnimal GenomicsGenome MitochondrialRNAlcsh:QPLoS ONE
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