Search results for "REGULATION"

showing 10 items of 4463 documents

Gibberellin reactivates and maintains ovary-wall cell division causing fruit set in parthenocarpic Citrus species

2016

[EN] Citrus is a wide genus in which most of the cultivated species and cultivars are natural parthenocarpic mutants or hybrids (i.e. orange, mandarin, tangerine, grapefruit). The autonomous increase in GA(1) ovary concentration during anthesis was suggested as being the stimulus responsible for parthenocarpy in Citrus regardless of the species. To determine the exact GA-role in parthenocarpic fruit set, the following hypothesis was tested: GA triggers and maintains cell division in ovary walls causing fruit set. Obligate and facultative parthenocarpic Citrus species were used as a model system because obligate parthenocarpic Citrus sp (i.e. Citrus unshiu) have higher GA levels and better n…

0106 biological sciences0301 basic medicineCitrusCell divisionFruit setCitruFlowersPlant ScienceOrange (colour)BiologyParthenocarpy01 natural sciencesPaclobutrazol03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsGeneticAnthesisCell WallGene Expression Regulation PlantBotanyPRODUCCION VEGETALGeneticsGibberellinPhylogenyFruit treePlant Growth Regulatorfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationGibberellinsUp-RegulationCitrus unshiu030104 developmental biologychemistryFlowerFruitMicroscopy Electron ScanningParthenocarpyGibberellinAgronomy and Crop ScienceCell DivisionFruit tree010606 plant biology & botanyPlant Science
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Identifying Early Warning Signals for the Sudden Transition from Mild to Severe Tobacco Etch Disease by Dynamical Network Biomarkers

2019

This article belongs to the Special Issue The Complexity of the Potyviral Interaction Network.

0106 biological sciences0301 basic medicineComplex systemsSystems biologyPotyvirusDiseaseBiologytobacco etch virusSeverity of Illness Index01 natural sciencesArticlePlant VirusesTranscriptomeViral Proteins03 medical and health sciencesPlant-virus interactionpotyvirusGene Expression Regulation PlantVirologyProtein Interaction MappingTobaccoGene Regulatory NetworksProtein Interaction Mapscomplex systemsGenePlant DiseasesGeneticsTransition (genetics)Tobacco etch virusGene Expression Profilingsystems biologyDNBBiotic stressresponse to infectionbiology.organism_classificationplant-virus interactionTobacco etch virusphase transitionsprotein-protein interaction networks030104 developmental biologyInfectious DiseasesPhase transitionsHost-Pathogen InteractionsMutationBiomarker (medicine)BiomarkersSignal Transduction010606 plant biology & botanyViruses
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Plant stress biology in epigenomic era.

2020

Recent progress in "omics" methodologies allow us to gain insight into the complex molecular regulatory networks underlying plant responses to environmental stresses. Among the different genome-wide analysis, epigenomics is the most under-investigated "omic" approach requiring more critical and speculative discussion about approaches, methods and experimental designs. Epigenomics allows us to gain insight into the molecular adaptation of plants in response to environmental stresses. The identification of epigenetic marks transmitted during filial generations enables new theories to be developed on the evolution of living organisms in relation to environmental changes. The molecular mechanis…

0106 biological sciences0301 basic medicineCrops AgriculturalEpigenomicsfood and beveragesPlant ScienceGeneral MedicineBiology01 natural sciencesData scienceAdaptation Physiological03 medical and health sciences030104 developmental biologyGene Expression Regulation PlantGeneticsAgronomy and Crop Science010606 plant biology & botanyEpigenomicsPlant science : an international journal of experimental plant biology
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Responsiveness of metallothionein and hemocyanin genes to cadmium and copper exposure in the garden snail Cornu aspersum.

2020

Abstract Terrestrial gastropods express metal‐selective metallothioneins (MTs) by which they handle metal ions such as Zn2+, Cd2+, and Cu+/Cu2+ through separate metabolic pathways. At the same time, they depend on the availability of sufficient amounts of Cu as an essential constituent of their respiratory protein, hemocyanin (Hc). It was, therefore, suggested that in snails Cu‐dependent MT and Hc pathways might be metabolically connected. In fact, the Cu‐specific snail MT (CuMT) is exclusively expressed in rhogocytes, a particular molluscan cell type present in the hemocoel and connective tissues. Snail rhogocytes are also the sites of Hc synthesis. In the present study, possible interacti…

0106 biological sciences0301 basic medicineDNA ComplementaryPhysiologymedicine.medical_treatmentSnailsGastropodaSnailBiology010603 evolutionary biology01 natural sciences03 medical and health sciencesstressbiology.animalGastropodaparasitic diseasesGeneticsmedicineMetallothioneinAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsMetal metabolismBase Sequencefungimetal metabolismMidgutHemocyaninbiology.organism_classificationResearch PapersRespiratory protein030104 developmental biologybioaccumulationBiochemistryGene Expression RegulationMetalsHemocyaninsAnimal Science and ZoologyMetallothioneinCornu aspersumCopperrespirationCadmiumResearch PaperJournal of experimental zoology. Part A, Ecological and integrative physiology
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De novo transcriptome assembly and developmental mode specific gene expression of Pygospio elegans

2017

Species with multiple different larval developmental modes are interesting models for the study of mechanisms underlying developmental mode transitions and life history evolution. Pygospio elegans, a small, tube-dwelling polychaete worm commonly found in estuarine and marine habitats around the northern hemisphere, is one species with variable developmental modes. To provide new genomic resources for studying P. elegans and to address the differences in gene expression between individuals producing offspring with different larval developmental modes, we performed whole transcriptome Illumina RNA sequencing of adult worms from two populations and prepared a de novo assembly of the P. elegans…

0106 biological sciences0301 basic medicineDe novo transcriptome assemblySequence assemblyBiology010603 evolutionary biology01 natural sciencesTranscriptome03 medical and health sciencesGene expressionAnimalsgeeniekspressioGenes Developmental14. Life underwaterEcology Evolution Behavior and SystematicsGeneticsLarvaPolychaeteGene Expression ProfilingfungiGene Expression Regulation DevelopmentalRNAMolecular Sequence AnnotationPolychaetaMarine invertebratesbiology.organism_classification030104 developmental biologyLarvagene expressionta1181TranscriptomeMicrosatellite RepeatsDevelopmental BiologyEvolution & Development
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Tandem‐running and scouting behaviour are characterized by up‐regulation of learning and memory formation genes within the ant brain

2018

Tandem-running is a recruitment behaviour in ants that has been described as a form of teaching, where spatial information possessed by a leader is conveyed to following nestmates. Within Temnothorax ants, tandem-running is used within a variety of contexts, from foraging and nest relocation to-in the case of slavemaking species-slave raiding. Here, we elucidate the transcriptomic basis of scouting, tandem-leading and tandem-following behaviours across two species with divergent lifestyles: the slavemaking Temnothorax americanus and its primary, nonparasitic host T. longispinosus. Analysis of gene expression data from brains revealed that only a small number of unique differentially express…

0106 biological sciences0301 basic medicineForagingGenes Insect010603 evolutionary biology01 natural sciencesRunningTranscriptome03 medical and health sciencesNestMemoryGeneticsAnimalsLearningGeneEcology Evolution Behavior and SystematicsBehavior AnimalTemnothoraxbiologyAntsHost (biology)BrainMolecular Sequence AnnotationTemnothorax americanusbiology.organism_classificationUp-Regulation030104 developmental biologyGene Expression RegulationEvolutionary biologyTandem runningMolecular Ecology
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Ant behaviour and brain gene expression of defending hosts depend on the ecological success of the intruding social parasite.

2019

The geographical mosaic theory of coevolution predicts that species interactions vary between locales. Depending on who leads the coevolutionary arms race, the effectivity of parasite attack or host defence strategies will explain parasite prevalence. Here, we compare behaviour and brain transcriptomes of Temnothorax longispinosus ant workers when defending their nest against an invading social parasite, the slavemaking ant Temnothorax americanus . A full-factorial design allowed us to test whether behaviour and gene expression are linked to parasite pressure on host populations or to the ecological success of parasite populations. Albeit host defences had been shown before to covary with …

0106 biological sciences0301 basic medicineGene ExpressionBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite InteractionsNesting Behavior03 medical and health sciencesEvolutionary arms raceNestParasite hostingAnimalsSocial BehaviorCoevolutionRegulation of gene expressionBrood parasiteEcologyHost (biology)AntsBrainTemnothorax americanusArticlesbiology.organism_classification030104 developmental biologyGeneral Agricultural and Biological SciencesPhilosophical transactions of the Royal Society of London. Series B, Biological sciences
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Colorado potato beetle chymotrypsin genes are differentially regulated in larval midgut in response to the plant defense inducer hexanoic acid or the…

2019

When Colorado potato beetle larvae ingested potato plants treated with the plant defense inducer compound hexanoic acid, midgut chymotrypsin enzyme activity increased, and the corresponding chymotrypsin genes were differentially expressed, evidence of the larval digestive proteolytic system's plasticity. We previously reported increased susceptibility to Cry3Aa toxin in larvae fed hexanoic acid treated plants. Here we show that the most expressed chymotrypsin gene in larvae fed hexanoic acid treated plants, CTR6, was dramatically downregulated in Cry3Aa intoxicated larvae. lde-miR-965-5p and lde-miR-9a-5p microRNAs, predicted to target CTR6, might be involved in regulating the response to h…

0106 biological sciences0301 basic medicineGenes Insectmedicine.disease_cause01 natural sciencesMicrobiologyHemolysin Proteins03 medical and health scienceschemistry.chemical_compoundBacterial ProteinsBacillus thuringiensisPlant defense against herbivorymedicineAnimalsChymotrypsinCaproatesEcology Evolution Behavior and SystematicsSolanum tuberosumHexanoic acidChymotrypsinBacillus thuringiensis ToxinsbiologyToxinfungiColorado potato beetlefood and beveragesMidgutbiology.organism_classificationEnzyme assayColeopteraEndotoxins010602 entomology030104 developmental biologyGene Expression RegulationchemistryLarvabiology.proteinDigestive SystemJournal of Invertebrate Pathology
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The exceptionality of stress response in Magnaporthe oryzae: a set of “salt stress-induced” genes unique to the rice blast fungus

2017

The ability of pathogens to signal perception and adaptation to environmental changes is an important prerequisite for successful colonization of the host organism. Filamentous phytopathogenic fungi, for example, have to cope with rapid changes in the environment during invasive growth in planta. Consequently, they have evolved a range of specific factors contributing to environmental adaptation facilitating host invasion. In addition to conserved pathways, including genes participating in stress response, unique/individual genes within the pathogens might represent determinants of pathogenicity. Therefore, identification of unique genes could provide a set of excellent candidates for novel…

0106 biological sciences0301 basic medicineGeneticsOsmotic shockPlant physiologyFungusPlant ScienceBiologyHorticulturebiology.organism_classification01 natural sciencesYeast03 medical and health sciences030104 developmental biologyOsmolyteBotanyOsmoregulationGeneAgronomy and Crop Science010606 plant biology & botanyInterProScanJournal of Plant Diseases and Protection
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Arabidopsis mutant dnd2 exhibits increased auxin and abscisic acid content and reduced stomatal conductance

2019

Arabidopsis thaliana cyclic nucleotide-gated ion channel gene 4 (AtCNGC4) loss-of-function mutant dnd2 exhibits elevated accumulation of salicylic acid (SA), dwarfed morphology, reduced hypersensitive response (HR), altered disease resistance and spontaneous lesions on plant leaves. An orthologous barley mutant, nec1, has been reported to over-accumulate indole-3-acetic acid (IAA) and to exhibit changes in stomatal regulation in response to exogenous auxin. Here we show that the Arabidopsis dnd2 over-accumulates both IAA and abscisic acid (ABA) and displays related phenotypic and physiological changes, such as, reduced stomatal size, higher stomatal density and stomatal index. dnd2 showed i…

0106 biological sciences0301 basic medicineHypersensitive responseStomatal conductanceDrought stressPhysiologyMutantArabidopsisPlant ScienceBOX PROTEIN TIR101 natural sciencesSIGNALING PATHWAYS03 medical and health scienceschemistry.chemical_compoundBarley nec1Abscisic acidAuxinGene Expression Regulation PlantArabidopsisLESION MIMIC MUTANTSGeneticsDISEASE RESISTANCEAuxinPLANTAbscisic acid1183 Plant biology microbiology virologyGENE-EXPRESSION2. Zero hungerchemistry.chemical_classificationbiologyIndoleacetic AcidsAbiotic stressArabidopsis Proteinsfungifood and beveragesGATED ION CHANNELSHordeumbiology.organism_classificationDroughts030104 developmental biologychemistryArabidopsis dnd2SALT-STRESSPlant StomataBiophysicsINNATE IMMUNITYAIR HUMIDITYSalicylic acid010606 plant biology & botany
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