Search results for "RICH"

showing 10 items of 3360 documents

Comparative high-resolution chemostratigraphy of the Bonarelli Level from the reference Bottaccione section (Umbria-Marche Apennines) and from an equ…

2006

The Bonarelli Level (BL) from the upper Cenomanian portion of the reference Bottaccione section (central Italy) is characterized by the presence of black shales containing high TOC concentrations (up to 17%) and amounts of CaCO3 near to zero. In the absence of carbonate and, consequently, of relative carbon- and oxygen-isotopic data, the elemental geochemistry revealed to be a very useful tool to obtain information about the palaeoclimatic and palaeoceanographic evolution of the Tethys Ocean during the OAE2. Based on several geochemical proxies (Rb, V, Ni, Cr, Si, Ba), the BL is interpreted as a high-productivity event driven by increasingly warm and humid climatic conditions promoting an a…

chemistry.chemical_classification010506 paleontologyCretaceous Umbria–Marche Apennines Sicily Corg-rich deposits Bonarelli Level Geochemical proxies PalaeoceanographyGeology15. Life on land010502 geochemistry & geophysicsTethys Ocean01 natural sciencesCretaceousSeafloor spreadingDeposition (geology)chemistry.chemical_compoundPaleontologychemistry13. Climate actionGeochemistry and PetrologyChemostratigraphy[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyCarbonateOrganic matterCenomanianGeology0105 earth and related environmental sciences
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EFFECTS OF SENSITIZED AND UNSENSITIZED LONGWAVE U.V.-IRRADIATION ON THE SOLUTION PROPERTIES OF DNA

1971

— Two types of photoreactions occur in DNA irradiated in aqueous systems with longwave u.v.-light (Λ > 295 nm), namely, (a) thymine dimerization, and (b) single- and double-strand breakage of the sugar phosphate backbone; these two reactions are unrelated. The presence of acetophenone as a photosensitizer caused an increase in dimerization by a factor of 16, and an increase in single-strand breaks by a factor of 4. The number of thymine dimers per single-strand break is about 100 in the sensitized and 25 in the unsensitized reaction. The alteration of the radius of gyration of DNA molecules is that expected by the degradation observed. At the same time the change in hyperchromicity is very …

chemistry.chemical_classificationCarbon IsotopesAqueous solutionSugar phosphatesUltraviolet RaysHyperchromicityPyrimidine dimerDNAGeneral MedicinePhotochemistryBiochemistryThymineRadiation Effectschemistry.chemical_compoundchemistryEscherichia coliRadius of gyrationPhotosensitizerPhysical and Theoretical ChemistryThymineDNAPhotochemistry and Photobiology
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Über die Verbreitung von Flavonoiden bei akrokarpen Laubmoosen

1978

Summary The methanolic extract from the sporophytes of the moss Ceratodon purpureus (L.) Brid . (Ditrichaceae) contains one flavonoid. It was isolated and purified by means of paper chromatography and identified by cochromatography with authentic material and by UV-spectral data as luteolin. No glycosides of either luteolin or another flavonoid could be detected.

chemistry.chemical_classificationCeratodon purpureusbiologyFlavonoidGlycosideSporophyteGeneral MedicineDitrichaceaebiology.organism_classificationMossPaper chromatographychemistry.chemical_compoundchemistryBotanyLuteolinZeitschrift für Pflanzenphysiologie
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Enzymatic and Chemo-Enzymatic Approaches Towards Natural and Non-Natural Alkaloids: Indoles, Isoquinolines, and Others

2010

Abstract The multi-step enzyme catalysed biosyntheses of monoterpenoid indole and isoquinoline alkaloids are described. Special emphasis is placed on those pathways leading to alkaloids of pharmacological and medicinal significance which have been fully elucidated at the enzyme level. The successful identification and cloning of cDNAs of single enzymes and their application provides great opportunities to develop novel strategies for both in vitro and in vivo alkaloid production in whole plants or tissue cultures, as well as in microbial systems such as Escherichia coli and yeast. Enzyme crystallisation, 3D analyses and site-directed mutation allowed rational engineering of enzyme substrate…

chemistry.chemical_classificationCloningIndole testendocrine systemorganic chemicalsAlkaloidSubstrate (chemistry)medicine.disease_causecomplex mixturesYeastchemistry.chemical_compoundEnzymechemistryBiochemistrymedicineheterocyclic compoundsIsoquinolineEscherichia coli
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Human neuroglobin: crystals and preliminary X-ray diffraction analysis

2002

Neuroglobin, a recently discovered member of the haemoglobin superfamily, is primarily expressed in the brain of humans and other vertebrates, where it has been proposed to enhance O(2) supply in response to hypoxia or ischaemia, protecting the neuron from hypoxic injury. Neuroglobin is the first example of a vertebrate haemoglobin in which a hexacoordinate haem geometry has been detected. A triple mutant (replacing three Cys residues) of human neuroglobin (151 amino acids) has been expressed in Escherichia coli, purified and crystallized in two crystal forms, the best of which diffracts to 1.95 A resolution using synchrotron radiation. The crystals belong to space group P2(1), with unit-ce…

chemistry.chemical_classificationCrystallographyProtein moleculesResolution (electron density)HexacoordinateNeuroglobinNerve Tissue ProteinsGeneral MedicineBiologymedicine.disease_causeRecombinant ProteinsAmino acidGlobinsCrystalCrystallographychemistryX-Ray DiffractionStructural BiologyNeuroglobinX-ray crystallographymedicineHumansEscherichia coli
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C4-dicarboxylate metabolons: Interaction of C4-dicarboxylate transporters of Escherichia coli with cytosolic enzymes

2021

AbstractMetabolons represent the structural organization of proteins for metabolic or regulatory pathways. Here the interaction of enzymes fumarase FumB and aspartase AspA with the C4-DC transporters DcuA and DcuB of Escherichia coli was tested by a bacterial two-hybrid (BACTH) assay in situ, or by co-chromatography (mSPINE). DcuB interacted strongly with FumB and AspA, and DcuA with AspA. The fumB-dcuB and the dcuA-aspA genes encoding the respective proteins are known for their colocalization on the genome and the production of co-transcripts. The data consistently suggest the formation of DcuB/FumB, DcuB/AspA and DcuA/AspA metabolons in fumarate respiration for the uptake of L-malate, or …

chemistry.chemical_classificationCytosolEnzymechemistryBiochemistryFumaraseNitrogen assimilationmedicineTransporterMetabolonmedicine.disease_causeGeneEscherichia coli
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Sequence-specific and DNA structure-dependent interactions of Escherichia coli MutS and human p53 with DNA

2013

Many proteins involved in DNA repair systems interact with DNA that has structure altered from the typical B-form helix. Using magnetic beads to immobilize DNAs containing various types of structures, we evaluated the in vitro binding activities of two well-characterized DNA repair proteins, Escherichia coli MutS and human p53. E. coli MutS bound to double-stranded DNAs, with higher affinity for a G/T mismatch compared to a G/A mismatch and highest affinity for larger non-B-DNA structures. E. coli MutS bound best to DNA between pH 6 and 9. Experiments discriminated between modes of p53-DNA binding, and increasing ionic strength reduced p53 binding to nonspecific double-stranded DNA, but had…

chemistry.chemical_classificationDNA ligaseDNA clampHMG-boxBase pairEscherichia coli ProteinsOsmolar ConcentrationBiophysicsDNACell BiologyBiologyBiochemistryMutS DNA Mismatch-Binding ProteinDNA binding siteBiochemistrychemistryMutS-1Escherichia coliHumansNucleic Acid ConformationProtein–DNA interactionAmino Acid SequenceTumor Suppressor Protein p53Molecular BiologyReplication protein AAnalytical Biochemistry
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High yield recombinant production of a self-assembling polycationic peptide for silica biomineralization.

2015

We report the recombinant bacterial expression and purification at high yields of a polycationic oligopeptide, P5S3. The sequence of P5S3 was inspired by a diatom silaffin, a silica precipitating peptide. Like its native model, P5S3 exhibits silica biomineralizing activity, but furthermore has unusual self-assembling properties. P5S3 is efficiently expressed in Escherichia coli as fusion with ketosteroid isomerase (KSI), which causes deposition in inclusion bodies. After breaking the fusion by cyanogen bromide reaction, P5S3 was purified by cation exchange chromatography, taking advantage of the exceptionally high content of basic amino acids. The numerous cationic charges do not prevent, b…

chemistry.chemical_classificationDiatomsOligopeptideIon chromatographyPeptideIsomerasemedicine.disease_causeSilicon DioxideRecombinant Proteinslaw.inventionchemistry.chemical_compoundchemistryBiochemistrylawmedicineRecombinant DNAEscherichia coliCyanogen bromideEscherichia coliOligopeptidesBiotechnologyBiomineralizationProtein expression and purification
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Metabolism of Linoleic Acid or Mevalonate and 6-Pentyl-α-Pyrone Biosynthesis by Trichoderma Species

1993

The understanding of the biosynthetic pathway of 6-pentyl-α-pyrone in Trichoderma species was achieved by using labelled linoleic acid or mevalonate as a tracer. Incubation of growing cultures of Trichoderma harzianum and T. viride with [U- 14 C]linoleic acid or [5- 14 C]sodium mevalonate revealed that both fungal strains were able to incorporate these labelled compounds (50 and 15%, respectively). Most intracellular radioactivity was found in the neutral lipid fraction. At the initial time of incubation, the radioactivity from [ 14 C]linoleic acid was incorporated into 6-pentyl-α-pyrone more rapidly than that from [ 14 C]mevalonate. No radioactivity incorporation was detected in 6-pentyl-…

chemistry.chemical_classificationEcologybiologyStereochemistryLinoleic acidTrichoderma virideTrichoderma harzianumMycologyMetabolismbiology.organism_classificationApplied Microbiology and BiotechnologyPyronechemistry.chemical_compoundBiosynthesischemistryBiochemistryIncubationLactoneFood ScienceBiotechnologyApplied and Environmental Microbiology
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Enzymatic activity of circular sortase A under denaturing conditions: An advanced tool for protein ligation

2014

Abstract Staphylococcus aureus sortase A is a transpeptidase that is extensively used in various protein research applications. Sortase A is highly selective and does not require any cofactors for the catalysis of protein ligation and, importantly, can be produced in high yields. However, the primary disadvantage of this transpeptidase is its inability to access the recognition site within the highly structured regions of folded substrates. To overcome this problem, we developed an Escherichia coli expression system that produces milligram quantities of circularly closed sortase A; efficient enzyme cyclization was achieved by Synechocystis sp. PCC6803 intein-mediated post-translational spli…

chemistry.chemical_classificationEnvironmental EngineeringBiomedical EngineeringSubstrate (chemistry)BioengineeringProtein engineeringBiologymedicine.disease_causeCofactorchemistry.chemical_compoundEnzymechemistryBiochemistrySortaseSortase Amedicinebiology.proteinEDANSEscherichia coliBiotechnologyBiochemical Engineering Journal
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