Search results for "RIO"

showing 10 items of 19845 documents

Phage Therapy in Gastrointestinal Diseases

2020

Gastrointestinal tract microbiota plays a key role in the regulation of the pathogenesis of several gastrointestinal diseases. In particular, the viral fraction, composed essentially of bacteriophages, influences homeostasis by exerting a selective pressure on the bacterial communities living in the tract. Gastrointestinal inflammatory diseases are mainly induced by bacteria, and have risen due to the emergence of antibiotic resistant strains. In the lack of effective treatments, phage therapy has been proposed as a clinical alternative to restore intestinal eubiosis, thanks to its immunomodulatory and bactericidal effect against bacterial pathogens, such as Clostridioides difficile in ulce…

0301 basic medicineMicrobiology (medical)phage therapyPhage therapymedicine.medical_treatment030106 microbiologymicrobiomeReviewBiologymedicine.disease_causeMicrobiologyMicrobiologyBacteriophage03 medical and health sciencesAntibiotic resistancebacteriophageVirologymedicineHuman viromeMicrobiomelcsh:QH301-705.5Escherichia coliviromeGastrointestinal tractdysbiosismedicine.diseasebiology.organism_classification030104 developmental biologylcsh:Biology (General)gastrointestinal tractDysbiosisMicroorganisms
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Detection of Viral −RNA and +RNA Strands in Enterovirus-Infected Cells and Tissues

2020

The current methods to study the distribution and dynamics of viral RNA molecules inside infected cells are not ideal, as electron microscopy and immunohistochemistry can only detect mature virions, and quantitative real-time PCR does not reveal localized distribution of RNAs. We demonstrated here the branched DNA in situ hybridization (bDNA ISH) technology to study both the amount and location of the emerging &minus

0301 basic medicineMicrobiology (medical)replication030106 microbiologyCellIn situ hybridizationBiologybranched DNAmedicine.disease_causeinfektiotMicrobiologyArticleantiviral drugs03 medical and health scienceschemistry.chemical_compoundpositive RNAVirologymedicineBDNA testlcsh:QH301-705.5replikaatioenterovirusvirus diseasesRNATranslation (biology)negative RNAVirologyenterovirukset030104 developmental biologymedicine.anatomical_structurelcsh:Biology (General)chemistryVirion assemblyRNAEnterovirusin situ hybridization3111 BiomedicineDNAMicroorganisms
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Comprehensive identification of Vibrio vulnificus genes required for growth in human serum.

2018

ABSTRACT Vibrio vulnificus can be a highly invasive pathogen capable of spreading from an infection site to the bloodstream, causing sepsis and death. To survive and proliferate in blood, the pathogen requires mechanisms to overcome the innate immune defenses and metabolic limitations of this host niche. We created a high-density transposon mutant library in YJ016, a strain representative of the most virulent V. vulnificus lineage (or phylogroup) and used transposon insertion sequencing (TIS) screens to identify loci that enable the pathogen to survive and proliferate in human serum. Initially, genes underrepresented for insertions were used to estimate the V. vulnificus essential gene set;…

0301 basic medicineMicrobiology (medical)septicaemiatransposon insertion sequencing (TIS)capsuleImmunologyVirulenceVibrio vulnificusMicrobiologylcsh:Infectious and parasitic diseasesMicrobiology03 medical and health sciencesMiceBacterial ProteinsAnimalsHumanslcsh:RC109-216GenePathogenVibrio vulnificusMice Inbred BALB CInnate immune systembiologyType II secretion systemVirulencebiology.organism_classificationVibrio3. Good health030104 developmental biologyInfectious DiseasesBloodEssential geneVibrio InfectionsDNA Transposable ElementsParasitologyFemaleresistance to human complementResearch ArticleVirulence
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Multi-virion infectious units arise from free viral particles in an enveloped virus

2017

Many animal viruses are enveloped in a lipid bilayer uptaken from cellular membranes. Since viral surface proteins bind to these membranes to initiate infection, we hypothesized that free virions may also be capable of interacting with the envelopes of other virions extracellularly. Here, we demonstrate this hypothesis in the vesicular stomatitis virus (VSV), a prototypic negative-strand RNA virus composed by an internal ribonucleocapsid, a matrix protein, and an external envelope1. Using microscopy, dynamic light scattering, differential centrifugation, and flow cytometry, we show that free viral particles can spontaneously aggregate into multi-virion infectious units. We also show that, f…

0301 basic medicineMicrobiology (medical)viruses030106 microbiologyImmunologyVirus AttachmentCentrifugationPhosphatidylserinesPlasma protein bindingBiologyApplied Microbiology and BiotechnologyMicrobiologyArticle03 medical and health sciencesViral Envelope ProteinsViral envelopeGeneticsLipid bilayerDifferential centrifugationchemistry.chemical_classificationViral matrix proteinVirionRNA virusVesiculovirusCell BiologyFlow Cytometrybiology.organism_classificationVirologyDynamic Light Scattering3. Good healthMicroscopy Electron030104 developmental biologychemistryVesicular stomatitis virusGlycoproteinProtein BindingNature Microbiology
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Collective Infectious Units in Viruses

2017

Increasing evidence indicates that viruses do not simply propagate as independent virions among cells, organs, and hosts. Instead, viral spread is often mediated by structures that simultaneously transport groups of viral genomes, such as polyploid virions, aggregates of virions, virion-containing proteinaceous structures, secreted lipid vesicles, and virus-induced cell-cell contacts. These structures increase the multiplicity of infection, independently of viral population density and transmission bottlenecks. Collective infectious units may contribute to the maintenance of viral genetic diversity, and could have implications for the evolution of social-like virus-virus interactions. These…

0301 basic medicineMicrobiology (medical)virusesBiologyMicrobiologyArticle03 medical and health sciencesMultiplicity of infectionImmunityVirologyAnimalsGeneticsGenetic diversityVirionGenetic VariationBiological EvolutionVirologyMicrovesiclesComplementation030104 developmental biologyInfectious DiseasesVirus DiseasesViral genomesViral spreadLipid vesicleBaculoviridaeTrends in Microbiology
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C2orf69 mutations disrupt mitochondrial function and cause a multisystem human disorder with recurring autoinflammation

2021

BACKGROUND. Deciphering the function of the many genes previously classified as uncharacterized open reading frame (ORF) would complete our understanding of a cell’s function and its pathophysiology. METHODS. Whole-exome sequencing, yeast 2-hybrid and transcriptome analyses, and molecular characterization were performed in this study to uncover the function of the C2orf69 gene. RESULTS. We identified loss-of-function mutations in the uncharacterized C2orf69 gene in 8 individuals with brain abnormalities involving hypomyelination and microcephaly, liver dysfunction, and recurrent autoinflammation. C2orf69 contains an N-terminal signal peptide that is required and sufficient for mitochondrial…

0301 basic medicineMicrocephalyRespiratory chainBiologyMitochondrionCell LineMitochondrial ProteinsTranscriptomeMiceOpen Reading Frames03 medical and health sciencesAll institutes and research themes of the Radboud University Medical Center0302 clinical medicineLoss of Function MutationGlycogen branching enzymemedicineAnimalsHumansGeneMice KnockoutGeneticsMetabolic Disorders Radboud Institute for Molecular Life Sciences [Radboudumc 6]Glycogen Debranching Enzyme SystemGeneral Medicinemedicine.diseaseMitochondriaOpen reading frameRenal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11]030104 developmental biology030220 oncology & carcinogenesisMicrocephalybiology.proteinClinical MedicineSignal transductionGlycogenJournal of Clinical Investigation
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MTA apical barrier: In vitro study of the use of ultrasonic vibration

2016

Background: The apexification is the first alternative treatment on a permanent tooth when, after a tooth trauma and in the presence of immature apex trauma, pulp necrosis occurs. Many studies have demonstrated the efficacy of mineral trioxide aggregate (MTA) as apical sealing material of choice in these cases, but has a degree of filtration as all other materials. The objective of this study was to analyze the seal ability of MTA on the duct walls in immature teeth unirradicular apexes, using indirect vibration. Material and Methods: The study was conducted on 45 teeth divided into 3 groups: Group A or control group in which no vibration for placing the MTA was used, Group B and C or group…

0301 basic medicineMineral trioxide aggregateMateriales dentalesDentistryOdontologíaUltrasonidos en medicinaOperative Dentistry and Endodontics03 medical and health sciences0302 clinical medicinestomatognathic systemUltrasonic vibrationIn vitro studyTecnología médicaGeneral DentistryPulp necrosisPermanent toothChemistrybusiness.industryResearch030206 dentistry:CIENCIAS MÉDICAS [UNESCO]Ciencias de la saludAlternative treatmentstomatognathic diseases030104 developmental biologyUNESCO::CIENCIAS MÉDICASApexificationbusinessJournal of Clinical and Experimental Dentistry
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Vertical root fracture resistance of simulated immature permanent teeth filled with MTA using different vehicles

2017

Background The aim of the study is to evaluate the resistance vertical root fracture (VRF) of mineral trioxide aggregate (MTA) filled-immature permanent roots by using three different vehicles. Material and Methods Forty-extracted human single-rooted mandibular premolars were selected and the root length was standardized to the length of 9 mm. For simulation of immature tooth apices, peeso reamers were introduced into the root canals and the prepared roots were assigned into three experimental groups according the used vehicle (distilled water-DW, prophylene glycol-PG, chlorhexidine-CHX) and control group (n=10). To simulate a periodontal membrane, the apical 7 mm of all roots was covered w…

0301 basic medicineMineral trioxide aggregateMaterials scienceDentistryOdontologíaOperative Dentistry and Endodontics03 medical and health sciences0302 clinical medicineVertical root fractureFlexural strengthmedicineStatistical analysisGeneral DentistryPermanent teethUniversal testing machinebusiness.industryResearch030206 dentistryTooth Apexmedicine.disease:CIENCIAS MÉDICAS [UNESCO]Ciencias de la salud030104 developmental biologyUNESCO::CIENCIAS MÉDICASFracture (geology)business
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Evaluation of cytocompatibility of calcium silicate-based endodontic sealers and their effects on the biological responses of mesenchymal dental stem…

2015

Aim To investigate in vitro the cytocompatibility of the calcium silicate-containing endodontic sealers MTA Fillapex and TotalFill BC Sealer on human periodontal ligament stem cells (hPDLSCs) by assaying their biological responses and compare them with that observed when using an epoxy resin-based sealer (AH Plus). Methodology Specimens from the three different endodontic sealers were eluated with culture medium for 24 h. The cytotoxicity of these eluates was evaluated using the MTT assay. In addition, an in vitro scratch wound healing model was used to determine their effects on cell migration. Cell adhesion to collagen type I after treatment with the different sealer eluates was also meas…

0301 basic medicineMineral trioxide aggregateMaterials sciencePeriodontal ligament stem cellsCell SurvivalPeriodontal LigamentCell morphologyAndrologyRoot Canal Filling Materials03 medical and health sciences0302 clinical medicineCell MovementMaterials TestingCell AdhesionHumansMTT assayCytotoxicityGeneral DentistryCells CulturedCell ProliferationCell growthSilicatesStem CellsMesenchymal stem cell030206 dentistryAdhesionCalcium Compounds030104 developmental biologyBiomedical engineeringInternational endodontic journal
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The effects of silver nanoparticles on antimicrobial activity of ProRoot mineral trioxide aggregate (MTA) and calcium enriched mixture (CEM)

2016

Background: Although, mineral trioxide aggregate (MTA) and new experimental cement (CEM) are good root filling cements, but had no or low antimicrobial activities. The aim of this study was to evaluate the effects of addition of silver nanoparticles (SNP) to these two cements on antimicrobial effects against five most dental infection related microorganisms. Material and Methods: Two suspensions of 100 and 200 ppm of SNP were prepared and 180 μl of microbial suspension with 1.5 × 10 8 CFU/ml of each respected microorganisms were re-suspended in deionized water or each of SNP suspensions. After that, 60 μg of MTA and CEM were added to each tube. In one tube, the mixture of all above mentione…

0301 basic medicineMineral trioxide aggregateMicroorganismDentistryOdontologíaEnterococcus faecalisSilver nanoparticleAgar plate03 medical and health sciences0302 clinical medicineBiomaterials and Bioengineering in DentistryFood scienceGeneral DentistryCementbiologybusiness.industryChemistryResearch030206 dentistrybiology.organism_classificationAntimicrobial:CIENCIAS MÉDICAS [UNESCO]Ciencias de la salud030104 developmental biologyUNESCO::CIENCIAS MÉDICASAntibacterial activitybusiness
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