Search results for "ROT"

showing 10 items of 41723 documents

Heavy enzymes and the rational redesign of protein catalysts

2019

Abstract An unsolved mystery in biology concerns the link between enzyme catalysis and protein motions. Comparison between isotopically labelled “heavy” dihydrofolate reductases and their natural‐abundance counterparts has suggested that the coupling of protein motions to the chemistry of the catalysed reaction is minimised in the case of hydride transfer. In alcohol dehydrogenases, unnatural, bulky substrates that induce additional electrostatic rearrangements of the active site enhance coupled motions. This finding could provide a new route to engineering enzymes with altered substrate specificity, because amino acid residues responsible for dynamic coupling with a given substrate present…

010402 general chemistryProtein Engineering01 natural sciencesBiochemistryCatalysisEnzyme catalysisisotope effectsCatalytic DomainDihydrofolate reductaseMolecular BiologyAlcohol dehydrogenasechemistry.chemical_classificationalcohol dehydrogenasesCarbon Isotopesdihydrofolate reductasesbiologyBacteriaNitrogen Isotopes010405 organic chemistryConceptOrganic ChemistryAlcohol DehydrogenaseActive siteSubstrate (chemistry)Protein engineeringDeuteriumCombinatorial chemistrymolecular dynamics0104 chemical sciencesKineticsTetrahydrofolate Dehydrogenaseenzyme engineeringEnzymechemistrybiology.proteinBiocatalysisMolecular MedicineConcepts
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High-resolution rovibrational spectroscopy of c-C3H2+: The ν7 C–H antisymmetric stretching band

2020

Abstract The ν 7 antisymmetric C–H stretching fundamental of c- C 3 H 2 + has been characterized in a cryogenic 22-pole ion trap by a novel type of action spectroscopy, in which the rovibrational excitation of c- C 3 H 2 + is detected as a slowing down of the low-temperature reaction c- C 3 H 2 +  + H2 → C 3 H 3 + + H. Ninety-one rovibrational transitions with partly resolved fine structure doublets were measured in high resolution. Supported by high-level quantum chemical calculations, spectroscopic parameters were determined by fitting the observed lines with an effective Hamiltonian for an asymmetric rotor in a doublet electronic ground state, X ˜ A 1 2 , yielding a band origin at 3113.6…

010405 organic chemistryAntisymmetric relationChemistryOrganic ChemistryRotational–vibrational spectroscopy010402 general chemistry01 natural sciencesMolecular physics0104 chemical sciencesAnalytical ChemistryInorganic Chemistrysymbols.namesakesymbolsMoleculeIon trapGround stateHamiltonian (quantum mechanics)SpectroscopySpectroscopyExcitationJournal of Molecular Structure
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Palladium-catalyzed amination of aryl dibromides with secondary amines: synthetic and mechanistic aspects

1999

Abstract Diaminobenzenes are obtained starting from m- and p-dibromobenzenes and secondary amines in the presence of Pd(dba)2/P(o-tolyl)3and sodium tert-butoxide in moderate to good yields. Reductive dehalogenation of aryl dibromides is a major side reaction under these conditions. The study of this reaction has shown that the formation of reductive dehalogenation products occurs according to two independent ways. The first one proceeds via the well-known β-hydride elimination from amido-coordinated palladium complexes. The second one involves the formation of hydrido palladium complexes from amino-coordinated derivatives. Although our results do not allow us to propose a detailed mechanist…

010405 organic chemistryChemistryArylOrganic ChemistrySide reactionHalogenationchemistry.chemical_element010402 general chemistry01 natural sciencesBiochemistryCombinatorial chemistry0104 chemical sciencesCatalysischemistry.chemical_compoundDeprotonationDrug Discovery[CHIM]Chemical SciencesOrganic chemistryComputingMilieux_MISCELLANEOUSAminationPalladiumTetrahedron Letters
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Electrostatic complementarity in pseudoreceptor modeling based on drug molecule crystal structures: the case of loxistatin acid (E64c)

2015

After a long history of use as a prototype cysteine protease inhibitor, the crystal structure of loxistatin acid (E64c) is finally determined experimentally using intense synchrotron radiation, providing insight into how the inherent electronic nature of this protease inhibitor molecule determines its biochemical activity. Based on the striking similarity of its intermolecular interactions with those observed in a biological environment, the electrostatic potential of crystalline E64c is used to map the characteristics of a pseudo-enzyme pocket.

010405 organic chemistryChemistryIntermolecular forceGeneral ChemistryCrystal structureBiochemical Activity010402 general chemistry01 natural sciencesCysteine proteaseCatalysisProtease inhibitor (biology)0104 chemical sciencesCrystallographyLoxistatinComplementarity (molecular biology)Materials ChemistrymedicineMoleculemedicine.drugNew Journal of Chemistry
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NMR T1-Relaxation Measurements on Paramagnetic Organolanthanides: An Alternative Tool for Structure Determination in Solution

2005

1H NMR investigations were conducted on four paramagnetic organolanthanides, all bearing the tetraisopropylcyclopentadienyl ligand Cp4i (HC5iPr4) in order to verify whether or not interactions observed in the solid state are maintained in solution. In some cases variable-temperature experiments were necessary to enhance the resolution and determine the best conditions for the study. The 1D NMR spectrum could be interpreted in every case. Complementary 2D COSY experiments allowed the full attribution of the signals. T1 (1H) relaxation values were determined for all the paramagnetic complexes at the most suitable temperature, and compared with those of the diamagnetic KCp4i. The same tendency…

010405 organic chemistryChemistryLigandRelaxation (NMR)Analytical chemistrySpin–lattice relaxation[ CHIM.COOR ] Chemical Sciences/Coordination chemistryNuclear magnetic resonance spectroscopy010402 general chemistry01 natural sciences0104 chemical sciencesParamagnetic complexesInorganic Chemistrychemistry.chemical_compoundParamagnetismCrystallographyNMR spectroscopyOxidation stateLanthanidesProton NMR[CHIM.COOR]Chemical Sciences/Coordination chemistryMethyl groupSpin-lattice relaxation times
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Leaded Bronze: An Innovative Lead Substitute for Cathodic Electrosynthesis

2017

010405 organic chemistryChemistryMetallurgychemistry.chemical_elementengineering.material010402 general chemistryElectrosynthesis01 natural sciencesCopperCatalysis0104 chemical sciencesCathodic protectionLead (geology)ElectrochemistryengineeringBronzeChemElectroChem
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A Strongly Luminescent Chromium(III) Complex Acid

2018

The synthesis, structure, reactivity, and photophysical properties of a novel acidic, luminescent chromium(III) complex [Cr(H2 tpda)2 ]3+ (23+ ) bearing the tridentate H2 tpda (2,6-bis(2-pyridylamino)pyridine) ligand are presented. Excitation of 23+ at 442 nm results in strong, long-lived NIR luminescence at 782 nm in water and in acetonitrile. X-ray diffraction analysis and IR spectroscopy reveal hydrogen-bonding interactions of the counter ions to the NH groups of 23+ in the solid state. Deprotonation of the NH groups of 23+ by using a non-nucleophilic Schwesinger base in CH3 CN switches off the luminescence. Re-protonation by using HClO4 restores the emission. In water, the pKa value of …

010405 organic chemistryChemistryOrganic ChemistryQuantum yieldInfrared spectroscopychemistry.chemical_elementGeneral Chemistry010402 general chemistryPhotochemistry01 natural sciencesCatalysis0104 chemical scienceschemistry.chemical_compoundChromiumDeprotonationPyridineHydroxideLuminescenceAcetonitrileChemistry - A European Journal
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Protonation and Electrochemical Properties of Pyridyl- and Sulfonatophenyl-Substituted Porphyrins in Nonaqueous Media

2017

International audience; The protonation and electrochemical properties of positively charged and negatively charged porphyrins are reported in up to five different nonaqueous solvents. The positively charged porphyrins are represented by mono- and di-pyridyl derivatives having the formula Pyx(PhMe)4-xPM, where P=the dianion of the porphyrin macrocycle, PhMe is a meso-tolyl group, Py a meso-pyridyl group, x=1 or 2, and M=H2, NiII, CuII, ZnII, or CoII. The negatively charged porphyrins are comprised of meso-tetrasulfonato derivatives having the formula [(R)4(TPPS)H2]4−(X+)4, where [(TPPS)H2]4− represents the porphyrin with four SO3− groups on the meso-phenyl substituents of the macrocycle, R=…

010405 organic chemistryChemistryProtonation010402 general chemistryPhotochemistryElectrochemistry[ CHIM ] Chemical Sciences01 natural sciencesMedicinal chemistryPorphyrinRedoxCatalysis0104 chemical sciencesSolventchemistry.chemical_compoundPEG ratioElectrochemistryTrifluoroacetic acid[CHIM]Chemical SciencesTitrationChemElectroChem
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Role of the Open-Shell Character on the Pressure-Induced Conductivity of an Organic Donor-Acceptor Radical Dyad

2018

Single‐component conductors based on neutral organic radicals have received a lot of attention due to the possibility that the unpaired electron can serve as a charge carrier without the need of a previous doping process. Although most of these systems are based on delocalized planar radicals, we present here a nonplanar and spin localized radical based on a tetrathiafulvalene (TTF) moiety, linked to a perchlorotriphenylmethyl (PTM) radical by a conjugated bridge, which exhibits a semiconducting behavior upon application of high pressure. The synthesis, electronic properties, and crystal structure of this neutral radical TTF‐Ph‐PTM derivative (1) are reported and implications of its crystal…

010405 organic chemistryChemistryRadicalOrganic ChemistryGeneral ChemistryOrganic radical010402 general chemistry01 natural sciencesCatalysisDonor-acceptor3. Good health0104 chemical sciencesSingle-component conductorDelocalized electronchemistry.chemical_compoundCrystallographyUnpaired electronTetrathiafulvaleneCharge carrierIsostructuralElectronic band structureOpen shellPolychlorotriphenylmethylTetrathiafulvaleneChemistry - A European Journal
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Conformational Switching of Multi-Responsive Ferrocenyl-Phenol Conjugates

2016

Multifunctional conformational switches based on the ferrocenyl-salicylic acid amide motif with increasing additional complexity at the Fc moiety (R = COOMe, CONHEt, CONHFc; H-2–H-4; Fc = ferrocenyl) have been prepared and their preferred secondary structures in solution have been elucidated by NMR and IR spectroscopy in combination with conformational searches based on DFT calculations. Their distinct conformational responses to deprotonation ([2]––[4]–) and oxidation ([H-2]+·–[H-4]+·) have been revealed by IR, EPR, and UV/Vis spectroscopy as well as by DFT calculations. Deprotonation inverts all amide units (double amide twist) whereas oxidation selectively flips the terminal amide unit (…

010405 organic chemistryChemistryStereochemistryOrganic ChemistryInfrared spectroscopy010402 general chemistry01 natural sciences0104 chemical scienceslaw.inventionchemistry.chemical_compoundDeprotonationlawAmideMoietyPhenolPhenolsPhysical and Theoretical ChemistryElectron paramagnetic resonanceSpectroscopyEuropean Journal of Organic Chemistry
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